RNA–Protein interactions for RNA: ENST00000527265.1

CLNS1A-208, Transcript of chloride nucleotide-sensitive channel 1A, humanhuman

TSL 2

Gene CLNS1A, Length 620 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLNS1A-208ENST00000527265 SGCGQ13326 291 aa3.92□□□□□ -1.78
CLNS1A-208ENST00000527265 MTA1Q13330 715 aa3.92□□□□□ -1.78
CLNS1A-208ENST00000527265 TRA2AQ13595 282 aaKnown RBP eCLIP3.92□□□□□ -1.784e-8■□□□□ 9.8
CLNS1A-208ENST00000527265 ALKBH1Q13686 389 aaKnown RBP3.92□□□□□ -1.78
CLNS1A-208ENST00000527265 RRS1Q15050 365 aaKnown RBP3.92□□□□□ -1.78
CLNS1A-208ENST00000527265 PDK1Q15118 436 aa3.92□□□□□ -1.78
CLNS1A-208ENST00000527265 ELAVL1Q15717 326 aaKnown RBP3.92□□□□□ -1.78
CLNS1A-208ENST00000527265 FAM187BQ17R55 369 aa3.92□□□□□ -1.78
CLNS1A-208ENST00000527265 LY6KQ17RY6 165 aa3.92□□□□□ -1.78
CLNS1A-208ENST00000527265 PROSER3Q2NL68 480 aa3.92□□□□□ -1.78
CLNS1A-208ENST00000527265 ZSCAN23Q3MJ62 389 aa3.92□□□□□ -1.78
CLNS1A-208ENST00000527265 C12orf60Q5U649 245 aa3.92□□□□□ -1.78
CLNS1A-208ENST00000527265 ATG9BQ674R7 924 aa3.92□□□□□ -1.78
CLNS1A-208ENST00000527265 SLC9A4Q6AI14 798 aa3.92□□□□□ -1.78
CLNS1A-208ENST00000527265 ETFRF1Q6IPR1 90 aa3.92□□□□□ -1.78
CLNS1A-208ENST00000527265 TMEM110Q86TL2 294 aa3.92□□□□□ -1.78
CLNS1A-208ENST00000527265 ADCK1Q86TW2 530 aa3.92□□□□□ -1.78
CLNS1A-208ENST00000527265 FAM83AQ86UY5 434 aa3.92□□□□□ -1.78
CLNS1A-208ENST00000527265 SGMS1Q86VZ5 419 aa3.92□□□□□ -1.78
CLNS1A-208ENST00000527265 VPS52Q8N1B4 723 aa3.92□□□□□ -1.78
CLNS1A-208ENST00000527265 SIRT6Q8N6T7 355 aa3.92□□□□□ -1.78
CLNS1A-208ENST00000527265 DDX51Q8N8A6 666 aaKnown RBP eCLIP3.92□□□□□ -1.78
CLNS1A-208ENST00000527265 C11orf65Q8NCR3 313 aa3.92□□□□□ -1.78
CLNS1A-208ENST00000527265 ZFP28Q8NHY6 868 aa3.92□□□□□ -1.78
CLNS1A-208ENST00000527265 HASPINQ8TF76 798 aa3.92□□□□□ -1.78
CLNS1A-208ENST00000527265 PTPMT1Q8WUK0 201 aaPredicted RBP3.92□□□□□ -1.78
CLNS1A-208ENST00000527265 OSCP1Q8WVF1 389 aa3.92□□□□□ -1.78
CLNS1A-208ENST00000527265 ST8SIA2Q92186 375 aa3.92□□□□□ -1.78
CLNS1A-208ENST00000527265 PRCCQ92733 491 aaPredicted RBP3.92□□□□□ -1.78
CLNS1A-208ENST00000527265 VPS50Q96JG6 964 aa3.92□□□□□ -1.78
CLNS1A-208ENST00000527265 CNDP1Q96KN2 507 aa3.92□□□□□ -1.78
CLNS1A-208ENST00000527265 FAM111AQ96PZ2 611 aa3.92□□□□□ -1.78
CLNS1A-208ENST00000527265 OR2A14Q96R47 310 aa3.92□□□□□ -1.78
CLNS1A-208ENST00000527265 UTP14AQ9BVJ6 771 aaKnown RBP3.92□□□□□ -1.78
CLNS1A-208ENST00000527265 TRIM31Q9BZY9 425 aa3.92□□□□□ -1.78
CLNS1A-208ENST00000527265 XRN2Q9H0D6 950 aaKnown RBP eCLIP3.92□□□□□ -1.78
CLNS1A-208ENST00000527265 NT5C3AQ9H0P0 336 aa3.92□□□□□ -1.78
CLNS1A-208ENST00000527265 USP29Q9HBJ7 922 aa3.92□□□□□ -1.78
CLNS1A-208ENST00000527265 PAPOLBQ9NRJ5 636 aaKnown RBP3.92□□□□□ -1.78
CLNS1A-208ENST00000527265 SLC6A13Q9NSD5 602 aa3.92□□□□□ -1.78
CLNS1A-208ENST00000527265 IARS2Q9NSE4 1012 aaKnown RBP3.92□□□□□ -1.78
CLNS1A-208ENST00000527265 PSD3Q9NYI0 1048 aa3.92□□□□□ -1.78
CLNS1A-208ENST00000527265 GDE1Q9NZC3 331 aa3.92□□□□□ -1.78
CLNS1A-208ENST00000527265 SEPT10Q9P0V9 454 aa3.92□□□□□ -1.78
CLNS1A-208ENST00000527265 KIAA1456Q9P272 454 aa3.92□□□□□ -1.78
CLNS1A-208ENST00000527265 CTTNBP2NLQ9P2B4 639 aa3.92□□□□□ -1.78
CLNS1A-208ENST00000527265 CRNNQ9UBG3 495 aaPredicted RBP3.92□□□□□ -1.78
CLNS1A-208ENST00000527265 HAO1Q9UJM8 370 aa3.92□□□□□ -1.78
CLNS1A-208ENST00000527265 CDH7Q9ULB5 785 aa3.92□□□□□ -1.78
CLNS1A-208ENST00000527265 PLAGL1Q9UM63 463 aa3.92□□□□□ -1.78
CLNS1A-208ENST00000527265 A4GNTQ9UNA3 340 aa3.92□□□□□ -1.78
CLNS1A-208ENST00000527265 CHKBQ9Y259 395 aa3.92□□□□□ -1.78
CLNS1A-208ENST00000527265 SSX2IPQ9Y2D8 614 aa3.92□□□□□ -1.78
CLNS1A-208ENST00000527265 CLDN16Q9Y5I7 305 aa3.92□□□□□ -1.78
CLNS1A-208ENST00000527265 BAZ1AQ9NRL2 1556 aaPredicted RBP3.92□□□□□ -1.78
CLNS1A-208ENST00000527265 ATP8B3O60423 1300 aa3.92□□□□□ -1.78
CLNS1A-208ENST00000527265 CLSPNQ9HAW4 1339 aa3.92□□□□□ -1.78
CLNS1A-208ENST00000527265 GPR75-ASB3A0A0A6YYF3 556 aa3.91□□□□□ -1.78
CLNS1A-208ENST00000527265 A0A1W2PR77 199 aa3.91□□□□□ -1.78
CLNS1A-208ENST00000527265 SYCE3A1L190 88 aa3.91□□□□□ -1.78
CLNS1A-208ENST00000527265 HTR3EA5X5Y0 456 aa3.91□□□□□ -1.78
CLNS1A-208ENST00000527265 ZAR1LA6NP61 321 aa3.91□□□□□ -1.78
CLNS1A-208ENST00000527265 PRR5-ARHGAP8B1AHC4 643 aa3.91□□□□□ -1.78
CLNS1A-208ENST00000527265 SLC33A1O00400 549 aaPredicted RBP3.91□□□□□ -1.78
CLNS1A-208ENST00000527265 RIPK2O43353 540 aa3.91□□□□□ -1.78
CLNS1A-208ENST00000527265 HBP1O60381 514 aa3.91□□□□□ -1.78
CLNS1A-208ENST00000527265 NDUFS3O75489 264 aa3.91□□□□□ -1.78
CLNS1A-208ENST00000527265 IPO13O94829 963 aaKnown RBP3.91□□□□□ -1.78
CLNS1A-208ENST00000527265 SUN1O94901 812 aa3.91□□□□□ -1.78
CLNS1A-208ENST00000527265 ALPPP05187 535 aa3.91□□□□□ -1.78
CLNS1A-208ENST00000527265 ALPPL2P10696 532 aa3.91□□□□□ -1.78
CLNS1A-208ENST00000527265 PDGFRAP16234 1089 aa3.91□□□□□ -1.78
CLNS1A-208ENST00000527265 MMP8P22894 467 aa3.91□□□□□ -1.78
CLNS1A-208ENST00000527265 POU1F1P28069 291 aa3.91□□□□□ -1.78
CLNS1A-208ENST00000527265 CTGFP29279 349 aa3.91□□□□□ -1.78
CLNS1A-208ENST00000527265 GJC1P36383 396 aa3.91□□□□□ -1.78
CLNS1A-208ENST00000527265 SKIV2L2P42285 1042 aaKnown RBP3.91□□□□□ -1.78
CLNS1A-208ENST00000527265 ATXN3P54252 364 aaPredicted RBP3.91□□□□□ -1.78
CLNS1A-208ENST00000527265 GALCP54803 685 aa3.91□□□□□ -1.78
CLNS1A-208ENST00000527265 NME5P56597 212 aa3.91□□□□□ -1.78
CLNS1A-208ENST00000527265 KRTAP10-7P60409 375 aaPredicted RBP3.91□□□□□ -1.78
CLNS1A-208ENST00000527265 STX1BP61266 288 aa3.91□□□□□ -1.78
CLNS1A-208ENST00000527265 ASIC1P78348 528 aa3.91□□□□□ -1.78
CLNS1A-208ENST00000527265 KCNJ10P78508 379 aa3.91□□□□□ -1.78
CLNS1A-208ENST00000527265 B4GALNT1Q00973 533 aa3.91□□□□□ -1.78
CLNS1A-208ENST00000527265 ZBTB16Q05516 673 aa3.91□□□□□ -1.78
CLNS1A-208ENST00000527265 TEFQ10587 303 aa3.91□□□□□ -1.78
CLNS1A-208ENST00000527265 FOXL1Q12952 345 aa3.91□□□□□ -1.78
CLNS1A-208ENST00000527265 FBXO43Q4G163 708 aa3.91□□□□□ -1.78
CLNS1A-208ENST00000527265 CEP55Q53EZ4 464 aa3.91□□□□□ -1.78
CLNS1A-208ENST00000527265 HSP90AA5PQ58FG0 334 aa3.91□□□□□ -1.78
CLNS1A-208ENST00000527265 ACSM6Q6P461 480 aa3.91□□□□□ -1.78
CLNS1A-208ENST00000527265 RGS9BPQ6ZS82 235 aa3.91□□□□□ -1.78
CLNS1A-208ENST00000527265 TMPRSS9Q7Z410 1059 aa3.91□□□□□ -1.78
CLNS1A-208ENST00000527265 FAM160B2Q86V87 743 aa3.91□□□□□ -1.78
CLNS1A-208ENST00000527265 TMEM200AQ86VY9 491 aa3.91□□□□□ -1.78
CLNS1A-208ENST00000527265 PRIMA1Q86XR5 153 aa3.91□□□□□ -1.78
CLNS1A-208ENST00000527265 CEP57Q86XR8 500 aa3.91□□□□□ -1.78
CLNS1A-208ENST00000527265 P3H2Q8IVL5 708 aa3.91□□□□□ -1.78
CLNS1A-208ENST00000527265 IZUMO1Q8IYV9 350 aa3.91□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms