RNA–Protein interactions for RNA: ENST00000523814.5

SPIDR-221, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 5

Gene SPIDR, Length 802 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-221ENST00000523814 AP1S1P61966 158 aa16.89■□□□□ 0.29
SPIDR-221ENST00000523814 RALGDSQ12967 914 aa16.89■□□□□ 0.29
SPIDR-221ENST00000523814 IQCB1Q15051 598 aa16.89■□□□□ 0.29
SPIDR-221ENST00000523814 DPYSL2Q16555 572 aa16.89■□□□□ 0.29
SPIDR-221ENST00000523814 LIPIQ6XZB0 460 aa16.89■□□□□ 0.29
SPIDR-221ENST00000523814 TP53INP2Q8IXH6 220 aa16.89■□□□□ 0.29
SPIDR-221ENST00000523814 ARL10Q8N8L6 244 aa16.89■□□□□ 0.29
SPIDR-221ENST00000523814 PLA2G15Q8NCC3 412 aa16.89■□□□□ 0.29
SPIDR-221ENST00000523814 ZNF653Q96CK0 615 aa16.89■□□□□ 0.29
SPIDR-221ENST00000523814 NSMCE3Q96MG7 304 aa16.89■□□□□ 0.29
SPIDR-221ENST00000523814 WDR92Q96MX6 357 aa16.89■□□□□ 0.29
SPIDR-221ENST00000523814 SLC46A1Q96NT5 459 aa16.89■□□□□ 0.29
SPIDR-221ENST00000523814 FCRL3Q96P31 734 aaPredicted RBP16.89■□□□□ 0.29
SPIDR-221ENST00000523814 CCDC3Q9BQI4 270 aa16.89■□□□□ 0.29
SPIDR-221ENST00000523814 ZWILCHQ9H900 591 aa16.89■□□□□ 0.29
SPIDR-221ENST00000523814 SEPT3Q9UH03 358 aa16.89■□□□□ 0.29
SPIDR-221ENST00000523814 DOLKQ9UPQ8 538 aa16.89■□□□□ 0.29
SPIDR-221ENST00000523814 SATB2Q9UPW6 733 aa16.89■□□□□ 0.29
SPIDR-221ENST00000523814 H3BRJ5 948 aa16.88■□□□□ 0.29
SPIDR-221ENST00000523814 RECQL5O94762 991 aaPredicted RBP16.88■□□□□ 0.29
SPIDR-221ENST00000523814 IL1R2P27930 398 aa16.88■□□□□ 0.29
SPIDR-221ENST00000523814 TRIM23P36406 574 aa16.88■□□□□ 0.29
SPIDR-221ENST00000523814 SCNN1BP51168 640 aa16.88■□□□□ 0.29
SPIDR-221ENST00000523814 SLC10A7Q0GE19 358 aa16.88■□□□□ 0.29
SPIDR-221ENST00000523814 LBRQ14739 615 aaKnown RBP16.88■□□□□ 0.29
SPIDR-221ENST00000523814 TMCO4Q5TGY1 634 aa16.88■□□□□ 0.29
SPIDR-221ENST00000523814 CRTC1Q6UUV9 634 aa16.88■□□□□ 0.29
SPIDR-221ENST00000523814 NYAP1Q6ZVC0 841 aa16.88■□□□□ 0.29
SPIDR-221ENST00000523814 DPPA4Q7L190 304 aa16.88■□□□□ 0.29
SPIDR-221ENST00000523814 GPR155Q7Z3F1 870 aa16.88■□□□□ 0.29
SPIDR-221ENST00000523814 RD3Q7Z3Z2 195 aa16.88■□□□□ 0.29
SPIDR-221ENST00000523814 POLNQ7Z5Q5 900 aa16.88■□□□□ 0.29
SPIDR-221ENST00000523814 GKN2Q86XP6 184 aa16.88■□□□□ 0.29
SPIDR-221ENST00000523814 LSM14AQ8ND56 463 aaKnown RBP16.88■□□□□ 0.29
SPIDR-221ENST00000523814 PRR11Q96HE9 360 aaPredicted RBP16.88■□□□□ 0.29
SPIDR-221ENST00000523814 RBM15Q96T37 977 aaKnown RBP eCLIP16.88■□□□□ 0.29
SPIDR-221ENST00000523814 LGMNQ99538 433 aa16.88■□□□□ 0.29
SPIDR-221ENST00000523814 THSD1Q9NS62 852 aa16.88■□□□□ 0.29
SPIDR-221ENST00000523814 MYO1AQ9UBC5 1043 aa16.88■□□□□ 0.29
SPIDR-221ENST00000523814 GULP1Q9UBP9 304 aa16.88■□□□□ 0.29
SPIDR-221ENST00000523814 KLQ9UEF7 1012 aa16.88■□□□□ 0.29
SPIDR-221ENST00000523814 PCDHGA8Q9Y5G5 932 aa16.88■□□□□ 0.29
SPIDR-221ENST00000523814 PTPRQQ9UMZ3 2332 aa16.87■□□□□ 0.29
SPIDR-221ENST00000523814 COL27A1Q8IZC6 1860 aaPredicted RBP16.87■□□□□ 0.29
SPIDR-221ENST00000523814 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP16.87■□□□□ 0.29
SPIDR-221ENST00000523814 EIF4E1BA6NMX2 242 aaKnown RBP16.87■□□□□ 0.29
SPIDR-221ENST00000523814 NTN3O00634 580 aaPredicted RBP16.87■□□□□ 0.29
SPIDR-221ENST00000523814 TNFRSF10CO14798 259 aa16.87■□□□□ 0.29
SPIDR-221ENST00000523814 CASC3O15234 703 aaKnown RBP16.87■□□□□ 0.29
SPIDR-221ENST00000523814 ATXN7O15265 892 aaPredicted RBP16.87■□□□□ 0.29
SPIDR-221ENST00000523814 PEX11BO96011 259 aa16.87■□□□□ 0.29
SPIDR-221ENST00000523814 TNFP01375 233 aa16.87■□□□□ 0.29
SPIDR-221ENST00000523814 PCCBP05166 539 aa16.87■□□□□ 0.29
SPIDR-221ENST00000523814 GM2AP17900 193 aa16.87■□□□□ 0.29
SPIDR-221ENST00000523814 AMPD1P23109 780 aa16.87■□□□□ 0.29
SPIDR-221ENST00000523814 RBMS1P29558 406 aaKnown RBP16.87■□□□□ 0.29
SPIDR-221ENST00000523814 KIAA1024LP59773 190 aa16.87■□□□□ 0.29
SPIDR-221ENST00000523814 PIGHQ14442 188 aaPredicted RBP16.87■□□□□ 0.29
SPIDR-221ENST00000523814 HGSNATQ68CP4 663 aa16.87■□□□□ 0.29
SPIDR-221ENST00000523814 KCTD16Q68DU8 428 aa16.87■□□□□ 0.29
SPIDR-221ENST00000523814 KYQ8NBH2 561 aa16.87■□□□□ 0.29
SPIDR-221ENST00000523814 PCDH19Q8TAB3 1148 aa16.87■□□□□ 0.29
SPIDR-221ENST00000523814 SYN2Q92777 582 aaPredicted RBP16.87■□□□□ 0.29
SPIDR-221ENST00000523814 FUBP1Q96AE4 644 aaKnown RBP16.87■□□□□ 0.29
SPIDR-221ENST00000523814 FUCA2Q9BTY2 467 aa16.87■□□□□ 0.29
SPIDR-221ENST00000523814 DPH1Q9BZG8 443 aa16.87■□□□□ 0.29
SPIDR-221ENST00000523814 GPR34Q9UPC5 381 aa16.87■□□□□ 0.29
SPIDR-221ENST00000523814 SSUH2Q9Y2M2 353 aa16.87■□□□□ 0.29
SPIDR-221ENST00000523814 BZW2Q9Y6E2 419 aaKnown RBP16.87■□□□□ 0.29
SPIDR-221ENST00000523814 LRRK1Q38SD2 2015 aa16.87■□□□□ 0.29
SPIDR-221ENST00000523814 TEX51A0A1B0GUA7 166 aa16.86■□□□□ 0.29
SPIDR-221ENST00000523814 A0A1W2PQ67 120 aa16.86■□□□□ 0.29
SPIDR-221ENST00000523814 TMEM202A6NGA9 273 aa16.86■□□□□ 0.29
SPIDR-221ENST00000523814 HTRA2O43464 458 aaPredicted RBP16.86■□□□□ 0.29
SPIDR-221ENST00000523814 SERPINC1P01008 464 aa16.86■□□□□ 0.29
SPIDR-221ENST00000523814 ELFN1P0C7U0 828 aa16.86■□□□□ 0.29
SPIDR-221ENST00000523814 TCF4P15884 667 aa16.86■□□□□ 0.29
SPIDR-221ENST00000523814 CR2P20023 1033 aa16.86■□□□□ 0.29
SPIDR-221ENST00000523814 HSPA9P38646 679 aaKnown RBP16.86■□□□□ 0.29
SPIDR-221ENST00000523814 ARL4AP40617 200 aa16.86■□□□□ 0.29
SPIDR-221ENST00000523814 MLLT3P42568 568 aaPredicted RBP16.86■□□□□ 0.29
SPIDR-221ENST00000523814 PDX1P52945 283 aa16.86■□□□□ 0.29
SPIDR-221ENST00000523814 SKOR1P84550 965 aa16.86■□□□□ 0.29
SPIDR-221ENST00000523814 SPIDRQ14159 915 aa16.86■□□□□ 0.29
SPIDR-221ENST00000523814 C3orf38Q5JPI3 329 aa16.86■□□□□ 0.29
SPIDR-221ENST00000523814 CAVIN1Q6NZI2 390 aaKnown RBP16.86■□□□□ 0.29
SPIDR-221ENST00000523814 OGFOD3Q6PK18 319 aa16.86■□□□□ 0.29
SPIDR-221ENST00000523814 CBARPQ8N350 705 aaPredicted RBP16.86■□□□□ 0.29
SPIDR-221ENST00000523814 OR6C4Q8NGE1 309 aa16.86■□□□□ 0.29
SPIDR-221ENST00000523814 OR56A4Q8NGH8 313 aa16.86■□□□□ 0.29
SPIDR-221ENST00000523814 WDR36Q8NI36 951 aaKnown RBP16.86■□□□□ 0.29
SPIDR-221ENST00000523814 TEKT4Q8WW24 435 aa16.86■□□□□ 0.29
SPIDR-221ENST00000523814 OR1E3Q8WZA6 343 aa16.86■□□□□ 0.29
SPIDR-221ENST00000523814 NAF1Q96HR8 494 aaKnown RBP16.86■□□□□ 0.29
SPIDR-221ENST00000523814 ETNK2Q9NVF9 386 aa16.86■□□□□ 0.29
SPIDR-221ENST00000523814 SIRPGQ9P1W8 387 aa16.86■□□□□ 0.29
SPIDR-221ENST00000523814 RABGEF1Q9UJ41 708 aa16.86■□□□□ 0.29
SPIDR-221ENST00000523814 SMG1Q96Q15 3661 aaKnown RBP16.85■□□□□ 0.29
SPIDR-221ENST00000523814 A0A1W2PQJ5 194 aa16.85■□□□□ 0.29
SPIDR-221ENST00000523814 TTC24A2A3L6 582 aaPredicted RBP16.85■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms