RNA–Protein interactions for RNA: ENST00000526430.1

NEDD8-204, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 3

Gene NEDD8, Length 286 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-204ENST00000526430 ACTL7AQ9Y615 435 aa11.07□□□□□ -0.64
NEDD8-204ENST00000526430 CCDC187A0A096LP49 1063 aa11.06□□□□□ -0.64
NEDD8-204ENST00000526430 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP11.06□□□□□ -0.64
NEDD8-204ENST00000526430 ILVBLA1L0T0 632 aa11.06□□□□□ -0.64
NEDD8-204ENST00000526430 PMS2P1A4D2B8 440 aa11.06□□□□□ -0.64
NEDD8-204ENST00000526430 ZNF487B1APH4 448 aa11.06□□□□□ -0.64
NEDD8-204ENST00000526430 EEF2KO00418 725 aaKnown RBP11.06□□□□□ -0.64
NEDD8-204ENST00000526430 FFAR2O15552 330 aa11.06□□□□□ -0.64
NEDD8-204ENST00000526430 PSTPIP1O43586 416 aa11.06□□□□□ -0.64
NEDD8-204ENST00000526430 PIAS2O75928 621 aa11.06□□□□□ -0.64
NEDD8-204ENST00000526430 KRT7P08729 469 aa11.06□□□□□ -0.64
NEDD8-204ENST00000526430 PYGMP11217 842 aa11.06□□□□□ -0.64
NEDD8-204ENST00000526430 HTR7P34969 479 aa11.06□□□□□ -0.64
NEDD8-204ENST00000526430 CDKN2BP42772 138 aa11.06□□□□□ -0.64
NEDD8-204ENST00000526430 NUMBP49757 651 aa11.06□□□□□ -0.64
NEDD8-204ENST00000526430 TPI1P60174 286 aa11.06□□□□□ -0.64
NEDD8-204ENST00000526430 PPP2CBP62714 309 aa11.06□□□□□ -0.64
NEDD8-204ENST00000526430 PPP2CAP67775 309 aa11.06□□□□□ -0.64
NEDD8-204ENST00000526430 ZNF177Q13360 481 aaPredicted RBP11.06□□□□□ -0.64
NEDD8-204ENST00000526430 PDK2Q15119 407 aa11.06□□□□□ -0.64
NEDD8-204ENST00000526430 SKIDA1Q1XH10 827 aa11.06□□□□□ -0.64
NEDD8-204ENST00000526430 ANKRD20A8PQ5CZ79 823 aa11.06□□□□□ -0.64
NEDD8-204ENST00000526430 PITRM1Q5JRX3 1037 aa11.06□□□□□ -0.64
NEDD8-204ENST00000526430 RNF219Q5W0B1 726 aaPredicted RBP11.06□□□□□ -0.64
NEDD8-204ENST00000526430 MBLAC2Q68D91 279 aa11.06□□□□□ -0.64
NEDD8-204ENST00000526430 HIST2H2BCQ6DN03 193 aa11.06□□□□□ -0.64
NEDD8-204ENST00000526430 RWDD4Q6NW29 188 aaKnown RBP11.06□□□□□ -0.64
NEDD8-204ENST00000526430 LRRC31Q6UY01 552 aa11.06□□□□□ -0.64
NEDD8-204ENST00000526430 SETD3Q86TU7 594 aaPredicted RBP11.06□□□□□ -0.64
NEDD8-204ENST00000526430 PRPF39Q86UA1 669 aaKnown RBP11.06□□□□□ -0.64
NEDD8-204ENST00000526430 MFN1Q8IWA4 741 aa11.06□□□□□ -0.64
NEDD8-204ENST00000526430 PLD5Q8N7P1 536 aa11.06□□□□□ -0.64
NEDD8-204ENST00000526430 KDM1BQ8NB78 822 aa11.06□□□□□ -0.64
NEDD8-204ENST00000526430 ARHGEF2Q92974 986 aaKnown RBP11.06□□□□□ -0.64
NEDD8-204ENST00000526430 FAM131CQ96AQ9 280 aa11.06□□□□□ -0.64
NEDD8-204ENST00000526430 RNF157Q96PX1 679 aa11.06□□□□□ -0.64
NEDD8-204ENST00000526430 EPAS1Q99814 870 aa11.06□□□□□ -0.64
NEDD8-204ENST00000526430 TLR10Q9BXR5 811 aa11.06□□□□□ -0.64
NEDD8-204ENST00000526430 TSGA10Q9BZW7 698 aa11.06□□□□□ -0.64
NEDD8-204ENST00000526430 SLC39A8Q9C0K1 460 aa11.06□□□□□ -0.64
NEDD8-204ENST00000526430 NCKIPSDQ9NZQ3 722 aa11.06□□□□□ -0.64
NEDD8-204ENST00000526430 RCOR3Q9P2K3 495 aaPredicted RBP11.06□□□□□ -0.64
NEDD8-204ENST00000526430 DNAI1Q9UI46 699 aa11.06□□□□□ -0.64
NEDD8-204ENST00000526430 TUBD1Q9UJT1 453 aa11.06□□□□□ -0.64
NEDD8-204ENST00000526430 HIVEP3Q5T1R4 2406 aa11.06□□□□□ -0.64
NEDD8-204ENST00000526430 SDK2Q58EX2 2172 aa11.06□□□□□ -0.64
NEDD8-204ENST00000526430 NEMP2A6NFY4 417 aa11.05□□□□□ -0.64
NEDD8-204ENST00000526430 SCAMP1O15126 338 aa11.05□□□□□ -0.64
NEDD8-204ENST00000526430 SPOPO43791 374 aa11.05□□□□□ -0.64
NEDD8-204ENST00000526430 SNAP91O60641 907 aa11.05□□□□□ -0.64
NEDD8-204ENST00000526430 SIN3BO75182 1162 aa11.05□□□□□ -0.64
NEDD8-204ENST00000526430 ZNF821O75541 412 aaPredicted RBP11.05□□□□□ -0.64
NEDD8-204ENST00000526430 PEX11BO96011 259 aa11.05□□□□□ -0.64
NEDD8-204ENST00000526430 ADH1BP00325 375 aa11.05□□□□□ -0.64
NEDD8-204ENST00000526430 MT-CO1P00395 513 aa11.05□□□□□ -0.64
NEDD8-204ENST00000526430 LIPCP11150 499 aa11.05□□□□□ -0.64
NEDD8-204ENST00000526430 TNNT1P13805 278 aa11.05□□□□□ -0.64
NEDD8-204ENST00000526430 OR1E1P30953 314 aa11.05□□□□□ -0.64
NEDD8-204ENST00000526430 SLC5A2P31639 672 aa11.05□□□□□ -0.64
NEDD8-204ENST00000526430 SLC8A1P32418 973 aa11.05□□□□□ -0.64
NEDD8-204ENST00000526430 GJC1P36383 396 aa11.05□□□□□ -0.64
NEDD8-204ENST00000526430 SSR1P43307 286 aaKnown RBP11.05□□□□□ -0.64
NEDD8-204ENST00000526430 MAPKAPK2P49137 400 aa11.05□□□□□ -0.64
NEDD8-204ENST00000526430 ZNF135P52742 658 aaPredicted RBP11.05□□□□□ -0.64
NEDD8-204ENST00000526430 NAP1L1P55209 391 aaKnown RBP11.05□□□□□ -0.64
NEDD8-204ENST00000526430 GNA12Q03113 381 aa11.05□□□□□ -0.64
NEDD8-204ENST00000526430 STAT4Q14765 748 aa11.05□□□□□ -0.64
NEDD8-204ENST00000526430 CLCA4Q14CN2 919 aa11.05□□□□□ -0.64
NEDD8-204ENST00000526430 LLGL1Q15334 1064 aa11.05□□□□□ -0.64
NEDD8-204ENST00000526430 NCBP2-AS2Q69YL0 99 aa11.05□□□□□ -0.64
NEDD8-204ENST00000526430 SLC9A4Q6AI14 798 aa11.05□□□□□ -0.64
NEDD8-204ENST00000526430 SPOCD1Q6ZMY3 1216 aa11.05□□□□□ -0.64
NEDD8-204ENST00000526430 OTOGQ6ZRI0 2925 aa11.05□□□□□ -0.64
NEDD8-204ENST00000526430 ARHGAP36Q6ZRI8 547 aa11.05□□□□□ -0.64
NEDD8-204ENST00000526430 TRIM69Q86WT6 500 aa11.05□□□□□ -0.64
NEDD8-204ENST00000526430 VSIG1Q86XK7 387 aa11.05□□□□□ -0.64
NEDD8-204ENST00000526430 RCOR2Q8IZ40 523 aa11.05□□□□□ -0.64
NEDD8-204ENST00000526430 TXLNBQ8N3L3 684 aa11.05□□□□□ -0.64
NEDD8-204ENST00000526430 AADATQ8N5Z0 425 aa11.05□□□□□ -0.64
NEDD8-204ENST00000526430 ZSCAN1Q8NBB4 408 aa11.05□□□□□ -0.64
NEDD8-204ENST00000526430 KCTD6Q8NC69 237 aa11.05□□□□□ -0.64
NEDD8-204ENST00000526430 OR14C36Q8NHC7 312 aa11.05□□□□□ -0.64
NEDD8-204ENST00000526430 WDR48Q8TAF3 677 aa11.05□□□□□ -0.64
NEDD8-204ENST00000526430 IFT43Q96FT9 208 aa11.05□□□□□ -0.64
NEDD8-204ENST00000526430 ZNF670Q9BS34 389 aa11.05□□□□□ -0.64
NEDD8-204ENST00000526430 SLCO3A1Q9UIG8 710 aa11.05□□□□□ -0.64
NEDD8-204ENST00000526430 AMFRQ9UKV5 643 aa11.05□□□□□ -0.64
NEDD8-204ENST00000526430 F8P00451 2351 aa11.05□□□□□ -0.64
NEDD8-204ENST00000526430 ESPL1Q14674 2120 aa11.05□□□□□ -0.64
NEDD8-204ENST00000526430 TBC1D3DA0A087WVF3 549 aa11.04□□□□□ -0.64
NEDD8-204ENST00000526430 TBC1D3IA0A087WXS9 549 aa11.04□□□□□ -0.64
NEDD8-204ENST00000526430 TBC1D3EA0A087X179 549 aa11.04□□□□□ -0.64
NEDD8-204ENST00000526430 TBC1D3KA0A087X1G2 549 aa11.04□□□□□ -0.64
NEDD8-204ENST00000526430 TARSL2A2RTX5 802 aaKnown RBP11.04□□□□□ -0.64
NEDD8-204ENST00000526430 LRRD1A4D1F6 860 aa11.04□□□□□ -0.64
NEDD8-204ENST00000526430 TBC1D3FA6NER0 549 aaPredicted RBP11.04□□□□□ -0.64
NEDD8-204ENST00000526430 TBC1D3LB9A6J9 549 aa11.04□□□□□ -0.64
NEDD8-204ENST00000526430 RASA4BC9J798 803 aa11.04□□□□□ -0.64
NEDD8-204ENST00000526430 PRAMEF26H0Y7S4 382 aa11.04□□□□□ -0.64
NEDD8-204ENST00000526430 H3BRJ5 948 aa11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms