RNA–Protein interactions for RNA: ENST00000524955.1

CHMP4A-202, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 2

Gene CHMP4A, Length 268 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-202ENST00000524955 HORMAD1Q86X24 394 aa4.62□□□□□ -1.67
CHMP4A-202ENST00000524955 CREG2Q8IUH2 290 aa4.62□□□□□ -1.67
CHMP4A-202ENST00000524955 PDCD7Q8N8D1 485 aaKnown RBP4.62□□□□□ -1.67
CHMP4A-202ENST00000524955 PNPLA1Q8N8W4 532 aa4.62□□□□□ -1.67
CHMP4A-202ENST00000524955 CCDC89Q8N998 374 aa4.62□□□□□ -1.67
CHMP4A-202ENST00000524955 C12orf50Q8NA57 414 aaPredicted RBP4.62□□□□□ -1.67
CHMP4A-202ENST00000524955 BLOC1S5Q8TDH9 187 aa4.62□□□□□ -1.67
CHMP4A-202ENST00000524955 CXorf40AQ8TE69 158 aa4.62□□□□□ -1.67
CHMP4A-202ENST00000524955 NAT14Q8WUY8 206 aa4.62□□□□□ -1.67
CHMP4A-202ENST00000524955 PIH1D2Q8WWB5 315 aa4.62□□□□□ -1.67
CHMP4A-202ENST00000524955 ECHDC3Q96DC8 303 aa4.62□□□□□ -1.67
CHMP4A-202ENST00000524955 IFT43Q96FT9 208 aa4.62□□□□□ -1.67
CHMP4A-202ENST00000524955 ZC3H10Q96K80 434 aaKnown RBP4.62□□□□□ -1.67
CHMP4A-202ENST00000524955 MRGPRX2Q96LB1 330 aa4.62□□□□□ -1.67
CHMP4A-202ENST00000524955 ZNF641Q96N77 438 aaPredicted RBP4.62□□□□□ -1.67
CHMP4A-202ENST00000524955 FCRL5Q96RD9 977 aa4.62□□□□□ -1.67
CHMP4A-202ENST00000524955 TUBGCP5Q96RT8 1024 aa4.62□□□□□ -1.67
CHMP4A-202ENST00000524955 TRIB3Q96RU7 358 aa4.62□□□□□ -1.67
CHMP4A-202ENST00000524955 AGAP2Q99490 1192 aa4.62□□□□□ -1.67
CHMP4A-202ENST00000524955 ORAI3Q9BRQ5 295 aa4.62□□□□□ -1.67
CHMP4A-202ENST00000524955 TRIM51Q9BSJ1 452 aa4.62□□□□□ -1.67
CHMP4A-202ENST00000524955 GTPBP2Q9BX10 602 aaKnown RBP4.62□□□□□ -1.67
CHMP4A-202ENST00000524955 OSBPL1AQ9BXW6 950 aa4.62□□□□□ -1.67
CHMP4A-202ENST00000524955 HDAC8Q9BY41 377 aa4.62□□□□□ -1.67
CHMP4A-202ENST00000524955 SLC17A9Q9BYT1 436 aa4.62□□□□□ -1.67
CHMP4A-202ENST00000524955 TRIM31Q9BZY9 425 aa4.62□□□□□ -1.67
CHMP4A-202ENST00000524955 SLC25A51Q9H1U9 297 aa4.62□□□□□ -1.67
CHMP4A-202ENST00000524955 GBA3Q9H227 469 aa4.62□□□□□ -1.67
CHMP4A-202ENST00000524955 IL21RQ9HBE5 538 aa4.62□□□□□ -1.67
CHMP4A-202ENST00000524955 ETNK1Q9HBU6 452 aa4.62□□□□□ -1.67
CHMP4A-202ENST00000524955 TM9SF3Q9HD45 589 aa4.62□□□□□ -1.67
CHMP4A-202ENST00000524955 ARFGAP3Q9NP61 516 aa4.62□□□□□ -1.67
CHMP4A-202ENST00000524955 RAB6BQ9NRW1 208 aa4.62□□□□□ -1.67
CHMP4A-202ENST00000524955 KCND1Q9NSA2 647 aa4.62□□□□□ -1.67
CHMP4A-202ENST00000524955 GOLGA6AQ9NYA3 693 aa4.62□□□□□ -1.67
CHMP4A-202ENST00000524955 DKK3Q9UBP4 350 aa4.62□□□□□ -1.67
CHMP4A-202ENST00000524955 FAM153AQ9UHL3 310 aa4.62□□□□□ -1.67
CHMP4A-202ENST00000524955 GMEB2Q9UKD1 530 aa4.62□□□□□ -1.67
CHMP4A-202ENST00000524955 TRHDEQ9UKU6 1024 aa4.62□□□□□ -1.67
CHMP4A-202ENST00000524955 PHTF1Q9UMS5 762 aa4.62□□□□□ -1.67
CHMP4A-202ENST00000524955 SCML1Q9UN30 329 aa4.62□□□□□ -1.67
CHMP4A-202ENST00000524955 OR1A2Q9Y585 309 aa4.62□□□□□ -1.67
CHMP4A-202ENST00000524955 SNX11Q9Y5W9 270 aa4.62□□□□□ -1.67
CHMP4A-202ENST00000524955 SAR1BQ9Y6B6 198 aa4.62□□□□□ -1.67
CHMP4A-202ENST00000524955 F5P12259 2224 aa4.61□□□□□ -1.67
CHMP4A-202ENST00000524955 C1orf232A0A0U1RR37 186 aa4.61□□□□□ -1.67
CHMP4A-202ENST00000524955 CXorf51AA0A1B0GTR3 108 aa4.61□□□□□ -1.67
CHMP4A-202ENST00000524955 A0A1W2PPC4 97 aa4.61□□□□□ -1.67
CHMP4A-202ENST00000524955 TSPAN11A1L157 253 aa4.61□□□□□ -1.67
CHMP4A-202ENST00000524955 CAPN8A6NHC0 703 aa4.61□□□□□ -1.67
CHMP4A-202ENST00000524955 ANKRD66B4E2M5 251 aa4.61□□□□□ -1.67
CHMP4A-202ENST00000524955 E7EVH7 732 aa4.61□□□□□ -1.67
CHMP4A-202ENST00000524955 INPP4BO15327 924 aa4.61□□□□□ -1.67
CHMP4A-202ENST00000524955 BCAT2O15382 392 aaPredicted RBP4.61□□□□□ -1.67
CHMP4A-202ENST00000524955 TTI1O43156 1089 aa4.61□□□□□ -1.67
CHMP4A-202ENST00000524955 SLC7A4O43246 635 aa4.61□□□□□ -1.67
CHMP4A-202ENST00000524955 MTSS1O43312 755 aa4.61□□□□□ -1.67
CHMP4A-202ENST00000524955 TSPAN6O43657 245 aa4.61□□□□□ -1.67
CHMP4A-202ENST00000524955 SDC3O75056 442 aa4.61□□□□□ -1.67
CHMP4A-202ENST00000524955 PHF2O75151 1096 aa4.61□□□□□ -1.67
CHMP4A-202ENST00000524955 SOCS5O75159 536 aa4.61□□□□□ -1.67
CHMP4A-202ENST00000524955 BANF1O75531 89 aa4.61□□□□□ -1.67
CHMP4A-202ENST00000524955 GCATO75600 419 aa4.61□□□□□ -1.67
CHMP4A-202ENST00000524955 TM7SF2O76062 418 aa4.61□□□□□ -1.67
CHMP4A-202ENST00000524955 HEXIM1O94992 359 aaKnown RBP4.61□□□□□ -1.67
CHMP4A-202ENST00000524955 EPN2O95208 641 aa4.61□□□□□ -1.67
CHMP4A-202ENST00000524955 NDST3O95803 873 aa4.61□□□□□ -1.67
CHMP4A-202ENST00000524955 KRT14P02533 472 aa4.61□□□□□ -1.67
CHMP4A-202ENST00000524955 ITGAVP06756 1048 aa4.61□□□□□ -1.67
CHMP4A-202ENST00000524955 APRTP07741 180 aa4.61□□□□□ -1.67
CHMP4A-202ENST00000524955 RETP07949 1114 aa4.61□□□□□ -1.67
CHMP4A-202ENST00000524955 F7P08709 466 aaPredicted RBP4.61□□□□□ -1.67
CHMP4A-202ENST00000524955 ATXN1LP0C7T5 689 aaKnown RBP4.61□□□□□ -1.67
CHMP4A-202ENST00000524955 ELFN1P0C7U0 828 aa4.61□□□□□ -1.67
CHMP4A-202ENST00000524955 CD27P26842 260 aa4.61□□□□□ -1.67
CHMP4A-202ENST00000524955 CA5AP35218 305 aa4.61□□□□□ -1.67
CHMP4A-202ENST00000524955 IGFALSP35858 605 aa4.61□□□□□ -1.67
CHMP4A-202ENST00000524955 LMAN1P49257 510 aa4.61□□□□□ -1.67
CHMP4A-202ENST00000524955 GEMP55040 296 aa4.61□□□□□ -1.67
CHMP4A-202ENST00000524955 RPS21P63220 83 aaKnown RBP4.61□□□□□ -1.67
CHMP4A-202ENST00000524955 CRADDP78560 199 aa4.61□□□□□ -1.67
CHMP4A-202ENST00000524955 PTSQ03393 145 aa4.61□□□□□ -1.67
CHMP4A-202ENST00000524955 SFSWAPQ12872 951 aaKnown RBP4.61□□□□□ -1.67
CHMP4A-202ENST00000524955 GPS1Q13098 491 aa4.61□□□□□ -1.67
CHMP4A-202ENST00000524955 SEPT6Q14141 434 aa4.61□□□□□ -1.67
CHMP4A-202ENST00000524955 PRPSAP1Q14558 356 aa4.61□□□□□ -1.67
CHMP4A-202ENST00000524955 INPP5AQ14642 412 aa4.61□□□□□ -1.67
CHMP4A-202ENST00000524955 GRM3Q14832 879 aa4.61□□□□□ -1.67
CHMP4A-202ENST00000524955 IRF4Q15306 451 aa4.61□□□□□ -1.67
CHMP4A-202ENST00000524955 SLC1A5Q15758 541 aa4.61□□□□□ -1.67
CHMP4A-202ENST00000524955 PARP6Q2NL67 630 aa4.61□□□□□ -1.67
CHMP4A-202ENST00000524955 WSCD2Q2TBF2 565 aa4.61□□□□□ -1.67
CHMP4A-202ENST00000524955 UAP1L1Q3KQV9 507 aa4.61□□□□□ -1.67
CHMP4A-202ENST00000524955 TMEM52BQ4KMG9 183 aa4.61□□□□□ -1.67
CHMP4A-202ENST00000524955 TMEM259Q4ZIN3 620 aa4.61□□□□□ -1.67
CHMP4A-202ENST00000524955 CCDC38Q502W7 563 aa4.61□□□□□ -1.67
CHMP4A-202ENST00000524955 WDR45BQ5MNZ6 344 aa4.61□□□□□ -1.67
CHMP4A-202ENST00000524955 CERCAMQ5T4B2 595 aa4.61□□□□□ -1.67
CHMP4A-202ENST00000524955 ANKRD22Q5VYY1 191 aa4.61□□□□□ -1.67
CHMP4A-202ENST00000524955 ALG1LQ6GMV1 187 aa4.61□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms