RNA–Protein interactions for RNA: ENST00000522658.5

PABPC1-220, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 2

Gene PABPC1, Length 736 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-220ENST00000522658 PTK2BQ14289 1009 aa6.36□□□□□ -1.39
PABPC1-220ENST00000522658 DLG2Q15700 870 aa6.36□□□□□ -1.39
PABPC1-220ENST00000522658 CNGA2Q16280 664 aa6.36□□□□□ -1.39
PABPC1-220ENST00000522658 CBWD6Q4V339 395 aa6.36□□□□□ -1.39
PABPC1-220ENST00000522658 CBWD3Q5JTY5 395 aa6.36□□□□□ -1.39
PABPC1-220ENST00000522658 CBWD5Q5RIA9 395 aa6.36□□□□□ -1.39
PABPC1-220ENST00000522658 KIAA1614Q5VZ46 1190 aa6.36□□□□□ -1.39
PABPC1-220ENST00000522658 OR6B2Q6IFH4 312 aa6.36□□□□□ -1.39
PABPC1-220ENST00000522658 KIAA1161Q6NSJ0 714 aa6.36□□□□□ -1.39
PABPC1-220ENST00000522658 PMF1Q6P1K2 205 aa6.36□□□□□ -1.39
PABPC1-220ENST00000522658 INO80CQ6PI98 192 aaPredicted RBP6.36□□□□□ -1.39
PABPC1-220ENST00000522658 LRRC31Q6UY01 552 aa6.36□□□□□ -1.39
PABPC1-220ENST00000522658 KYAT3Q6YP21 454 aaKnown RBP6.36□□□□□ -1.39
PABPC1-220ENST00000522658 ATG14Q6ZNE5 492 aa6.36□□□□□ -1.39
PABPC1-220ENST00000522658 ZNF548Q8NEK5 533 aaPredicted RBP6.36□□□□□ -1.39
PABPC1-220ENST00000522658 BTN2A2Q8WVV5 523 aa6.36□□□□□ -1.39
PABPC1-220ENST00000522658 ARRDC3Q96B67 414 aa6.36□□□□□ -1.39
PABPC1-220ENST00000522658 HIC2Q96JB3 615 aa6.36□□□□□ -1.39
PABPC1-220ENST00000522658 FRMD6Q96NE9 622 aa6.36□□□□□ -1.39
PABPC1-220ENST00000522658 CCNL2Q96S94 520 aaPredicted RBP6.36□□□□□ -1.39
PABPC1-220ENST00000522658 C1QTNF7Q9BXJ2 289 aa6.36□□□□□ -1.39
PABPC1-220ENST00000522658 SLC13A1Q9BZW2 595 aa6.36□□□□□ -1.39
PABPC1-220ENST00000522658 TRIM4Q9C037 500 aa6.36□□□□□ -1.39
PABPC1-220ENST00000522658 EPB41L5Q9HCM4 733 aa6.36□□□□□ -1.39
PABPC1-220ENST00000522658 UCKL1Q9NWZ5 548 aa6.36□□□□□ -1.39
PABPC1-220ENST00000522658 AKAP7Q9P0M2 348 aaPredicted RBP6.36□□□□□ -1.39
PABPC1-220ENST00000522658 SPASTQ9UBP0 616 aa6.36□□□□□ -1.39
PABPC1-220ENST00000522658 APOBEC3BQ9UH17 382 aaKnown RBP6.36□□□□□ -1.39
PABPC1-220ENST00000522658 IL36AQ9UHA7 158 aa6.36□□□□□ -1.39
PABPC1-220ENST00000522658 NAALADL1Q9UQQ1 740 aa6.36□□□□□ -1.39
PABPC1-220ENST00000522658 KCNU1A8MYU2 1149 aa6.35□□□□□ -1.39
PABPC1-220ENST00000522658 NPIPB6E9PJ23 425 aa6.35□□□□□ -1.39
PABPC1-220ENST00000522658 TMX2-CTNND1H3BSU7 103 aa6.35□□□□□ -1.39
PABPC1-220ENST00000522658 K7ESM1 405 aa6.35□□□□□ -1.39
PABPC1-220ENST00000522658 PSMA7O14818 248 aa6.35□□□□□ -1.39
PABPC1-220ENST00000522658 MCF2LO15068 1137 aa6.35□□□□□ -1.39
PABPC1-220ENST00000522658 NEBLO76041 1014 aa6.35□□□□□ -1.39
PABPC1-220ENST00000522658 TNFSF15O95150 251 aa6.35□□□□□ -1.39
PABPC1-220ENST00000522658 LETM1O95202 739 aaPredicted RBP6.35□□□□□ -1.39
PABPC1-220ENST00000522658 ITGA2BP08514 1039 aa6.35□□□□□ -1.39
PABPC1-220ENST00000522658 CTSEP14091 401 aa6.35□□□□□ -1.39
PABPC1-220ENST00000522658 XPAP23025 273 aaPredicted RBP6.35□□□□□ -1.39
PABPC1-220ENST00000522658 GNA15P30679 374 aa6.35□□□□□ -1.39
PABPC1-220ENST00000522658 CHRNA3P32297 505 aa6.35□□□□□ -1.39
PABPC1-220ENST00000522658 PPP1R2P41236 205 aa6.35□□□□□ -1.39
PABPC1-220ENST00000522658 FMO5P49326 533 aa6.35□□□□□ -1.39
PABPC1-220ENST00000522658 PPM1FP49593 454 aaPredicted RBP6.35□□□□□ -1.39
PABPC1-220ENST00000522658 METAP1P53582 386 aa6.35□□□□□ -1.39
PABPC1-220ENST00000522658 CLDN2P57739 230 aa6.35□□□□□ -1.39
PABPC1-220ENST00000522658 YWHAZP63104 245 aaKnown RBP6.35□□□□□ -1.39
PABPC1-220ENST00000522658 RPS21P63220 83 aaKnown RBP6.35□□□□□ -1.39
PABPC1-220ENST00000522658 LRRC63Q05C16 580 aa6.35□□□□□ -1.39
PABPC1-220ENST00000522658 NME3Q13232 169 aa6.35□□□□□ -1.39
PABPC1-220ENST00000522658 EIF3IQ13347 325 aaKnown RBP6.35□□□□□ -1.39
PABPC1-220ENST00000522658 PDE1CQ14123 709 aaPredicted RBP6.35□□□□□ -1.39
PABPC1-220ENST00000522658 SEPT6Q14141 434 aa6.35□□□□□ -1.39
PABPC1-220ENST00000522658 ISXQ2M1V0 245 aa6.35□□□□□ -1.39
PABPC1-220ENST00000522658 DEFB133Q30KQ1 61 aa6.35□□□□□ -1.39
PABPC1-220ENST00000522658 ZNF542PQ5EBM4 170 aa6.35□□□□□ -1.39
PABPC1-220ENST00000522658 MANEAQ5SRI9 462 aa6.35□□□□□ -1.39
PABPC1-220ENST00000522658 LCE5AQ5TCM9 118 aa6.35□□□□□ -1.39
PABPC1-220ENST00000522658 GUSBP11Q6P575 273 aa6.35□□□□□ -1.39
PABPC1-220ENST00000522658 CRTC1Q6UUV9 634 aa6.35□□□□□ -1.39
PABPC1-220ENST00000522658 Q6ZSR6 202 aa6.35□□□□□ -1.39
PABPC1-220ENST00000522658 ERN2Q76MJ5 926 aaKnown RBP6.35□□□□□ -1.39
PABPC1-220ENST00000522658 KANSL1Q7Z3B3 1105 aa6.35□□□□□ -1.39
PABPC1-220ENST00000522658 ZNF354CQ86Y25 554 aa6.35□□□□□ -1.39
PABPC1-220ENST00000522658 RYBPQ8N488 228 aaPredicted RBP6.35□□□□□ -1.39
PABPC1-220ENST00000522658 SH2D3CQ8N5H7 860 aa6.35□□□□□ -1.39
PABPC1-220ENST00000522658 TMEM145Q8NBT3 493 aa6.35□□□□□ -1.39
PABPC1-220ENST00000522658 DNAJB8Q8NHS0 232 aa6.35□□□□□ -1.39
PABPC1-220ENST00000522658 SLC35F5Q8WV83 523 aa6.35□□□□□ -1.39
PABPC1-220ENST00000522658 ARHGEF26Q96DR7 871 aa6.35□□□□□ -1.39
PABPC1-220ENST00000522658 ATXN7L3BQ96GX2 97 aa6.35□□□□□ -1.39
PABPC1-220ENST00000522658 FEM1CQ96JP0 617 aa6.35□□□□□ -1.39
PABPC1-220ENST00000522658 SIK2Q9H0K1 926 aa6.35□□□□□ -1.39
PABPC1-220ENST00000522658 PDCL3Q9H2J4 239 aa6.35□□□□□ -1.39
PABPC1-220ENST00000522658 EPB41L4BQ9H329 900 aa6.35□□□□□ -1.39
PABPC1-220ENST00000522658 ARHGAP20Q9P2F6 1191 aa6.35□□□□□ -1.39
PABPC1-220ENST00000522658 XPO7Q9UIA9 1087 aaKnown RBP6.35□□□□□ -1.39
PABPC1-220ENST00000522658 SARDHQ9UL12 918 aa6.35□□□□□ -1.39
PABPC1-220ENST00000522658 VANGL2Q9ULK5 521 aa6.35□□□□□ -1.39
PABPC1-220ENST00000522658 STAP1Q9ULZ2 295 aa6.35□□□□□ -1.39
PABPC1-220ENST00000522658 PCDHGA8Q9Y5G5 932 aa6.35□□□□□ -1.39
PABPC1-220ENST00000522658 CABIN1Q9Y6J0 2220 aa6.34□□□□□ -1.39
PABPC1-220ENST00000522658 E5RJQ4 531 aa6.34□□□□□ -1.39
PABPC1-220ENST00000522658 PLD2O14939 933 aa6.34□□□□□ -1.39
PABPC1-220ENST00000522658 HSF2BPO75031 334 aa6.34□□□□□ -1.39
PABPC1-220ENST00000522658 PPFIA2O75334 1257 aa6.34□□□□□ -1.39
PABPC1-220ENST00000522658 NTRK1P04629 796 aa6.34□□□□□ -1.39
PABPC1-220ENST00000522658 TMEM253P0C7T8 217 aa6.34□□□□□ -1.39
PABPC1-220ENST00000522658 MYF5P13349 255 aa6.34□□□□□ -1.39
PABPC1-220ENST00000522658 RAC2P15153 192 aa6.34□□□□□ -1.39
PABPC1-220ENST00000522658 RRM1P23921 792 aa6.34□□□□□ -1.39
PABPC1-220ENST00000522658 USP8P40818 1118 aa6.34□□□□□ -1.39
PABPC1-220ENST00000522658 NOP2P46087 812 aaKnown RBP6.34□□□□□ -1.39
PABPC1-220ENST00000522658 BLKP51451 505 aa6.34□□□□□ -1.39
PABPC1-220ENST00000522658 NDUFA8P51970 172 aa6.34□□□□□ -1.39
PABPC1-220ENST00000522658 CDH4P55283 916 aa6.34□□□□□ -1.39
PABPC1-220ENST00000522658 GCNT1Q02742 428 aa6.34□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 62.1 ms