RNA–Protein interactions for RNA: ENST00000524922.1

CD44-212, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 352 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-212ENST00000524922 TCEA1P23193 301 aaKnown RBP1.82□□□□□ -2.12
CD44-212ENST00000524922 EEF1GP26641 437 aaKnown RBP1.82□□□□□ -2.12
CD44-212ENST00000524922 MAPK4P31152 587 aa1.82□□□□□ -2.12
CD44-212ENST00000524922 SLC16A2P36021 539 aa1.82□□□□□ -2.12
CD44-212ENST00000524922 NBL1P41271 181 aa1.82□□□□□ -2.12
CD44-212ENST00000524922 LMOD3Q0VAK6 560 aa1.82□□□□□ -2.12
CD44-212ENST00000524922 PPIGQ13427 754 aaKnown RBP eCLIP1.82□□□□□ -2.12
CD44-212ENST00000524922 GALNT3Q14435 633 aa1.82□□□□□ -2.12
CD44-212ENST00000524922 IZUMO4Q1ZYL8 232 aa1.82□□□□□ -2.12
CD44-212ENST00000524922 MPEG1Q2M385 716 aa1.82□□□□□ -2.12
CD44-212ENST00000524922 P3H1Q32P28 736 aa1.82□□□□□ -2.12
CD44-212ENST00000524922 PLK5Q496M5 336 aa1.82□□□□□ -2.12
CD44-212ENST00000524922 ZNF672Q499Z4 452 aaPredicted RBP1.82□□□□□ -2.12
CD44-212ENST00000524922 ALG10Q5BKT4 473 aa1.82□□□□□ -2.12
CD44-212ENST00000524922 HERC4Q5GLZ8 1057 aaPredicted RBP1.82□□□□□ -2.12
CD44-212ENST00000524922 ARL13AQ5H913 290 aaPredicted RBP1.82□□□□□ -2.12
CD44-212ENST00000524922 ALG10BQ5I7T1 473 aa1.82□□□□□ -2.12
CD44-212ENST00000524922 FAM209BQ5JX69 171 aa1.82□□□□□ -2.12
CD44-212ENST00000524922 ERAP2Q6P179 960 aa1.82□□□□□ -2.12
CD44-212ENST00000524922 AAGABQ6PD74 315 aa1.82□□□□□ -2.12
CD44-212ENST00000524922 TMEM88Q6PEY1 159 aa1.82□□□□□ -2.12
CD44-212ENST00000524922 SPSB3Q6PJ21 355 aa1.82□□□□□ -2.12
CD44-212ENST00000524922 KIAA1324Q6UXG2 1013 aaKnown RBP1.82□□□□□ -2.12
CD44-212ENST00000524922 TRIM74Q86UV6 250 aa1.82□□□□□ -2.12
CD44-212ENST00000524922 TRIM73Q86UV7 250 aa1.82□□□□□ -2.12
CD44-212ENST00000524922 FAM217AQ8IXS0 508 aa1.82□□□□□ -2.12
CD44-212ENST00000524922 RFLNBQ8N5W9 214 aa1.82□□□□□ -2.12
CD44-212ENST00000524922 CCDC191Q8NCU4 936 aa1.82□□□□□ -2.12
CD44-212ENST00000524922 CCDC150Q8NCX0 1101 aa1.82□□□□□ -2.12
CD44-212ENST00000524922 CMASQ8NFW8 434 aaPredicted RBP1.82□□□□□ -2.12
CD44-212ENST00000524922 PHOSPHO2Q8TCD6 241 aa1.82□□□□□ -2.12
CD44-212ENST00000524922 PMM1Q92871 262 aa1.82□□□□□ -2.12
CD44-212ENST00000524922 ZKSCAN4Q969J2 545 aaPredicted RBP1.82□□□□□ -2.12
CD44-212ENST00000524922 TTC17Q96AE7 1141 aa1.82□□□□□ -2.12
CD44-212ENST00000524922 ZNF419Q96HQ0 510 aaPredicted RBP1.82□□□□□ -2.12
CD44-212ENST00000524922 DEFB118Q96PH6 123 aa1.82□□□□□ -2.12
CD44-212ENST00000524922 TBCBQ99426 244 aa1.82□□□□□ -2.12
CD44-212ENST00000524922 SARGQ9BW04 601 aa1.82□□□□□ -2.12
CD44-212ENST00000524922 C1QTNF4Q9BXJ3 329 aa1.82□□□□□ -2.12
CD44-212ENST00000524922 EIF2AQ9BY44 585 aaKnown RBP1.82□□□□□ -2.12
CD44-212ENST00000524922 UPF3BQ9BZI7 483 aaKnown RBP1.82□□□□□ -2.12
CD44-212ENST00000524922 CDT1Q9H211 546 aa1.82□□□□□ -2.12
CD44-212ENST00000524922 PNNQ9H307 717 aaKnown RBP1.82□□□□□ -2.12
CD44-212ENST00000524922 EPS8L2Q9H6S3 715 aa1.82□□□□□ -2.12
CD44-212ENST00000524922 DBNDD1Q9H9R9 158 aa1.82□□□□□ -2.12
CD44-212ENST00000524922 SDF2L1Q9HCN8 221 aa1.82□□□□□ -2.12
CD44-212ENST00000524922 TMEM248Q9NWD8 314 aa1.82□□□□□ -2.12
CD44-212ENST00000524922 GJD2Q9UKL4 321 aa1.82□□□□□ -2.12
CD44-212ENST00000524922 RAB21Q9UL25 225 aa1.82□□□□□ -2.12
CD44-212ENST00000524922 ICAM5Q9UMF0 924 aa1.82□□□□□ -2.12
CD44-212ENST00000524922 SLC12A4Q9UP95 1085 aa1.82□□□□□ -2.12
CD44-212ENST00000524922 SLC8A2Q9UPR5 921 aa1.82□□□□□ -2.12
CD44-212ENST00000524922 AGTPBP1Q9UPW5 1226 aa1.82□□□□□ -2.12
CD44-212ENST00000524922 TNFSF13BQ9Y275 285 aa1.82□□□□□ -2.12
CD44-212ENST00000524922 ELP1O95163 1332 aa1.82□□□□□ -2.12
CD44-212ENST00000524922 PDS5AQ29RF7 1337 aaKnown RBP1.82□□□□□ -2.12
CD44-212ENST00000524922 ZNF462Q96JM2 2506 aa1.82□□□□□ -2.12
CD44-212ENST00000524922 RFX7Q2KHR2 1363 aa1.82□□□□□ -2.12
CD44-212ENST00000524922 NUP98P52948 1817 aa1.82□□□□□ -2.12
CD44-212ENST00000524922 LTBP2Q14767 1821 aa1.82□□□□□ -2.12
CD44-212ENST00000524922 ZNF236Q9UL36 1845 aa1.82□□□□□ -2.12
CD44-212ENST00000524922 DNAH12Q6ZR08 3092 aa1.82□□□□□ -2.12
CD44-212ENST00000524922 ARAP2Q8WZ64 1704 aa1.81□□□□□ -2.12
CD44-212ENST00000524922 A0A0A0MQY5 61 aa1.81□□□□□ -2.12
CD44-212ENST00000524922 IGLV5-52A0A0A0MRZ9 124 aa1.81□□□□□ -2.12
CD44-212ENST00000524922 C17orf100A8MU93 164 aa1.81□□□□□ -2.12
CD44-212ENST00000524922 KIF28PB7ZC32 967 aa1.81□□□□□ -2.12
CD44-212ENST00000524922 RASA4BC9J798 803 aa1.81□□□□□ -2.12
CD44-212ENST00000524922 STMND1H3BQB6 276 aa1.81□□□□□ -2.12
CD44-212ENST00000524922 PDHXO00330 501 aa1.81□□□□□ -2.12
CD44-212ENST00000524922 PPM1GO15355 546 aaPredicted RBP1.81□□□□□ -2.12
CD44-212ENST00000524922 LINC01565O15544 149 aa1.81□□□□□ -2.12
CD44-212ENST00000524922 RASA4O43374 803 aa1.81□□□□□ -2.12
CD44-212ENST00000524922 STRNO43815 780 aa1.81□□□□□ -2.12
CD44-212ENST00000524922 PLA2G6O60733 806 aa1.81□□□□□ -2.12
CD44-212ENST00000524922 KRT36O76013 467 aa1.81□□□□□ -2.12
CD44-212ENST00000524922 PARNO95453 639 aaKnown RBP1.81□□□□□ -2.12
CD44-212ENST00000524922 CYP21A2P08686 494 aa1.81□□□□□ -2.12
CD44-212ENST00000524922 NPPBP16860 134 aa1.81□□□□□ -2.12
CD44-212ENST00000524922 TNFSF4P23510 183 aa1.81□□□□□ -2.12
CD44-212ENST00000524922 CST5P28325 142 aaPredicted RBP1.81□□□□□ -2.12
CD44-212ENST00000524922 RFC2P35250 354 aa1.81□□□□□ -2.12
CD44-212ENST00000524922 RGS2P41220 211 aa1.81□□□□□ -2.12
CD44-212ENST00000524922 PPP3CCP48454 512 aa1.81□□□□□ -2.12
CD44-212ENST00000524922 HSPA7P48741 367 aa1.81□□□□□ -2.12
CD44-212ENST00000524922 MRGPRG-AS1Q2M3A8 158 aa1.81□□□□□ -2.12
CD44-212ENST00000524922 SETMARQ53H47 684 aaPredicted RBP1.81□□□□□ -2.12
CD44-212ENST00000524922 OTUD1Q5VV17 481 aaPredicted RBP1.81□□□□□ -2.12
CD44-212ENST00000524922 WBP2NLQ6ICG8 309 aa1.81□□□□□ -2.12
CD44-212ENST00000524922 KLBQ86Z14 1044 aa1.81□□□□□ -2.12
CD44-212ENST00000524922 ANKRD18AQ8IVF6 992 aa1.81□□□□□ -2.12
CD44-212ENST00000524922 LRRC57Q8N9N7 239 aa1.81□□□□□ -2.12
CD44-212ENST00000524922 TMEM163Q8TC26 289 aa1.81□□□□□ -2.12
CD44-212ENST00000524922 FAM216AQ8WUB2 273 aa1.81□□□□□ -2.12
CD44-212ENST00000524922 TMEM255BQ8WV15 326 aa1.81□□□□□ -2.12
CD44-212ENST00000524922 IDI2Q9BXS1 227 aa1.81□□□□□ -2.12
CD44-212ENST00000524922 STK33Q9BYT3 514 aa1.81□□□□□ -2.12
CD44-212ENST00000524922 TP63Q9H3D4 680 aaPredicted RBP1.81□□□□□ -2.12
CD44-212ENST00000524922 HIPK3Q9H422 1215 aa1.81□□□□□ -2.12
CD44-212ENST00000524922 CATSPERBQ9H7T0 1116 aa1.81□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms