RNA–Protein interactions for RNA: ENST00000525284.5

LRRK1-202, Transcript of leucine rich repeat kinase 1, humanhuman

TSL 1 (best)

Gene LRRK1, Length 6,494 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK1-202ENST00000525284 SPG21Q9NZD8 308 aa13.72□□□□□ -0.21
LRRK1-202ENST00000525284 CORO1CQ9ULV4 474 aaPredicted RBP13.72□□□□□ -0.21
LRRK1-202ENST00000525284 KCNIP3Q9Y2W7 256 aa13.72□□□□□ -0.21
LRRK1-202ENST00000525284 FAM86B1E9PN63 330 aa13.72□□□□□ -0.21
LRRK1-202ENST00000525284 MED24O75448 989 aa13.72□□□□□ -0.21
LRRK1-202ENST00000525284 IGSF6O95976 241 aa13.72□□□□□ -0.21
LRRK1-202ENST00000525284 RPS2P15880 293 aaKnown RBP13.72□□□□□ -0.21
LRRK1-202ENST00000525284 IGFALSP35858 605 aa13.72□□□□□ -0.21
LRRK1-202ENST00000525284 ABCA11PQ4W5N1 156 aa13.72□□□□□ -0.21
LRRK1-202ENST00000525284 RTL4Q6ZR62 310 aa13.72□□□□□ -0.21
LRRK1-202ENST00000525284 PRR23BQ6ZRT6 265 aa13.72□□□□□ -0.21
LRRK1-202ENST00000525284 PEX5LQ8IYB4 626 aa13.72□□□□□ -0.21
LRRK1-202ENST00000525284 SNX33Q8WV41 574 aa13.72□□□□□ -0.21
LRRK1-202ENST00000525284 TEFMQ96QE5 360 aaKnown RBP13.72□□□□□ -0.21
LRRK1-202ENST00000525284 SNTG1Q9NSN8 517 aa13.72□□□□□ -0.21
LRRK1-202ENST00000525284 NCKAP1Q9Y2A7 1128 aa13.72□□□□□ -0.21
LRRK1-202ENST00000525284 KCNK1O00180 336 aa13.72□□□□□ -0.21
LRRK1-202ENST00000525284 XKRYO14609 159 aa13.72□□□□□ -0.21
LRRK1-202ENST00000525284 CSN2P05814 226 aa13.72□□□□□ -0.21
LRRK1-202ENST00000525284 SLC6A2P23975 617 aa13.72□□□□□ -0.21
LRRK1-202ENST00000525284 SNAPC1Q16533 368 aa13.72□□□□□ -0.21
LRRK1-202ENST00000525284 QSOX2Q6ZRP7 698 aa13.72□□□□□ -0.21
LRRK1-202ENST00000525284 CLIP4Q8N3C7 705 aa13.72□□□□□ -0.21
LRRK1-202ENST00000525284 ATP6V1C2Q8NEY4 427 aa13.72□□□□□ -0.21
LRRK1-202ENST00000525284 TESCQ96BS2 214 aa13.72□□□□□ -0.21
LRRK1-202ENST00000525284 TMEM176AQ96HP8 235 aa13.72□□□□□ -0.21
LRRK1-202ENST00000525284 C12orf66Q96MD2 445 aa13.72□□□□□ -0.21
LRRK1-202ENST00000525284 ZDHHC6Q9H6R6 413 aa13.72□□□□□ -0.21
LRRK1-202ENST00000525284 LINC00032P0C843 101 aa13.72□□□□□ -0.21
LRRK1-202ENST00000525284 PSKH1P11801 424 aa13.72□□□□□ -0.21
LRRK1-202ENST00000525284 LTKP29376 864 aa13.72□□□□□ -0.21
LRRK1-202ENST00000525284 TBX4P57082 545 aa13.72□□□□□ -0.21
LRRK1-202ENST00000525284 PTENP60484 403 aa13.72□□□□□ -0.21
LRRK1-202ENST00000525284 AAGABQ6PD74 315 aa13.72□□□□□ -0.21
LRRK1-202ENST00000525284 CLEC10AQ8IUN9 316 aa13.72□□□□□ -0.21
LRRK1-202ENST00000525284 INO80EQ8NBZ0 244 aaPredicted RBP13.72□□□□□ -0.21
LRRK1-202ENST00000525284 OR2L2Q8NH16 312 aa13.72□□□□□ -0.21
LRRK1-202ENST00000525284 MND1Q9BWT6 205 aa13.72□□□□□ -0.21
LRRK1-202ENST00000525284 MAGEE1Q9HCI5 957 aa13.72□□□□□ -0.21
LRRK1-202ENST00000525284 AASSQ9UDR5 926 aa13.72□□□□□ -0.21
LRRK1-202ENST00000525284 IQGAP3Q86VI3 1631 aa13.71□□□□□ -0.21
LRRK1-202ENST00000525284 ORC5O43913 435 aa13.71□□□□□ -0.21
LRRK1-202ENST00000525284 LTA4HP09960 611 aaKnown RBP13.71□□□□□ -0.21
LRRK1-202ENST00000525284 TPTEP56180 551 aa13.71□□□□□ -0.21
LRRK1-202ENST00000525284 GFOD2Q3B7J2 385 aa13.71□□□□□ -0.21
LRRK1-202ENST00000525284 HECTD3Q5T447 861 aa13.71□□□□□ -0.21
LRRK1-202ENST00000525284 TEX19Q8NA77 164 aa13.71□□□□□ -0.21
LRRK1-202ENST00000525284 ALDH8A1Q9H2A2 487 aaPredicted RBP13.71□□□□□ -0.21
LRRK1-202ENST00000525284 ANKZF1Q9H8Y5 726 aa13.71□□□□□ -0.21
LRRK1-202ENST00000525284 RPTORQ8N122 1335 aa13.71□□□□□ -0.21
LRRK1-202ENST00000525284 UGT2B11O75310 529 aa13.71□□□□□ -0.21
LRRK1-202ENST00000525284 SAGP10523 405 aaPredicted RBP13.71□□□□□ -0.21
LRRK1-202ENST00000525284 HLFQ16534 295 aa13.71□□□□□ -0.21
LRRK1-202ENST00000525284 XKR6Q5GH73 641 aa13.71□□□□□ -0.21
LRRK1-202ENST00000525284 AMIGO1Q86WK6 493 aa13.71□□□□□ -0.21
LRRK1-202ENST00000525284 RIT2Q99578 217 aa13.71□□□□□ -0.21
LRRK1-202ENST00000525284 LPIN3Q9BQK8 851 aa13.71□□□□□ -0.21
LRRK1-202ENST00000525284 SAMD4AQ9UPU9 718 aaKnown RBP13.71□□□□□ -0.21
LRRK1-202ENST00000525284 CLASP1Q7Z460 1538 aa13.71□□□□□ -0.21
LRRK1-202ENST00000525284 CCDC163A0A0D9SF12 145 aa13.71□□□□□ -0.21
LRRK1-202ENST00000525284 CPT1AP50416 773 aa13.71□□□□□ -0.21
LRRK1-202ENST00000525284 MECP2P51608 486 aaKnown RBP13.71□□□□□ -0.21
LRRK1-202ENST00000525284 ZNF543Q08ER8 600 aa13.71□□□□□ -0.21
LRRK1-202ENST00000525284 NAB1Q13506 487 aa13.71□□□□□ -0.21
LRRK1-202ENST00000525284 PAPD7Q5XG87 772 aaKnown RBP13.71□□□□□ -0.21
LRRK1-202ENST00000525284 LPCAT4Q643R3 524 aa13.71□□□□□ -0.21
LRRK1-202ENST00000525284 PHC3Q8NDX5 983 aa13.71□□□□□ -0.21
LRRK1-202ENST00000525284 ADAM32Q8TC27 787 aa13.71□□□□□ -0.21
LRRK1-202ENST00000525284 CERKQ8TCT0 537 aa13.71□□□□□ -0.21
LRRK1-202ENST00000525284 RERGQ96A58 199 aaPredicted RBP13.71□□□□□ -0.21
LRRK1-202ENST00000525284 RCN3Q96D15 328 aa13.71□□□□□ -0.21
LRRK1-202ENST00000525284 MGME1Q9BQP7 344 aa13.71□□□□□ -0.21
LRRK1-202ENST00000525284 TTLL2Q9BWV7 592 aa13.71□□□□□ -0.21
LRRK1-202ENST00000525284 GIN1Q9NXP7 522 aa13.71□□□□□ -0.21
LRRK1-202ENST00000525284 CASTOR2A6NHX0 329 aa13.71□□□□□ -0.21
LRRK1-202ENST00000525284 PRLRP16471 622 aa13.71□□□□□ -0.21
LRRK1-202ENST00000525284 NAGLUP54802 743 aa13.71□□□□□ -0.21
LRRK1-202ENST00000525284 ABRQ12979 859 aa13.71□□□□□ -0.21
LRRK1-202ENST00000525284 ZNF730Q6ZMV8 503 aa13.71□□□□□ -0.21
LRRK1-202ENST00000525284 SGMS1Q86VZ5 419 aa13.71□□□□□ -0.21
LRRK1-202ENST00000525284 PLCZ1Q86YW0 608 aa13.71□□□□□ -0.21
LRRK1-202ENST00000525284 STAG3L4Q8TBR4 150 aa13.71□□□□□ -0.21
LRRK1-202ENST00000525284 NOL11Q9H8H0 719 aaKnown RBP13.71□□□□□ -0.21
LRRK1-202ENST00000525284 GPRC5CQ9NQ84 441 aa13.71□□□□□ -0.21
LRRK1-202ENST00000525284 SAGE2PA6NJ88 616 aa13.71□□□□□ -0.22
LRRK1-202ENST00000525284 RFXANKO14593 260 aa13.71□□□□□ -0.22
LRRK1-202ENST00000525284 CATP04040 527 aaKnown RBP13.71□□□□□ -0.22
LRRK1-202ENST00000525284 HGFP14210 728 aa13.71□□□□□ -0.22
LRRK1-202ENST00000525284 MPPE1Q53F39 396 aa13.71□□□□□ -0.22
LRRK1-202ENST00000525284 TTI2Q6NXR4 508 aa13.71□□□□□ -0.22
LRRK1-202ENST00000525284 BEND5Q7L4P6 421 aa13.71□□□□□ -0.22
LRRK1-202ENST00000525284 RGL4Q8IZJ4 473 aa13.71□□□□□ -0.22
LRRK1-202ENST00000525284 CD300LFQ8TDQ1 290 aa13.71□□□□□ -0.22
LRRK1-202ENST00000525284 UBE2E3Q969T4 207 aa13.71□□□□□ -0.22
LRRK1-202ENST00000525284 GPSM3Q9Y4H4 160 aa13.71□□□□□ -0.22
LRRK1-202ENST00000525284 TIMM13Q9Y5L4 95 aaPredicted RBP13.71□□□□□ -0.22
LRRK1-202ENST00000525284 CXCR2P25025 360 aa13.71□□□□□ -0.22
LRRK1-202ENST00000525284 PSMA1P25786 263 aaKnown RBP13.71□□□□□ -0.22
LRRK1-202ENST00000525284 RPA1P27694 616 aa13.71□□□□□ -0.22
LRRK1-202ENST00000525284 GRIA4P48058 902 aa13.71□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 132.2 ms