RNA–Protein interactions for RNA: ENST00000522653.5

TCF7-223, Transcript of transcription factor 7, human

TSL 2

Gene TCF7, Length 5,340 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TCF7-223	ENST00000522653	OTUD4	Q01804	1114 aa	Known RBP	10.38	□□□□□ -0.75
TCF7-223	ENST00000522653	MSLN	Q13421	630 aa	Predicted RBP	10.38	□□□□□ -0.75
TCF7-223	ENST00000522653	LRMDA	Q9H2I8	198 aa		10.38	□□□□□ -0.75
TCF7-223	ENST00000522653	TMEM245	Q9H330	911 aa		10.38	□□□□□ -0.75
TCF7-223	ENST00000522653	ADPRHL2	Q9NX46	363 aa		10.38	□□□□□ -0.75
TCF7-223	ENST00000522653	PPIE	Q9UNP9	301 aa	Known RBP	10.38	□□□□□ -0.75
TCF7-223	ENST00000522653	SHPRH	Q149N8	1683 aa		10.38	□□□□□ -0.75
TCF7-223	ENST00000522653	CPED1	A4D0V7	1026 aa		10.38	□□□□□ -0.75
TCF7-223	ENST00000522653	PROSC	O94903	275 aa		10.38	□□□□□ -0.75
TCF7-223	ENST00000522653	SLC35G6	P0C7Q6	338 aa		10.38	□□□□□ -0.75
TCF7-223	ENST00000522653	IRF8	Q02556	426 aa		10.38	□□□□□ -0.75
TCF7-223	ENST00000522653	LGALS3BP	Q08380	585 aa		10.38	□□□□□ -0.75
TCF7-223	ENST00000522653	INTS6L	Q5JSJ4	861 aa	Known RBP	10.38	□□□□□ -0.75
TCF7-223	ENST00000522653	CAPN13	Q6MZZ7	669 aa	Predicted RBP	10.38	□□□□□ -0.75
TCF7-223	ENST00000522653	FAM45BP	Q6NSW5	357 aa		10.38	□□□□□ -0.75
TCF7-223	ENST00000522653	FAM220A	Q7Z4H9	259 aa		10.38	□□□□□ -0.75
TCF7-223	ENST00000522653	MILR1	Q7Z6M3	343 aa		10.38	□□□□□ -0.75
TCF7-223	ENST00000522653	RAVER1	Q8IY67	606 aa	Known RBP	10.38	□□□□□ -0.75
TCF7-223	ENST00000522653	DBF4B	Q8NFT6	615 aa		10.38	□□□□□ -0.75
TCF7-223	ENST00000522653	FAM45A	Q8TCE6	357 aa		10.38	□□□□□ -0.75
TCF7-223	ENST00000522653	PROX1	Q92786	737 aa		10.38	□□□□□ -0.75
TCF7-223	ENST00000522653	AZIN2	Q96A70	460 aa		10.38	□□□□□ -0.75
TCF7-223	ENST00000522653	TUBGCP3	Q96CW5	907 aa		10.38	□□□□□ -0.75
TCF7-223	ENST00000522653	OMA1	Q96E52	524 aa		10.38	□□□□□ -0.75
TCF7-223	ENST00000522653	PPP1R10	Q96QC0	940 aa	Known RBP	10.38	□□□□□ -0.75
TCF7-223	ENST00000522653	DUSP16	Q9BY84	665 aa		10.38	□□□□□ -0.75
TCF7-223	ENST00000522653	MRPS26	Q9BYN8	205 aa	Known RBP	10.38	□□□□□ -0.75
TCF7-223	ENST00000522653	RNPEP	Q9H4A4	650 aa		10.38	□□□□□ -0.75
TCF7-223	ENST00000522653	TIMMDC1	Q9NPL8	285 aa		10.38	□□□□□ -0.75
TCF7-223	ENST00000522653	MORF4L1	Q9UBU8	362 aa		10.38	□□□□□ -0.75
TCF7-223	ENST00000522653	MYRF	Q9Y2G1	1151 aa		10.38	□□□□□ -0.75
TCF7-223	ENST00000522653	PCDHB1	Q9Y5F3	818 aa		10.38	□□□□□ -0.75
TCF7-223	ENST00000522653		A0A1B0GVM2	712 aa		10.37	□□□□□ -0.75
TCF7-223	ENST00000522653	TCAF2	A6NFQ2	919 aa		10.37	□□□□□ -0.75
TCF7-223	ENST00000522653	FCHO1	O14526	889 aa		10.37	□□□□□ -0.75
TCF7-223	ENST00000522653	YKT6	O15498	198 aa		10.37	□□□□□ -0.75
TCF7-223	ENST00000522653	PLG	P00747	810 aa	Predicted RBP	10.37	□□□□□ -0.75
TCF7-223	ENST00000522653	LPO	P22079	712 aa	Predicted RBP	10.37	□□□□□ -0.75
TCF7-223	ENST00000522653	NDUFA5	Q16718	116 aa		10.37	□□□□□ -0.75
TCF7-223	ENST00000522653	ZNF800	Q2TB10	664 aa	Predicted RBP eCLIP	10.37	□□□□□ -0.75
TCF7-223	ENST00000522653	ZFP1	Q6P2D0	407 aa		10.37	□□□□□ -0.75
TCF7-223	ENST00000522653	NET1	Q7Z628	596 aa	Predicted RBP	10.37	□□□□□ -0.75
TCF7-223	ENST00000522653	FAM35A	Q86V20	835 aa		10.37	□□□□□ -0.75
TCF7-223	ENST00000522653	RNASE11	Q8TAA1	199 aa	Known RBP	10.37	□□□□□ -0.75
TCF7-223	ENST00000522653	AGR3	Q8TD06	166 aa		10.37	□□□□□ -0.75
TCF7-223	ENST00000522653	TRAPPC12	Q8WVT3	735 aa		10.37	□□□□□ -0.75
TCF7-223	ENST00000522653	CLIP3	Q96DZ5	547 aa		10.37	□□□□□ -0.75
TCF7-223	ENST00000522653	CNDP1	Q96KN2	507 aa		10.37	□□□□□ -0.75
TCF7-223	ENST00000522653	FBXL18	Q96ME1	805 aa		10.37	□□□□□ -0.75
TCF7-223	ENST00000522653	GTF2IRD1	Q9UHL9	959 aa		10.37	□□□□□ -0.75
TCF7-223	ENST00000522653	ASF1A	Q9Y294	204 aa		10.37	□□□□□ -0.75
TCF7-223	ENST00000522653	SPIN1	Q9Y657	262 aa	Predicted RBP	10.37	□□□□□ -0.75
TCF7-223	ENST00000522653	C15orf38-AP3S2	A0A0A6YYH1	394 aa		10.37	□□□□□ -0.75
TCF7-223	ENST00000522653	MCIDAS	D6RGH6	385 aa		10.37	□□□□□ -0.75
TCF7-223	ENST00000522653	VAV1	P15498	845 aa		10.37	□□□□□ -0.75
TCF7-223	ENST00000522653	PGAM1	P18669	254 aa		10.37	□□□□□ -0.75
TCF7-223	ENST00000522653	CCKBR	P32239	447 aa		10.37	□□□□□ -0.75
TCF7-223	ENST00000522653	RAP1GAP	P47736	663 aa		10.37	□□□□□ -0.75
TCF7-223	ENST00000522653	DUSP4	Q13115	394 aa		10.37	□□□□□ -0.75
TCF7-223	ENST00000522653	NCF4	Q15080	339 aa		10.37	□□□□□ -0.75
TCF7-223	ENST00000522653	PGS1	Q32NB8	556 aa		10.37	□□□□□ -0.75
TCF7-223	ENST00000522653	ARPIN	Q7Z6K5	226 aa		10.37	□□□□□ -0.75
TCF7-223	ENST00000522653	CLVS1	Q8IUQ0	354 aa	Predicted RBP	10.37	□□□□□ -0.75
TCF7-223	ENST00000522653	ZFPM1	Q8IX07	1006 aa		10.37	□□□□□ -0.75
TCF7-223	ENST00000522653	GPR156	Q8NFN8	814 aa		10.37	□□□□□ -0.75
TCF7-223	ENST00000522653	TTL	Q8NG68	377 aa		10.37	□□□□□ -0.75
TCF7-223	ENST00000522653	BRI3BP	Q8WY22	251 aa		10.37	□□□□□ -0.75
TCF7-223	ENST00000522653	DGCR14	Q96DF8	476 aa	Known RBP	10.37	□□□□□ -0.75
TCF7-223	ENST00000522653	ZNF717	Q9BY31	904 aa	Predicted RBP	10.37	□□□□□ -0.75
TCF7-223	ENST00000522653	SLC29A3	Q9BZD2	475 aa		10.37	□□□□□ -0.75
TCF7-223	ENST00000522653	GRIP2	Q9C0E4	1043 aa		10.37	□□□□□ -0.75
TCF7-223	ENST00000522653	HECA	Q9UBI9	543 aa	Predicted RBP	10.37	□□□□□ -0.75
TCF7-223	ENST00000522653		A0A1W2PQ45	241 aa	Predicted RBP	10.37	□□□□□ -0.75
TCF7-223	ENST00000522653		A0A1W2PQY0	241 aa		10.37	□□□□□ -0.75
TCF7-223	ENST00000522653	SMNDC1	O75940	238 aa	Known RBP eCLIP	10.37	□□□□□ -0.75
TCF7-223	ENST00000522653	TTK	P33981	857 aa		10.37	□□□□□ -0.75
TCF7-223	ENST00000522653	SEC13	P55735	322 aa		10.37	□□□□□ -0.75
TCF7-223	ENST00000522653	GJA9	P57773	515 aa		10.37	□□□□□ -0.75
TCF7-223	ENST00000522653	RGS21	Q2M5E4	152 aa		10.37	□□□□□ -0.75
TCF7-223	ENST00000522653	TXNDC11	Q6PKC3	985 aa		10.37	□□□□□ -0.75
TCF7-223	ENST00000522653	DEPDC4	Q8N2C3	294 aa		10.37	□□□□□ -0.75
TCF7-223	ENST00000522653	OR10H5	Q8NGA6	315 aa		10.37	□□□□□ -0.75
TCF7-223	ENST00000522653	OR52L1	Q8NGH7	329 aa		10.37	□□□□□ -0.75
TCF7-223	ENST00000522653	ZNF398	Q8TD17	642 aa		10.37	□□□□□ -0.75
TCF7-223	ENST00000522653	KLHL6	Q8WZ60	621 aa		10.37	□□□□□ -0.75
TCF7-223	ENST00000522653	OXNAD1	Q96HP4	312 aa	Predicted RBP	10.37	□□□□□ -0.75
TCF7-223	ENST00000522653	B4GALT7	Q9UBV7	327 aa		10.37	□□□□□ -0.75
TCF7-223	ENST00000522653	DMTF1	Q9Y222	760 aa		10.37	□□□□□ -0.75
TCF7-223	ENST00000522653	FAM237A	A0A1B0GTK4	181 aa		10.37	□□□□□ -0.75
TCF7-223	ENST00000522653	ATP6V1G1	O75348	118 aa		10.37	□□□□□ -0.75
TCF7-223	ENST00000522653	CCDC166	P0CW27	439 aa		10.37	□□□□□ -0.75
TCF7-223	ENST00000522653	PFKL	P17858	780 aa		10.37	□□□□□ -0.75
TCF7-223	ENST00000522653	TCN1	P20061	433 aa	Predicted RBP	10.37	□□□□□ -0.75
TCF7-223	ENST00000522653	PPIB	P23284	216 aa	Known RBP	10.37	□□□□□ -0.75
TCF7-223	ENST00000522653	NR1H2	P55055	460 aa		10.37	□□□□□ -0.75
TCF7-223	ENST00000522653	CBX3	Q13185	183 aa		10.37	□□□□□ -0.75
TCF7-223	ENST00000522653	LDLRAP1	Q5SW96	308 aa		10.37	□□□□□ -0.75
TCF7-223	ENST00000522653	PEG10	Q86TG7	708 aa	Known RBP	10.37	□□□□□ -0.75
TCF7-223	ENST00000522653	ADAMTSL2	Q86TH1	951 aa		10.37	□□□□□ -0.75
TCF7-223	ENST00000522653	ARL10	Q8N8L6	244 aa		10.37	□□□□□ -0.75

Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms