RNA–Protein interactions for RNA: ENST00000527720.5

USH1C-207, Transcript of USH1 protein network component harmonin, humanhuman

TSL 1 (best) BASIC

Gene USH1C, Length 2,278 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH1C-207ENST00000527720 LHX8Q68G74 356 aa15.41■□□□□ 0.06
USH1C-207ENST00000527720 NXNQ6DKJ4 435 aa15.41■□□□□ 0.06
USH1C-207ENST00000527720 MRNIPQ6NTE8 343 aa15.41■□□□□ 0.06
USH1C-207ENST00000527720 RSPO2Q6UXX9 243 aaPredicted RBP15.41■□□□□ 0.06
USH1C-207ENST00000527720 DHDDSQ86SQ9 333 aa15.41■□□□□ 0.06
USH1C-207ENST00000527720 HPS6Q86YV9 775 aa15.41■□□□□ 0.06
USH1C-207ENST00000527720 SGF29Q96ES7 293 aa15.41■□□□□ 0.06
USH1C-207ENST00000527720 B3GALT6Q96L58 329 aa15.41■□□□□ 0.06
USH1C-207ENST00000527720 PPP1R12CQ9BZL4 782 aa15.41■□□□□ 0.06
USH1C-207ENST00000527720 LRFN2Q9ULH4 789 aa15.41■□□□□ 0.06
USH1C-207ENST00000527720 NBNO60934 754 aa15.41■□□□□ 0.06
USH1C-207ENST00000527720 SERPINF2P08697 491 aa15.41■□□□□ 0.06
USH1C-207ENST00000527720 HSPA1AP0DMV8 641 aaKnown RBP15.41■□□□□ 0.06
USH1C-207ENST00000527720 HSPA1BP0DMV9 641 aaKnown RBP15.41■□□□□ 0.06
USH1C-207ENST00000527720 OGNP20774 298 aaKnown RBP15.41■□□□□ 0.06
USH1C-207ENST00000527720 SP100P23497 879 aaPredicted RBP15.41■□□□□ 0.06
USH1C-207ENST00000527720 NFKB2Q00653 900 aa15.41■□□□□ 0.06
USH1C-207ENST00000527720 SULT2A1Q06520 285 aa15.41■□□□□ 0.06
USH1C-207ENST00000527720 PEX6Q13608 980 aa15.41■□□□□ 0.06
USH1C-207ENST00000527720 RFTN1Q14699 578 aaPredicted RBP15.41■□□□□ 0.06
USH1C-207ENST00000527720 RTP2Q5QGT7 225 aa15.41■□□□□ 0.06
USH1C-207ENST00000527720 CIR1Q86X95 450 aaPredicted RBP15.41■□□□□ 0.06
USH1C-207ENST00000527720 PDZD8Q8NEN9 1154 aa15.41■□□□□ 0.06
USH1C-207ENST00000527720 DBF4BQ8NFT6 615 aa15.41■□□□□ 0.06
USH1C-207ENST00000527720 SHKBP1Q8TBC3 707 aa15.41■□□□□ 0.06
USH1C-207ENST00000527720 RAET1EQ8TD07 263 aa15.41■□□□□ 0.06
USH1C-207ENST00000527720 SLC26A7Q8TE54 656 aa15.41■□□□□ 0.06
USH1C-207ENST00000527720 OVCA2Q8WZ82 227 aa15.41■□□□□ 0.06
USH1C-207ENST00000527720 PPP1R36Q96LQ0 422 aa15.41■□□□□ 0.06
USH1C-207ENST00000527720 CATSPER2Q96P56 530 aa15.41■□□□□ 0.06
USH1C-207ENST00000527720 TTPALQ9BTX7 342 aa15.41■□□□□ 0.06
USH1C-207ENST00000527720 GTSE1Q9NYZ3 720 aa15.41■□□□□ 0.06
USH1C-207ENST00000527720 BCAP29Q9UHQ4 241 aa15.41■□□□□ 0.06
USH1C-207ENST00000527720 DNMT3LQ9UJW3 386 aa15.41■□□□□ 0.06
USH1C-207ENST00000527720 AIM2O14862 343 aa15.4■□□□□ 0.06
USH1C-207ENST00000527720 BUD23O43709 281 aaKnown RBP15.4■□□□□ 0.06
USH1C-207ENST00000527720 ACSL4O60488 711 aa15.4■□□□□ 0.06
USH1C-207ENST00000527720 RPP40O75818 363 aaKnown RBP15.4■□□□□ 0.06
USH1C-207ENST00000527720 JUNP05412 331 aaKnown RBP15.4■□□□□ 0.06
USH1C-207ENST00000527720 IMPDH1P20839 514 aa15.4■□□□□ 0.06
USH1C-207ENST00000527720 FDXRP22570 491 aa15.4■□□□□ 0.06
USH1C-207ENST00000527720 DUSP4Q13115 394 aa15.4■□□□□ 0.06
USH1C-207ENST00000527720 CHSY3Q70JA7 882 aa15.4■□□□□ 0.06
USH1C-207ENST00000527720 NPAS4Q8IUM7 802 aa15.4■□□□□ 0.06
USH1C-207ENST00000527720 KBTBD2Q8IY47 623 aa15.4■□□□□ 0.06
USH1C-207ENST00000527720 DSELQ8IZU8 1212 aa15.4■□□□□ 0.06
USH1C-207ENST00000527720 LGI2Q8N0V4 545 aa15.4■□□□□ 0.06
USH1C-207ENST00000527720 PGAM4Q8N0Y7 254 aa15.4■□□□□ 0.06
USH1C-207ENST00000527720 PELI3Q8N2H9 469 aa15.4■□□□□ 0.06
USH1C-207ENST00000527720 MICAL1Q8TDZ2 1067 aa15.4■□□□□ 0.06
USH1C-207ENST00000527720 L3HYPDHQ96EM0 354 aa15.4■□□□□ 0.06
USH1C-207ENST00000527720 MGME1Q9BQP7 344 aa15.4■□□□□ 0.06
USH1C-207ENST00000527720 UNKQ9C0B0 810 aaKnown RBP15.4■□□□□ 0.06
USH1C-207ENST00000527720 EFCAB1Q9HAE3 211 aa15.4■□□□□ 0.06
USH1C-207ENST00000527720 MEAF6Q9HAF1 191 aa15.4■□□□□ 0.06
USH1C-207ENST00000527720 PHF24Q9UPV7 400 aa15.4■□□□□ 0.06
USH1C-207ENST00000527720 CEP350Q5VT06 3117 aa15.4■□□□□ 0.06
USH1C-207ENST00000527720 TTC24A2A3L6 582 aaPredicted RBP15.4■□□□□ 0.06
USH1C-207ENST00000527720 NEMP2A6NFY4 417 aa15.4■□□□□ 0.06
USH1C-207ENST00000527720 CD3EAPO15446 510 aaKnown RBP15.4■□□□□ 0.06
USH1C-207ENST00000527720 GALTP07902 379 aa15.4■□□□□ 0.06
USH1C-207ENST00000527720 ATP5C1P36542 298 aaKnown RBP15.4■□□□□ 0.06
USH1C-207ENST00000527720 INHBCP55103 352 aa15.4■□□□□ 0.06
USH1C-207ENST00000527720 CDH4P55283 916 aa15.4■□□□□ 0.06
USH1C-207ENST00000527720 XIAPP98170 497 aa15.4■□□□□ 0.06
USH1C-207ENST00000527720 KLHDC10Q6PID8 442 aa15.4■□□□□ 0.06
USH1C-207ENST00000527720 BNC2Q6ZN30 1099 aaPredicted RBP15.4■□□□□ 0.06
USH1C-207ENST00000527720 KBTBD6Q86V97 674 aa15.4■□□□□ 0.06
USH1C-207ENST00000527720 RNF135Q8IUD6 432 aa15.4■□□□□ 0.06
USH1C-207ENST00000527720 ANKRD49Q8WVL7 239 aa15.4■□□□□ 0.06
USH1C-207ENST00000527720 PYDC1Q8WXC3 89 aa15.4■□□□□ 0.06
USH1C-207ENST00000527720 SEPT8Q92599 483 aa15.4■□□□□ 0.06
USH1C-207ENST00000527720 CCDC124Q96CT7 223 aaKnown RBP15.4■□□□□ 0.06
USH1C-207ENST00000527720 TBATAQ96M53 351 aa15.4■□□□□ 0.06
USH1C-207ENST00000527720 NR1H4Q96RI1 486 aaPredicted RBP15.4■□□□□ 0.06
USH1C-207ENST00000527720 ECSITQ9BQ95 431 aa15.4■□□□□ 0.06
USH1C-207ENST00000527720 CFHR5Q9BXR6 569 aa15.4■□□□□ 0.06
USH1C-207ENST00000527720 MARCH4Q9P2E8 410 aaPredicted RBP15.4■□□□□ 0.06
USH1C-207ENST00000527720 SEPT3Q9UH03 358 aa15.4■□□□□ 0.06
USH1C-207ENST00000527720 COPG1Q9Y678 874 aaKnown RBP15.4■□□□□ 0.06
USH1C-207ENST00000527720 TET1Q8NFU7 2136 aa15.39■□□□□ 0.05
USH1C-207ENST00000527720 MUSKO15146 869 aa15.39■□□□□ 0.05
USH1C-207ENST00000527720 NDST3O95803 873 aa15.39■□□□□ 0.05
USH1C-207ENST00000527720 PDHA1P08559 390 aa15.39■□□□□ 0.05
USH1C-207ENST00000527720 KCNA5P22460 613 aa15.39■□□□□ 0.05
USH1C-207ENST00000527720 CDC25CP30307 473 aa15.39■□□□□ 0.05
USH1C-207ENST00000527720 SLC11A2P49281 568 aa15.39■□□□□ 0.05
USH1C-207ENST00000527720 SUOXP51687 545 aa15.39■□□□□ 0.05
USH1C-207ENST00000527720 CDKN2DP55273 166 aa15.39■□□□□ 0.05
USH1C-207ENST00000527720 GNA12Q03113 381 aa15.39■□□□□ 0.05
USH1C-207ENST00000527720 TCHHL1Q5QJ38 904 aaPredicted RBP15.39■□□□□ 0.05
USH1C-207ENST00000527720 PPM1LQ5SGD2 360 aa15.39■□□□□ 0.05
USH1C-207ENST00000527720 IZUMO2Q6UXV1 221 aa15.39■□□□□ 0.05
USH1C-207ENST00000527720 CUZD1Q86UP6 607 aa15.39■□□□□ 0.05
USH1C-207ENST00000527720 MYEOVQ96EZ4 313 aa15.39■□□□□ 0.05
USH1C-207ENST00000527720 VCXQ9H320 206 aa15.39■□□□□ 0.05
USH1C-207ENST00000527720 GOT2P00505 430 aaKnown RBP15.38■□□□□ 0.05
USH1C-207ENST00000527720 GNRH1P01148 92 aa15.38■□□□□ 0.05
USH1C-207ENST00000527720 HNRNPLP14866 589 aaKnown RBP eCLIP15.38■□□□□ 0.05
USH1C-207ENST00000527720 ATF6P18850 670 aa15.38■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 69.3 ms