RNA–Protein interactions for RNA: ENST00000528441.1

CMTM1-210, Transcript of CKLF like MARVEL transmembrane domain containing 1, humanhuman

TSL 1 (best)

Gene CMTM1, Length 979 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM1-210ENST00000528441 MACROD2A1Z1Q3 448 aa9.13□□□□□ -0.95
CMTM1-210ENST00000528441 CPED1A4D0V7 1026 aa9.13□□□□□ -0.95
CMTM1-210ENST00000528441 TMEM8BA6NDV4 472 aa9.13□□□□□ -0.95
CMTM1-210ENST00000528441 PPP1R12AO14974 1030 aaPredicted RBP9.13□□□□□ -0.95
CMTM1-210ENST00000528441 AREL1O15033 823 aa9.13□□□□□ -0.95
CMTM1-210ENST00000528441 AQP9O43315 295 aa9.13□□□□□ -0.95
CMTM1-210ENST00000528441 RASGRP1O95267 797 aa9.13□□□□□ -0.95
CMTM1-210ENST00000528441 SLC4A1P02730 911 aa9.13□□□□□ -0.95
CMTM1-210ENST00000528441 CTPS1P17812 591 aa9.13□□□□□ -0.95
CMTM1-210ENST00000528441 KELP23276 732 aa9.13□□□□□ -0.95
CMTM1-210ENST00000528441 HNRNPH3P31942 346 aaKnown RBP9.13□□□□□ -0.95
CMTM1-210ENST00000528441 MAN1A1P33908 653 aa9.13□□□□□ -0.95
CMTM1-210ENST00000528441 ARHGAP25P42331 645 aa9.13□□□□□ -0.95
CMTM1-210ENST00000528441 CSNK1DP48730 415 aa9.13□□□□□ -0.95
CMTM1-210ENST00000528441 RPIAP49247 311 aa9.13□□□□□ -0.95
CMTM1-210ENST00000528441 TAS2R40P59535 323 aa9.13□□□□□ -0.95
CMTM1-210ENST00000528441 NSUN2Q08J23 767 aaKnown RBP eCLIP9.13□□□□□ -0.95
CMTM1-210ENST00000528441 SHBQ15464 509 aa9.13□□□□□ -0.95
CMTM1-210ENST00000528441 IFI16Q16666 785 aaKnown RBP9.13□□□□□ -0.95
CMTM1-210ENST00000528441 DEFB133Q30KQ1 61 aa9.13□□□□□ -0.95
CMTM1-210ENST00000528441 TMEM52BQ4KMG9 183 aa9.13□□□□□ -0.95
CMTM1-210ENST00000528441 PRRT3Q5FWE3 981 aa9.13□□□□□ -0.95
CMTM1-210ENST00000528441 HES3Q5TGS1 186 aa9.13□□□□□ -0.95
CMTM1-210ENST00000528441 NCBP2-AS2Q69YL0 99 aa9.13□□□□□ -0.95
CMTM1-210ENST00000528441 RAET1GQ6H3X3 334 aa9.13□□□□□ -0.95
CMTM1-210ENST00000528441 ESRP1Q6NXG1 681 aaKnown RBP9.13□□□□□ -0.95
CMTM1-210ENST00000528441 KDM7AQ6ZMT4 941 aa9.13□□□□□ -0.95
CMTM1-210ENST00000528441 MACC1Q6ZN28 852 aa9.13□□□□□ -0.95
CMTM1-210ENST00000528441 CPNE8Q86YQ8 564 aa9.13□□□□□ -0.95
CMTM1-210ENST00000528441 RHOT1Q8IXI2 618 aa9.13□□□□□ -0.95
CMTM1-210ENST00000528441 CCDC13Q8IYE1 715 aa9.13□□□□□ -0.95
CMTM1-210ENST00000528441 PHACTR4Q8IZ21 702 aa9.13□□□□□ -0.95
CMTM1-210ENST00000528441 RBFAQ8N0V3 343 aa9.13□□□□□ -0.95
CMTM1-210ENST00000528441 SLC22A18ASQ8N1D0 253 aa9.13□□□□□ -0.95
CMTM1-210ENST00000528441 ZNF548Q8NEK5 533 aaPredicted RBP9.13□□□□□ -0.95
CMTM1-210ENST00000528441 BAHD1Q8TBE0 780 aaPredicted RBP9.13□□□□□ -0.95
CMTM1-210ENST00000528441 HCAR2Q8TDS4 363 aa9.13□□□□□ -0.95
CMTM1-210ENST00000528441 NUS1Q96E22 293 aa9.13□□□□□ -0.95
CMTM1-210ENST00000528441 BMFQ96LC9 184 aa9.13□□□□□ -0.95
CMTM1-210ENST00000528441 LENG8Q96PV6 779 aaPredicted RBP9.13□□□□□ -0.95
CMTM1-210ENST00000528441 PSKH2Q96QS6 385 aa9.13□□□□□ -0.95
CMTM1-210ENST00000528441 NUDCD1Q96RS6 583 aa9.13□□□□□ -0.95
CMTM1-210ENST00000528441 SEMA3CQ99985 751 aa9.13□□□□□ -0.95
CMTM1-210ENST00000528441 C1QTNF2Q9BXJ5 285 aa9.13□□□□□ -0.95
CMTM1-210ENST00000528441 UCKL1Q9NWZ5 548 aa9.13□□□□□ -0.95
CMTM1-210ENST00000528441 SIRPGQ9P1W8 387 aa9.13□□□□□ -0.95
CMTM1-210ENST00000528441 GULP1Q9UBP9 304 aa9.13□□□□□ -0.95
CMTM1-210ENST00000528441 ZMIZ1Q9ULJ6 1067 aa9.13□□□□□ -0.95
CMTM1-210ENST00000528441 HYOU1Q9Y4L1 999 aa9.13□□□□□ -0.95
CMTM1-210ENST00000528441 OR1A2Q9Y585 309 aa9.13□□□□□ -0.95
CMTM1-210ENST00000528441 SPTY2D1-AS1A0A0U1RR47 76 aa9.12□□□□□ -0.95
CMTM1-210ENST00000528441 TOR1BO14657 336 aa9.12□□□□□ -0.95
CMTM1-210ENST00000528441 MUSKO15146 869 aa9.12□□□□□ -0.95
CMTM1-210ENST00000528441 BUB1BO60566 1050 aaPredicted RBP9.12□□□□□ -0.95
CMTM1-210ENST00000528441 MAFKO60675 156 aa9.12□□□□□ -0.95
CMTM1-210ENST00000528441 SOCS5O75159 536 aa9.12□□□□□ -0.95
CMTM1-210ENST00000528441 RECQL5O94762 991 aaPredicted RBP9.12□□□□□ -0.95
CMTM1-210ENST00000528441 TNFP01375 233 aa9.12□□□□□ -0.95
CMTM1-210ENST00000528441 CSF2P04141 144 aa9.12□□□□□ -0.95
CMTM1-210ENST00000528441 CDK4P11802 303 aa9.12□□□□□ -0.95
CMTM1-210ENST00000528441 MYF5P13349 255 aa9.12□□□□□ -0.95
CMTM1-210ENST00000528441 NME1P15531 152 aaKnown RBP9.12□□□□□ -0.95
CMTM1-210ENST00000528441 ZFXP17010 805 aaPredicted RBP9.12□□□□□ -0.95
CMTM1-210ENST00000528441 KDELR1P24390 212 aa9.12□□□□□ -0.95
CMTM1-210ENST00000528441 CTNNA2P26232 953 aa9.12□□□□□ -0.95
CMTM1-210ENST00000528441 VIPR1P32241 457 aa9.12□□□□□ -0.95
CMTM1-210ENST00000528441 MMP12P39900 470 aa9.12□□□□□ -0.95
CMTM1-210ENST00000528441 GARSP41250 739 aaKnown RBP9.12□□□□□ -0.95
CMTM1-210ENST00000528441 SLC1A1P43005 524 aa9.12□□□□□ -0.95
CMTM1-210ENST00000528441 CLDN6P56747 220 aa9.12□□□□□ -0.95
CMTM1-210ENST00000528441 YPEL5P62699 121 aa9.12□□□□□ -0.95
CMTM1-210ENST00000528441 ZNF211Q13398 564 aaPredicted RBP9.12□□□□□ -0.95
CMTM1-210ENST00000528441 FZD2Q14332 565 aa9.12□□□□□ -0.95
CMTM1-210ENST00000528441 INPP5AQ14642 412 aa9.12□□□□□ -0.95
CMTM1-210ENST00000528441 NFATC4Q14934 902 aa9.12□□□□□ -0.95
CMTM1-210ENST00000528441 LLGL1Q15334 1064 aa9.12□□□□□ -0.95
CMTM1-210ENST00000528441 CDKN3Q16667 212 aa9.12□□□□□ -0.95
CMTM1-210ENST00000528441 AFMIDQ63HM1 303 aa9.12□□□□□ -0.95
CMTM1-210ENST00000528441 CRTC1Q6UUV9 634 aa9.12□□□□□ -0.95
CMTM1-210ENST00000528441 DBX2Q6ZNG2 339 aa9.12□□□□□ -0.95
CMTM1-210ENST00000528441 DPPA4Q7L190 304 aa9.12□□□□□ -0.95
CMTM1-210ENST00000528441 KIAA1328Q86T90 577 aa9.12□□□□□ -0.95
CMTM1-210ENST00000528441 MARCH9Q86YJ5 346 aa9.12□□□□□ -0.95
CMTM1-210ENST00000528441 LRRC49Q8IUZ0 686 aa9.12□□□□□ -0.95
CMTM1-210ENST00000528441 TP53I13Q8NBR0 393 aaPredicted RBP9.12□□□□□ -0.95
CMTM1-210ENST00000528441 LPCAT1Q8NF37 534 aa9.12□□□□□ -0.95
CMTM1-210ENST00000528441 OR4C6Q8NH72 309 aa9.12□□□□□ -0.95
CMTM1-210ENST00000528441 PCDH19Q8TAB3 1148 aa9.12□□□□□ -0.95
CMTM1-210ENST00000528441 MAPK15Q8TD08 544 aa9.12□□□□□ -0.95
CMTM1-210ENST00000528441 LRRN4Q8WUT4 740 aa9.12□□□□□ -0.95
CMTM1-210ENST00000528441 ASB12Q8WXK4 309 aa9.12□□□□□ -0.95
CMTM1-210ENST00000528441 KCTD12Q96CX2 325 aaKnown RBP9.12□□□□□ -0.95
CMTM1-210ENST00000528441 IFT43Q96FT9 208 aa9.12□□□□□ -0.95
CMTM1-210ENST00000528441 WDR92Q96MX6 357 aa9.12□□□□□ -0.95
CMTM1-210ENST00000528441 MGME1Q9BQP7 344 aa9.12□□□□□ -0.95
CMTM1-210ENST00000528441 APOOQ9BUR5 198 aa9.12□□□□□ -0.95
CMTM1-210ENST00000528441 WDR26Q9H7D7 661 aa9.12□□□□□ -0.95
CMTM1-210ENST00000528441 NOD2Q9HC29 1040 aa9.12□□□□□ -0.95
CMTM1-210ENST00000528441 MBNL1Q9NR56 388 aaKnown RBP9.12□□□□□ -0.95
CMTM1-210ENST00000528441 DDX56Q9NY93 547 aaKnown RBP9.12□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms