RNA–Protein interactions for RNA: ENST00000522243.5

SDCBP-209, Transcript of syndecan binding protein, humanhuman

TSL 5

Gene SDCBP, Length 556 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-209ENST00000522243 XPO4Q9C0E2 1151 aaKnown RBP20.81■□□□□ 0.92
SDCBP-209ENST00000522243 SCUBE2Q9NQ36 999 aa20.81■□□□□ 0.92
SDCBP-209ENST00000522243 DOLKQ9UPQ8 538 aa20.81■□□□□ 0.92
SDCBP-209ENST00000522243 PCDHGC4Q9Y5F7 938 aa20.81■□□□□ 0.92
SDCBP-209ENST00000522243 DMXL2Q8TDJ6 3036 aa20.8■□□□□ 0.92
SDCBP-209ENST00000522243 APC2O95996 2303 aa20.8■□□□□ 0.92
SDCBP-209ENST00000522243 A0A087WV48 116 aa20.8■□□□□ 0.92
SDCBP-209ENST00000522243 EME2A4GXA9 379 aaPredicted RBP20.8■□□□□ 0.92
SDCBP-209ENST00000522243 TMEM110-MUSTN1A8MSY1 372 aa20.8■□□□□ 0.92
SDCBP-209ENST00000522243 LMO7DNF2Z398 122 aa20.8■□□□□ 0.92
SDCBP-209ENST00000522243 MYO1FO00160 1098 aa20.8■□□□□ 0.92
SDCBP-209ENST00000522243 MAFKO60675 156 aa20.8■□□□□ 0.92
SDCBP-209ENST00000522243 CSO75390 466 aaKnown RBP20.8■□□□□ 0.92
SDCBP-209ENST00000522243 CD48P09326 243 aa20.8■□□□□ 0.92
SDCBP-209ENST00000522243 ELFN1P0C7U0 828 aa20.8■□□□□ 0.92
SDCBP-209ENST00000522243 ITPKBP27987 946 aa20.8■□□□□ 0.92
SDCBP-209ENST00000522243 HTR1BP28222 390 aa20.8■□□□□ 0.92
SDCBP-209ENST00000522243 BLKP51451 505 aa20.8■□□□□ 0.92
SDCBP-209ENST00000522243 HK3P52790 923 aa20.8■□□□□ 0.92
SDCBP-209ENST00000522243 POLR2LP62875 67 aaKnown RBP20.8■□□□□ 0.92
SDCBP-209ENST00000522243 MTM1Q13496 603 aa20.8■□□□□ 0.92
SDCBP-209ENST00000522243 AGERQ15109 404 aa20.8■□□□□ 0.92
SDCBP-209ENST00000522243 ATP13A4Q4VNC1 1196 aa20.8■□□□□ 0.92
SDCBP-209ENST00000522243 C6orf132Q5T0Z8 1188 aa20.8■□□□□ 0.92
SDCBP-209ENST00000522243 KCTD16Q68DU8 428 aa20.8■□□□□ 0.92
SDCBP-209ENST00000522243 DPPA4Q7L190 304 aa20.8■□□□□ 0.92
SDCBP-209ENST00000522243 ZNF564Q8TBZ8 553 aaPredicted RBP20.8■□□□□ 0.92
SDCBP-209ENST00000522243 KLQ9UEF7 1012 aa20.8■□□□□ 0.92
SDCBP-209ENST00000522243 PKD1L2Q7Z442 2459 aa20.8■□□□□ 0.92
SDCBP-209ENST00000522243 ACACAQ13085 2346 aa20.79■□□□□ 0.92
SDCBP-209ENST00000522243 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP20.79■□□□□ 0.92
SDCBP-209ENST00000522243 CFAP69A5D8W1 941 aa20.79■□□□□ 0.92
SDCBP-209ENST00000522243 CASC3O15234 703 aaKnown RBP20.79■□□□□ 0.92
SDCBP-209ENST00000522243 USP12O75317 370 aa20.79■□□□□ 0.92
SDCBP-209ENST00000522243 RASGRP1O95267 797 aa20.79■□□□□ 0.92
SDCBP-209ENST00000522243 GM2AP17900 193 aa20.79■□□□□ 0.92
SDCBP-209ENST00000522243 CR2P20023 1033 aa20.79■□□□□ 0.92
SDCBP-209ENST00000522243 IL4RP24394 825 aa20.79■□□□□ 0.92
SDCBP-209ENST00000522243 SRP54P61011 504 aaKnown RBP20.79■□□□□ 0.92
SDCBP-209ENST00000522243 ACOX1Q15067 660 aa20.79■□□□□ 0.92
SDCBP-209ENST00000522243 TBATAQ96M53 351 aa20.79■□□□□ 0.92
SDCBP-209ENST00000522243 WDR92Q96MX6 357 aa20.79■□□□□ 0.92
SDCBP-209ENST00000522243 NUDCD1Q96RS6 583 aa20.79■□□□□ 0.92
SDCBP-209ENST00000522243 NOD2Q9HC29 1040 aa20.79■□□□□ 0.92
SDCBP-209ENST00000522243 NCKIPSDQ9NZQ3 722 aa20.79■□□□□ 0.92
SDCBP-209ENST00000522243 SIRPGQ9P1W8 387 aa20.79■□□□□ 0.92
SDCBP-209ENST00000522243 GULP1Q9UBP9 304 aa20.79■□□□□ 0.92
SDCBP-209ENST00000522243 B4GALT6Q9UBX8 382 aa20.79■□□□□ 0.92
SDCBP-209ENST00000522243 COL27A1Q8IZC6 1860 aaPredicted RBP20.79■□□□□ 0.92
SDCBP-209ENST00000522243 ASXL3Q9C0F0 2248 aa20.78■□□□□ 0.92
SDCBP-209ENST00000522243 ZZEF1O43149 2961 aa20.78■□□□□ 0.92
SDCBP-209ENST00000522243 MPOP05164 745 aa20.78■□□□□ 0.92
SDCBP-209ENST00000522243 SERPINB6P35237 376 aa20.78■□□□□ 0.92
SDCBP-209ENST00000522243 EIF2S3P41091 472 aaKnown RBP20.78■□□□□ 0.92
SDCBP-209ENST00000522243 ABCG1P45844 678 aa20.78■□□□□ 0.92
SDCBP-209ENST00000522243 HADHQ16836 314 aaKnown RBP20.78■□□□□ 0.92
SDCBP-209ENST00000522243 DENND2CQ68D51 928 aa20.78■□□□□ 0.92
SDCBP-209ENST00000522243 BBS5Q8N3I7 341 aa20.78■□□□□ 0.92
SDCBP-209ENST00000522243 FSTL5Q8N475 847 aaPredicted RBP20.78■□□□□ 0.92
SDCBP-209ENST00000522243 PCDH19Q8TAB3 1148 aa20.78■□□□□ 0.92
SDCBP-209ENST00000522243 NSMCE1Q8WV22 266 aa20.78■□□□□ 0.92
SDCBP-209ENST00000522243 GLMNQ92990 594 aa20.78■□□□□ 0.92
SDCBP-209ENST00000522243 FUBP1Q96AE4 644 aaKnown RBP20.78■□□□□ 0.92
SDCBP-209ENST00000522243 MGME1Q9BQP7 344 aa20.78■□□□□ 0.92
SDCBP-209ENST00000522243 PACSIN1Q9BY11 444 aa20.78■□□□□ 0.92
SDCBP-209ENST00000522243 CTTNBP2NLQ9P2B4 639 aa20.78■□□□□ 0.92
SDCBP-209ENST00000522243 NENFQ9UMX5 172 aa20.78■□□□□ 0.92
SDCBP-209ENST00000522243 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP20.78■□□□□ 0.92
SDCBP-209ENST00000522243 HTRA2O43464 458 aaPredicted RBP20.77■□□□□ 0.92
SDCBP-209ENST00000522243 MAP3K6O95382 1288 aa20.77■□□□□ 0.92
SDCBP-209ENST00000522243 CPP00450 1065 aa20.77■□□□□ 0.92
SDCBP-209ENST00000522243 TNFP01375 233 aa20.77■□□□□ 0.92
SDCBP-209ENST00000522243 HSPA9P38646 679 aaKnown RBP20.77■□□□□ 0.92
SDCBP-209ENST00000522243 MMP13P45452 471 aa20.77■□□□□ 0.92
SDCBP-209ENST00000522243 RPIAP49247 311 aa20.77■□□□□ 0.92
SDCBP-209ENST00000522243 GABREP78334 506 aa20.77■□□□□ 0.92
SDCBP-209ENST00000522243 TRAF2Q12933 501 aa20.77■□□□□ 0.92
SDCBP-209ENST00000522243 PTPRRQ15256 657 aa20.77■□□□□ 0.92
SDCBP-209ENST00000522243 ELOCQ15369 112 aa20.77■□□□□ 0.92
SDCBP-209ENST00000522243 MARC1Q5VT66 337 aa20.77■□□□□ 0.92
SDCBP-209ENST00000522243 ESRP1Q6NXG1 681 aaKnown RBP20.77■□□□□ 0.92
SDCBP-209ENST00000522243 LRRC69Q6ZNQ3 347 aa20.77■□□□□ 0.92
SDCBP-209ENST00000522243 PELI3Q8N2H9 469 aa20.77■□□□□ 0.92
SDCBP-209ENST00000522243 FGF11Q92914 225 aa20.77■□□□□ 0.92
SDCBP-209ENST00000522243 PDXPQ96GD0 296 aa20.77■□□□□ 0.92
SDCBP-209ENST00000522243 SYNDIG1Q9H7V2 258 aa20.77■□□□□ 0.92
SDCBP-209ENST00000522243 NT5MQ9NPB1 228 aa20.77■□□□□ 0.92
SDCBP-209ENST00000522243 MRPL40Q9NQ50 206 aaKnown RBP20.77■□□□□ 0.92
SDCBP-209ENST00000522243 PADI4Q9UM07 663 aa20.77■□□□□ 0.92
SDCBP-209ENST00000522243 RP1P56715 2156 aa20.76■□□□□ 0.91
SDCBP-209ENST00000522243 FREM2Q5SZK8 3169 aa20.76■□□□□ 0.91
SDCBP-209ENST00000522243 TMEM202A6NGA9 273 aa20.76■□□□□ 0.91
SDCBP-209ENST00000522243 CACNB4O00305 520 aaPredicted RBP20.76■□□□□ 0.91
SDCBP-209ENST00000522243 MFSD11O43934 449 aa20.76■□□□□ 0.91
SDCBP-209ENST00000522243 SOCS5O75159 536 aa20.76■□□□□ 0.91
SDCBP-209ENST00000522243 ALPIP09923 528 aa20.76■□□□□ 0.91
SDCBP-209ENST00000522243 PTMSP20962 102 aa20.76■□□□□ 0.91
SDCBP-209ENST00000522243 ACTN2P35609 894 aa20.76■□□□□ 0.91
SDCBP-209ENST00000522243 ARSEP51690 589 aa20.76■□□□□ 0.91
SDCBP-209ENST00000522243 TAS2R40P59535 323 aa20.76■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms