RNA–Protein interactions for RNA: ENST00000528930.5

SSBP3-212, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 1 (best)

Gene SSBP3, Length 862 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-212ENST00000528930 FZD10Q9ULW2 581 aa8.61□□□□□ -1.03
SSBP3-212ENST00000528930 SCML1Q9UN30 329 aa8.61□□□□□ -1.03
SSBP3-212ENST00000528930 LUC7L2Q9Y383 392 aaKnown RBP8.61□□□□□ -1.03
SSBP3-212ENST00000528930 BZW2Q9Y6E2 419 aaKnown RBP8.61□□□□□ -1.03
SSBP3-212ENST00000528930 ARHGEF17Q96PE2 2063 aaPredicted RBP8.6□□□□□ -1.03
SSBP3-212ENST00000528930 A0A1W2PP55 124 aa8.6□□□□□ -1.03
SSBP3-212ENST00000528930 ANKRD62A6NC57 917 aa8.6□□□□□ -1.03
SSBP3-212ENST00000528930 RNF103O00237 685 aa8.6□□□□□ -1.03
SSBP3-212ENST00000528930 MCF2LO15068 1137 aa8.6□□□□□ -1.03
SSBP3-212ENST00000528930 YKT6O15498 198 aa8.6□□□□□ -1.03
SSBP3-212ENST00000528930 DIAPH2O60879 1101 aa8.6□□□□□ -1.03
SSBP3-212ENST00000528930 RNASEH1O60930 286 aaKnown RBP8.6□□□□□ -1.03
SSBP3-212ENST00000528930 CSO75390 466 aaKnown RBP8.6□□□□□ -1.03
SSBP3-212ENST00000528930 SEMA4FO95754 770 aa8.6□□□□□ -1.03
SSBP3-212ENST00000528930 SERPING1P05155 500 aa8.6□□□□□ -1.03
SSBP3-212ENST00000528930 ITGAVP06756 1048 aa8.6□□□□□ -1.03
SSBP3-212ENST00000528930 PRF1P14222 555 aa8.6□□□□□ -1.03
SSBP3-212ENST00000528930 C5AR1P21730 350 aa8.6□□□□□ -1.03
SSBP3-212ENST00000528930 MSNP26038 577 aaKnown RBP8.6□□□□□ -1.03
SSBP3-212ENST00000528930 HNRNPH3P31942 346 aaKnown RBP8.6□□□□□ -1.03
SSBP3-212ENST00000528930 CASP14P31944 242 aa8.6□□□□□ -1.03
SSBP3-212ENST00000528930 L1CAMP32004 1257 aa8.6□□□□□ -1.03
SSBP3-212ENST00000528930 ACVRL1P37023 503 aa8.6□□□□□ -1.03
SSBP3-212ENST00000528930 MAPKAPK2P49137 400 aa8.6□□□□□ -1.03
SSBP3-212ENST00000528930 METAP1P53582 386 aa8.6□□□□□ -1.03
SSBP3-212ENST00000528930 AIF1P55008 147 aa8.6□□□□□ -1.03
SSBP3-212ENST00000528930 ARF5P84085 180 aa8.6□□□□□ -1.03
SSBP3-212ENST00000528930 GNA12Q03113 381 aa8.6□□□□□ -1.03
SSBP3-212ENST00000528930 ELAVL3Q14576 367 aaKnown RBP8.6□□□□□ -1.03
SSBP3-212ENST00000528930 TTC31Q49AM3 519 aaPredicted RBP8.6□□□□□ -1.03
SSBP3-212ENST00000528930 ACCSLQ4AC99 568 aa8.6□□□□□ -1.03
SSBP3-212ENST00000528930 SCYL2Q6P3W7 929 aa8.6□□□□□ -1.03
SSBP3-212ENST00000528930 CYP4V2Q6ZWL3 525 aaPredicted RBP8.6□□□□□ -1.03
SSBP3-212ENST00000528930 TMC6Q7Z403 805 aa8.6□□□□□ -1.03
SSBP3-212ENST00000528930 DRC7Q8IY82 874 aa8.6□□□□□ -1.03
SSBP3-212ENST00000528930 AADATQ8N5Z0 425 aa8.6□□□□□ -1.03
SSBP3-212ENST00000528930 OR2A12Q8NGT7 310 aa8.6□□□□□ -1.03
SSBP3-212ENST00000528930 FNIP1Q8TF40 1166 aa8.6□□□□□ -1.03
SSBP3-212ENST00000528930 ARHGEF2Q92974 986 aaKnown RBP8.6□□□□□ -1.03
SSBP3-212ENST00000528930 TBC1D31Q96DN5 1066 aa8.6□□□□□ -1.03
SSBP3-212ENST00000528930 ORAI3Q9BRQ5 295 aa8.6□□□□□ -1.03
SSBP3-212ENST00000528930 C2orf49Q9BVC5 232 aaPredicted RBP8.6□□□□□ -1.03
SSBP3-212ENST00000528930 NEUROG2Q9H2A3 272 aa8.6□□□□□ -1.03
SSBP3-212ENST00000528930 NOL6Q9H6R4 1146 aaKnown RBP8.6□□□□□ -1.03
SSBP3-212ENST00000528930 FBXL12Q9NXK8 326 aa8.6□□□□□ -1.03
SSBP3-212ENST00000528930 ARHGAP20Q9P2F6 1191 aa8.6□□□□□ -1.03
SSBP3-212ENST00000528930 MKL2Q9ULH7 1088 aa8.6□□□□□ -1.03
SSBP3-212ENST00000528930 PPM1HQ9ULR3 514 aa8.6□□□□□ -1.03
SSBP3-212ENST00000528930 NENFQ9UMX5 172 aa8.6□□□□□ -1.03
SSBP3-212ENST00000528930 SATB2Q9UPW6 733 aa8.6□□□□□ -1.03
SSBP3-212ENST00000528930 PCDHGA8Q9Y5G5 932 aa8.6□□□□□ -1.03
SSBP3-212ENST00000528930 NIPBLQ6KC79 2804 aaeCLIP8.6□□□□□ -1.03
SSBP3-212ENST00000528930 A0A087X0T9 212 aa8.59□□□□□ -1.03
SSBP3-212ENST00000528930 CXorf51AA0A1B0GTR3 108 aa8.59□□□□□ -1.03
SSBP3-212ENST00000528930 WASH4PA8MWX3 477 aa8.59□□□□□ -1.03
SSBP3-212ENST00000528930 ALOX15BO15296 676 aa8.59□□□□□ -1.03
SSBP3-212ENST00000528930 MTSS1O43312 755 aa8.59□□□□□ -1.03
SSBP3-212ENST00000528930 NOBOXO60393 691 aa8.59□□□□□ -1.03
SSBP3-212ENST00000528930 RNASEH2AO75792 299 aaKnown RBP8.59□□□□□ -1.03
SSBP3-212ENST00000528930 IL1BP01584 269 aa8.59□□□□□ -1.03
SSBP3-212ENST00000528930 IGHV4-34P06331 123 aa8.59□□□□□ -1.03
SSBP3-212ENST00000528930 CTSLP07711 333 aa8.59□□□□□ -1.03
SSBP3-212ENST00000528930 FAM228BP0C875 321 aa8.59□□□□□ -1.03
SSBP3-212ENST00000528930 MYBL1P10243 752 aa8.59□□□□□ -1.03
SSBP3-212ENST00000528930 GOT1P17174 413 aa8.59□□□□□ -1.03
SSBP3-212ENST00000528930 PSMA2P25787 234 aa8.59□□□□□ -1.03
SSBP3-212ENST00000528930 EPHA8P29322 1005 aaPredicted RBP8.59□□□□□ -1.03
SSBP3-212ENST00000528930 RBMS1P29558 406 aaKnown RBP8.59□□□□□ -1.03
SSBP3-212ENST00000528930 DRD3P35462 400 aa8.59□□□□□ -1.03
SSBP3-212ENST00000528930 MAP2K3P46734 347 aa8.59□□□□□ -1.03
SSBP3-212ENST00000528930 PSMD8P48556 350 aa8.59□□□□□ -1.03
SSBP3-212ENST00000528930 GALCP54803 685 aa8.59□□□□□ -1.03
SSBP3-212ENST00000528930 SLC20A2Q08357 652 aa8.59□□□□□ -1.03
SSBP3-212ENST00000528930 SRSF6Q13247 344 aaKnown RBP8.59□□□□□ -1.03
SSBP3-212ENST00000528930 CA9Q16790 459 aa8.59□□□□□ -1.03
SSBP3-212ENST00000528930 TDRD12Q587J7 1177 aaKnown RBP8.59□□□□□ -1.03
SSBP3-212ENST00000528930 C3orf38Q5JPI3 329 aa8.59□□□□□ -1.03
SSBP3-212ENST00000528930 EFHC2Q5JST6 749 aa8.59□□□□□ -1.03
SSBP3-212ENST00000528930 RWDD4Q6NW29 188 aaKnown RBP8.59□□□□□ -1.03
SSBP3-212ENST00000528930 LINGO4Q6UY18 593 aa8.59□□□□□ -1.03
SSBP3-212ENST00000528930 ATP11CQ8NB49 1132 aa8.59□□□□□ -1.03
SSBP3-212ENST00000528930 RNF214Q8ND24 703 aa8.59□□□□□ -1.03
SSBP3-212ENST00000528930 HTR3CQ8WXA8 447 aa8.59□□□□□ -1.03
SSBP3-212ENST00000528930 OR8D1Q8WZ84 308 aa8.59□□□□□ -1.03
SSBP3-212ENST00000528930 VOPP1Q96AW1 172 aa8.59□□□□□ -1.03
SSBP3-212ENST00000528930 BIRC7Q96CA5 298 aa8.59□□□□□ -1.03
SSBP3-212ENST00000528930 ZNF653Q96CK0 615 aa8.59□□□□□ -1.03
SSBP3-212ENST00000528930 PEBP4Q96S96 227 aa8.59□□□□□ -1.03
SSBP3-212ENST00000528930 OMDQ99983 421 aa8.59□□□□□ -1.03
SSBP3-212ENST00000528930 SPON2Q9BUD6 331 aa8.59□□□□□ -1.03
SSBP3-212ENST00000528930 MAGEH1Q9H213 219 aa8.59□□□□□ -1.03
SSBP3-212ENST00000528930 EBF2Q9HAK2 575 aa8.59□□□□□ -1.03
SSBP3-212ENST00000528930 ATP13A1Q9HD20 1204 aa8.59□□□□□ -1.03
SSBP3-212ENST00000528930 GPATCH2LQ9NWQ4 482 aa8.59□□□□□ -1.03
SSBP3-212ENST00000528930 MYO1AQ9UBC5 1043 aa8.59□□□□□ -1.03
SSBP3-212ENST00000528930 DNAI1Q9UI46 699 aa8.59□□□□□ -1.03
SSBP3-212ENST00000528930 FZD4Q9ULV1 537 aa8.59□□□□□ -1.03
SSBP3-212ENST00000528930 NCKAP1Q9Y2A7 1128 aa8.59□□□□□ -1.03
SSBP3-212ENST00000528930 ZBTB32Q9Y2Y4 487 aaPredicted RBP8.59□□□□□ -1.03
SSBP3-212ENST00000528930 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP8.59□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms