RNA–Protein interactions for RNA: ENST00000528599.1

TRAF3IP2-211, Transcript of TRAF3 interacting protein 2, humanhuman

TSL 1 (best)

Gene TRAF3IP2, Length 1,663 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP2-211ENST00000528599 PPP1R16AQ96I34 528 aa12.22□□□□□ -0.45
TRAF3IP2-211ENST00000528599 IER2Q9BTL4 223 aa12.22□□□□□ -0.45
TRAF3IP2-211ENST00000528599 HDAC8Q9BY41 377 aa12.22□□□□□ -0.45
TRAF3IP2-211ENST00000528599 CD93Q9NPY3 652 aa12.22□□□□□ -0.45
TRAF3IP2-211ENST00000528599 EBF1Q9UH73 591 aa12.22□□□□□ -0.45
TRAF3IP2-211ENST00000528599 PHTF1Q9UMS5 762 aa12.22□□□□□ -0.45
TRAF3IP2-211ENST00000528599 PPIL1Q9Y3C6 166 aa12.22□□□□□ -0.45
TRAF3IP2-211ENST00000528599 SPO11Q9Y5K1 396 aa12.22□□□□□ -0.45
TRAF3IP2-211ENST00000528599 A0A0J9YYE9 177 aa12.21□□□□□ -0.45
TRAF3IP2-211ENST00000528599 A0A0U1RQS6 177 aa12.21□□□□□ -0.45
TRAF3IP2-211ENST00000528599 A0A1W2PP55 124 aa12.21□□□□□ -0.45
TRAF3IP2-211ENST00000528599 UPK3BL1B0FP48 263 aa12.21□□□□□ -0.45
TRAF3IP2-211ENST00000528599 UPK3BL2E5RIL1 263 aa12.21□□□□□ -0.45
TRAF3IP2-211ENST00000528599 SMAPO00193 183 aa12.21□□□□□ -0.45
TRAF3IP2-211ENST00000528599 NDC80O14777 642 aa12.21□□□□□ -0.45
TRAF3IP2-211ENST00000528599 SPINT1O43278 529 aa12.21□□□□□ -0.45
TRAF3IP2-211ENST00000528599 TRBC1P01850 177 aa12.21□□□□□ -0.45
TRAF3IP2-211ENST00000528599 DNTTP04053 509 aa12.21□□□□□ -0.45
TRAF3IP2-211ENST00000528599 MLNP12872 115 aa12.21□□□□□ -0.45
TRAF3IP2-211ENST00000528599 ADRB3P13945 408 aa12.21□□□□□ -0.45
TRAF3IP2-211ENST00000528599 HNF1BP35680 557 aa12.21□□□□□ -0.45
TRAF3IP2-211ENST00000528599 MAGEA3P43357 314 aa12.21□□□□□ -0.45
TRAF3IP2-211ENST00000528599 TNNT3P45378 269 aaPredicted RBP12.21□□□□□ -0.45
TRAF3IP2-211ENST00000528599 GRIA4P48058 902 aa12.21□□□□□ -0.45
TRAF3IP2-211ENST00000528599 CXCL12P48061 93 aa12.21□□□□□ -0.45
TRAF3IP2-211ENST00000528599 SESN2P58004 480 aaPredicted RBP12.21□□□□□ -0.45
TRAF3IP2-211ENST00000528599 POLR2LP62875 67 aaKnown RBP12.21□□□□□ -0.45
TRAF3IP2-211ENST00000528599 SARNPP82979 210 aaKnown RBP12.21□□□□□ -0.45
TRAF3IP2-211ENST00000528599 CAV1Q03135 178 aa12.21□□□□□ -0.45
TRAF3IP2-211ENST00000528599 ZBTB16Q05516 673 aa12.21□□□□□ -0.45
TRAF3IP2-211ENST00000528599 CDH17Q12864 832 aa12.21□□□□□ -0.45
TRAF3IP2-211ENST00000528599 CUL1Q13616 776 aa12.21□□□□□ -0.45
TRAF3IP2-211ENST00000528599 MSS51Q4VC12 460 aa12.21□□□□□ -0.45
TRAF3IP2-211ENST00000528599 BEND6Q5SZJ8 279 aaPredicted RBP12.21□□□□□ -0.45
TRAF3IP2-211ENST00000528599 CERCAMQ5T4B2 595 aa12.21□□□□□ -0.45
TRAF3IP2-211ENST00000528599 PIP5KL1Q5T9C9 394 aa12.21□□□□□ -0.45
TRAF3IP2-211ENST00000528599 AGGF1Q8N302 714 aaeCLIP12.21□□□□□ -0.45
TRAF3IP2-211ENST00000528599 HDDC3Q8N4P3 179 aa12.21□□□□□ -0.45
TRAF3IP2-211ENST00000528599 ZCCHC9Q8N567 271 aaKnown RBP12.21□□□□□ -0.45
TRAF3IP2-211ENST00000528599 DNAAF3Q8N9W5 541 aa12.21□□□□□ -0.45
TRAF3IP2-211ENST00000528599 MDGA1Q8NFP4 955 aa12.21□□□□□ -0.45
TRAF3IP2-211ENST00000528599 SCRN2Q96FV2 425 aa12.21□□□□□ -0.45
TRAF3IP2-211ENST00000528599 MCCC1Q96RQ3 725 aaPredicted RBP12.21□□□□□ -0.45
TRAF3IP2-211ENST00000528599 XAB2Q9HCS7 855 aaKnown RBP12.21□□□□□ -0.45
TRAF3IP2-211ENST00000528599 PCDH12Q9NPG4 1184 aa12.21□□□□□ -0.45
TRAF3IP2-211ENST00000528599 DYRK4Q9NR20 520 aa12.21□□□□□ -0.45
TRAF3IP2-211ENST00000528599 FBXL12Q9NXK8 326 aa12.21□□□□□ -0.45
TRAF3IP2-211ENST00000528599 NFU1Q9UMS0 254 aa12.21□□□□□ -0.45
TRAF3IP2-211ENST00000528599 NPIPB15A6NHN6 443 aaPredicted RBP12.2□□□□□ -0.46
TRAF3IP2-211ENST00000528599 A8MX80 341 aa12.2□□□□□ -0.46
TRAF3IP2-211ENST00000528599 K7ESF4 209 aa12.2□□□□□ -0.46
TRAF3IP2-211ENST00000528599 MAP2K7O14733 419 aa12.2□□□□□ -0.46
TRAF3IP2-211ENST00000528599 GALR2O43603 387 aaPredicted RBP12.2□□□□□ -0.46
TRAF3IP2-211ENST00000528599 BANF1O75531 89 aa12.2□□□□□ -0.46
TRAF3IP2-211ENST00000528599 RNASEH2AO75792 299 aaKnown RBP12.2□□□□□ -0.46
TRAF3IP2-211ENST00000528599 APBB3O95704 486 aa12.2□□□□□ -0.46
TRAF3IP2-211ENST00000528599 MYBL2P10244 700 aa12.2□□□□□ -0.46
TRAF3IP2-211ENST00000528599 PXNP49023 591 aaPredicted RBP12.2□□□□□ -0.46
TRAF3IP2-211ENST00000528599 NEK3P51956 506 aa12.2□□□□□ -0.46
TRAF3IP2-211ENST00000528599 TAS2R38P59533 333 aa12.2□□□□□ -0.46
TRAF3IP2-211ENST00000528599 VSNL1P62760 191 aa12.2□□□□□ -0.46
TRAF3IP2-211ENST00000528599 HLTFQ14527 1009 aaKnown RBP eCLIP12.2□□□□□ -0.46
TRAF3IP2-211ENST00000528599 AGBL4Q5VU57 503 aa12.2□□□□□ -0.46
TRAF3IP2-211ENST00000528599 DENND2CQ68D51 928 aa12.2□□□□□ -0.46
TRAF3IP2-211ENST00000528599 FBXL19Q6PCT2 694 aa12.2□□□□□ -0.46
TRAF3IP2-211ENST00000528599 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP12.2□□□□□ -0.46
TRAF3IP2-211ENST00000528599 RASSF3Q86WH2 238 aa12.2□□□□□ -0.46
TRAF3IP2-211ENST00000528599 C1orf210Q8IVY1 113 aa12.2□□□□□ -0.46
TRAF3IP2-211ENST00000528599 PGBD3Q8N328 593 aa12.2□□□□□ -0.46
TRAF3IP2-211ENST00000528599 GANCQ8TET4 914 aa12.2□□□□□ -0.46
TRAF3IP2-211ENST00000528599 FAM131CQ96AQ9 280 aa12.2□□□□□ -0.46
TRAF3IP2-211ENST00000528599 OMDQ99983 421 aa12.2□□□□□ -0.46
TRAF3IP2-211ENST00000528599 SPATA6Q9NWH7 488 aaPredicted RBP12.2□□□□□ -0.46
TRAF3IP2-211ENST00000528599 BCCIPQ9P287 314 aaKnown RBP eCLIP12.2□□□□□ -0.46
TRAF3IP2-211ENST00000528599 B4GALT6Q9UBX8 382 aa12.2□□□□□ -0.46
TRAF3IP2-211ENST00000528599 GGT7Q9UJ14 662 aa12.2□□□□□ -0.46
TRAF3IP2-211ENST00000528599 SCML1Q9UN30 329 aa12.2□□□□□ -0.46
TRAF3IP2-211ENST00000528599 ITM2BQ9Y287 266 aa12.2□□□□□ -0.46
TRAF3IP2-211ENST00000528599 DNAH14Q0VDD8 3507 aa12.2□□□□□ -0.46
TRAF3IP2-211ENST00000528599 CAPN8A6NHC0 703 aa12.19□□□□□ -0.46
TRAF3IP2-211ENST00000528599 H0Y858 1186 aa12.19□□□□□ -0.46
TRAF3IP2-211ENST00000528599 AURKAO14965 403 aa12.19□□□□□ -0.46
TRAF3IP2-211ENST00000528599 AREL1O15033 823 aa12.19□□□□□ -0.46
TRAF3IP2-211ENST00000528599 ALDH1A2O94788 518 aa12.19□□□□□ -0.46
TRAF3IP2-211ENST00000528599 PAPSS2O95340 614 aaPredicted RBP12.19□□□□□ -0.46
TRAF3IP2-211ENST00000528599 ACADMP11310 421 aa12.19□□□□□ -0.46
TRAF3IP2-211ENST00000528599 XPAP23025 273 aaPredicted RBP12.19□□□□□ -0.46
TRAF3IP2-211ENST00000528599 MGAT1P26572 445 aa12.19□□□□□ -0.46
TRAF3IP2-211ENST00000528599 NPY2RP49146 381 aa12.19□□□□□ -0.46
TRAF3IP2-211ENST00000528599 TPMTP51580 245 aa12.19□□□□□ -0.46
TRAF3IP2-211ENST00000528599 CCR3P51677 355 aa12.19□□□□□ -0.46
TRAF3IP2-211ENST00000528599 ARL4CP56559 192 aa12.19□□□□□ -0.46
TRAF3IP2-211ENST00000528599 FAM193AP78312 1265 aa12.19□□□□□ -0.46
TRAF3IP2-211ENST00000528599 CRADDP78560 199 aa12.19□□□□□ -0.46
TRAF3IP2-211ENST00000528599 POU6F1Q14863 301 aa12.19□□□□□ -0.46
TRAF3IP2-211ENST00000528599 HIF1AQ16665 826 aa12.19□□□□□ -0.46
TRAF3IP2-211ENST00000528599 CDKN3Q16667 212 aa12.19□□□□□ -0.46
TRAF3IP2-211ENST00000528599 TSSK4Q6SA08 328 aa12.19□□□□□ -0.46
TRAF3IP2-211ENST00000528599 CCNI2Q6ZMN8 369 aaPredicted RBP12.19□□□□□ -0.46
TRAF3IP2-211ENST00000528599 TSPAN33Q86UF1 283 aa12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms