RNA–Protein interactions for RNA: ENST00000522987.1

MRPS28-209, Transcript of mitochondrial ribosomal protein S28, humanhuman

TSL 3

Gene MRPS28, Length 487 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS28-209ENST00000522987 CLN3Q13286 438 aa15.52■□□□□ 0.08
MRPS28-209ENST00000522987 PPP6R3Q5H9R7 873 aaPredicted RBP15.52■□□□□ 0.08
MRPS28-209ENST00000522987 DENND2CQ68D51 928 aa15.52■□□□□ 0.08
MRPS28-209ENST00000522987 SASS6Q6UVJ0 657 aa15.52■□□□□ 0.08
MRPS28-209ENST00000522987 TAF8Q7Z7C8 310 aa15.52■□□□□ 0.08
MRPS28-209ENST00000522987 GKN2Q86XP6 184 aa15.52■□□□□ 0.08
MRPS28-209ENST00000522987 FBXO39Q8N4B4 442 aa15.52■□□□□ 0.08
MRPS28-209ENST00000522987 NPWQ8N729 165 aa15.52■□□□□ 0.08
MRPS28-209ENST00000522987 LSM14AQ8ND56 463 aaKnown RBP15.52■□□□□ 0.08
MRPS28-209ENST00000522987 ANKRD20A12PQ8NF67 263 aa15.52■□□□□ 0.08
MRPS28-209ENST00000522987 CCL4L1Q8NHW4 92 aa15.52■□□□□ 0.08
MRPS28-209ENST00000522987 NSMCE3Q96MG7 304 aa15.52■□□□□ 0.08
MRPS28-209ENST00000522987 CINPQ9BW66 212 aaPredicted RBP15.52■□□□□ 0.08
MRPS28-209ENST00000522987 SP110Q9HB58 689 aa15.52■□□□□ 0.08
MRPS28-209ENST00000522987 FGF22Q9HCT0 170 aa15.52■□□□□ 0.08
MRPS28-209ENST00000522987 PISDQ9UG56 409 aa15.52■□□□□ 0.08
MRPS28-209ENST00000522987 PIEZO2Q9H5I5 2752 aa15.52■□□□□ 0.07
MRPS28-209ENST00000522987 AHCTF1Q8WYP5 2266 aa15.51■□□□□ 0.07
MRPS28-209ENST00000522987 TSPAN11A1L157 253 aa15.51■□□□□ 0.07
MRPS28-209ENST00000522987 ARHGAP42A6NI28 874 aa15.51■□□□□ 0.07
MRPS28-209ENST00000522987 D6RAR5 112 aa15.51■□□□□ 0.07
MRPS28-209ENST00000522987 PLD2O14939 933 aa15.51■□□□□ 0.07
MRPS28-209ENST00000522987 TEX33O43247 280 aa15.51■□□□□ 0.07
MRPS28-209ENST00000522987 RECQL5O94762 991 aaPredicted RBP15.51■□□□□ 0.07
MRPS28-209ENST00000522987 ATP1A3P13637 1013 aa15.51■□□□□ 0.07
MRPS28-209ENST00000522987 ITIH1P19827 911 aa15.51■□□□□ 0.07
MRPS28-209ENST00000522987 SLC5A2P31639 672 aa15.51■□□□□ 0.07
MRPS28-209ENST00000522987 UGT1A5P35504 534 aa15.51■□□□□ 0.07
MRPS28-209ENST00000522987 PEX5P50542 639 aa15.51■□□□□ 0.07
MRPS28-209ENST00000522987 INHBCP55103 352 aa15.51■□□□□ 0.07
MRPS28-209ENST00000522987 MYL5Q02045 173 aa15.51■□□□□ 0.07
MRPS28-209ENST00000522987 CCDC81Q6ZN84 652 aa15.51■□□□□ 0.07
MRPS28-209ENST00000522987 RAB11FIP2Q7L804 512 aa15.51■□□□□ 0.07
MRPS28-209ENST00000522987 AOPEPQ8N6M6 819 aa15.51■□□□□ 0.07
MRPS28-209ENST00000522987 ARFGAP1Q8N6T3 406 aa15.51■□□□□ 0.07
MRPS28-209ENST00000522987 FAM46DQ8NEK8 389 aa15.51■□□□□ 0.07
MRPS28-209ENST00000522987 TTC9Q92623 222 aa15.51■□□□□ 0.07
MRPS28-209ENST00000522987 TBATAQ96M53 351 aa15.51■□□□□ 0.07
MRPS28-209ENST00000522987 LGR4Q9BXB1 951 aa15.51■□□□□ 0.07
MRPS28-209ENST00000522987 TMEM168Q9H0V1 697 aa15.51■□□□□ 0.07
MRPS28-209ENST00000522987 LRRN3Q9H3W5 708 aa15.51■□□□□ 0.07
MRPS28-209ENST00000522987 ATP13A3Q9H7F0 1226 aa15.51■□□□□ 0.07
MRPS28-209ENST00000522987 TMEM110-MUSTN1A8MSY1 372 aa15.5■□□□□ 0.07
MRPS28-209ENST00000522987 TOR1BO14657 336 aa15.5■□□□□ 0.07
MRPS28-209ENST00000522987 ELFN1P0C7U0 828 aa15.5■□□□□ 0.07
MRPS28-209ENST00000522987 FERP16591 822 aa15.5■□□□□ 0.07
MRPS28-209ENST00000522987 ERCC2P18074 760 aa15.5■□□□□ 0.07
MRPS28-209ENST00000522987 SERPINA4P29622 427 aa15.5■□□□□ 0.07
MRPS28-209ENST00000522987 SCNN1BP51168 640 aa15.5■□□□□ 0.07
MRPS28-209ENST00000522987 NDST2P52849 883 aa15.5■□□□□ 0.07
MRPS28-209ENST00000522987 SKOR1P84550 965 aa15.5■□□□□ 0.07
MRPS28-209ENST00000522987 BCL2L1Q07817 233 aa15.5■□□□□ 0.07
MRPS28-209ENST00000522987 MAMLD1Q13495 774 aa15.5■□□□□ 0.07
MRPS28-209ENST00000522987 MTM1Q13496 603 aa15.5■□□□□ 0.07
MRPS28-209ENST00000522987 ACOX1Q15067 660 aa15.5■□□□□ 0.07
MRPS28-209ENST00000522987 PTPRRQ15256 657 aa15.5■□□□□ 0.07
MRPS28-209ENST00000522987 BRAT1Q6PJG6 821 aa15.5■□□□□ 0.07
MRPS28-209ENST00000522987 IGF2-ASQ6U949 168 aa15.5■□□□□ 0.07
MRPS28-209ENST00000522987 LIPIQ6XZB0 460 aa15.5■□□□□ 0.07
MRPS28-209ENST00000522987 RFX8Q6ZV50 586 aa15.5■□□□□ 0.07
MRPS28-209ENST00000522987 CLEC14AQ86T13 490 aa15.5■□□□□ 0.07
MRPS28-209ENST00000522987 CCNJLQ8IV13 435 aa15.5■□□□□ 0.07
MRPS28-209ENST00000522987 ARHGAP12Q8IWW6 846 aa15.5■□□□□ 0.07
MRPS28-209ENST00000522987 PDCD6IPQ8WUM4 868 aaKnown RBP15.5■□□□□ 0.07
MRPS28-209ENST00000522987 ZNF641Q96N77 438 aaPredicted RBP15.5■□□□□ 0.07
MRPS28-209ENST00000522987 ERGIC2Q96RQ1 377 aa15.5■□□□□ 0.07
MRPS28-209ENST00000522987 CYP4F12Q9HCS2 524 aa15.5■□□□□ 0.07
MRPS28-209ENST00000522987 SDK2Q58EX2 2172 aa15.49■□□□□ 0.07
MRPS28-209ENST00000522987 TENM4Q6N022 2769 aa15.49■□□□□ 0.07
MRPS28-209ENST00000522987 K7ENP7 123 aa15.49■□□□□ 0.07
MRPS28-209ENST00000522987 CACNB4O00305 520 aaPredicted RBP15.49■□□□□ 0.07
MRPS28-209ENST00000522987 ITGA2BP08514 1039 aa15.49■□□□□ 0.07
MRPS28-209ENST00000522987 DESP17661 470 aa15.49■□□□□ 0.07
MRPS28-209ENST00000522987 GM2AP17900 193 aa15.49■□□□□ 0.07
MRPS28-209ENST00000522987 ETV5P41161 510 aa15.49■□□□□ 0.07
MRPS28-209ENST00000522987 SUOXP51687 545 aa15.49■□□□□ 0.07
MRPS28-209ENST00000522987 MAZP56270 477 aaKnown RBP15.49■□□□□ 0.07
MRPS28-209ENST00000522987 GRM3Q14832 879 aa15.49■□□□□ 0.07
MRPS28-209ENST00000522987 STX1AQ16623 288 aa15.49■□□□□ 0.07
MRPS28-209ENST00000522987 ERMARDQ5T6L9 678 aa15.49■□□□□ 0.07
MRPS28-209ENST00000522987 INO80CQ6PI98 192 aaPredicted RBP15.49■□□□□ 0.07
MRPS28-209ENST00000522987 APTXQ7Z2E3 356 aaKnown RBP15.49■□□□□ 0.07
MRPS28-209ENST00000522987 TMPRSS9Q7Z410 1059 aa15.49■□□□□ 0.07
MRPS28-209ENST00000522987 IRF2BP2Q7Z5L9 587 aa15.49■□□□□ 0.07
MRPS28-209ENST00000522987 OR56A4Q8NGH8 313 aa15.49■□□□□ 0.07
MRPS28-209ENST00000522987 WDR48Q8TAF3 677 aa15.49■□□□□ 0.07
MRPS28-209ENST00000522987 GRAMD1AQ96CP6 724 aa15.49■□□□□ 0.07
MRPS28-209ENST00000522987 CCDC97Q96F63 343 aaPredicted RBP15.49■□□□□ 0.07
MRPS28-209ENST00000522987 LIN37Q96GY3 246 aaPredicted RBP15.49■□□□□ 0.07
MRPS28-209ENST00000522987 TUBGCP5Q96RT8 1024 aa15.49■□□□□ 0.07
MRPS28-209ENST00000522987 RBM15Q96T37 977 aaKnown RBP eCLIP15.49■□□□□ 0.07
MRPS28-209ENST00000522987 HSD3B7Q9H2F3 369 aa15.49■□□□□ 0.07
MRPS28-209ENST00000522987 DPEP2Q9H4A9 486 aa15.49■□□□□ 0.07
MRPS28-209ENST00000522987 ANO10Q9NW15 660 aa15.49■□□□□ 0.07
MRPS28-209ENST00000522987 MYO1AQ9UBC5 1043 aa15.49■□□□□ 0.07
MRPS28-209ENST00000522987 LOXL2Q9Y4K0 774 aa15.49■□□□□ 0.07
MRPS28-209ENST00000522987 RNF215Q9Y6U7 377 aa15.49■□□□□ 0.07
MRPS28-209ENST00000522987 A0A0U1RQS6 177 aa15.48■□□□□ 0.07
MRPS28-209ENST00000522987 GOLGA6CA6NDK9 693 aa15.48■□□□□ 0.07
MRPS28-209ENST00000522987 GOLGA6BA6NDN3 693 aa15.48■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms