RNA–Protein interactions for RNA: ENST00000521545.6

LAPTM4B-203, Transcript of lysosomal protein transmembrane 4 beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LAPTM4B, Length 915 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAPTM4B-203ENST00000521545 GUSBP11Q6P575 273 aa26.07■■□□□ 1.76
LAPTM4B-203ENST00000521545 RD3Q7Z3Z2 195 aa26.07■■□□□ 1.76
LAPTM4B-203ENST00000521545 ATPAF2Q8N5M1 289 aa26.07■■□□□ 1.76
LAPTM4B-203ENST00000521545 TSACCQ96A04 125 aaPredicted RBP26.07■■□□□ 1.76
LAPTM4B-203ENST00000521545 BOCQ9BWV1 1114 aa26.07■■□□□ 1.76
LAPTM4B-203ENST00000521545 PCDH18Q9HCL0 1135 aa26.07■■□□□ 1.76
LAPTM4B-203ENST00000521545 OR1A2Q9Y585 309 aa26.07■■□□□ 1.76
LAPTM4B-203ENST00000521545 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP26.07■■□□□ 1.76
LAPTM4B-203ENST00000521545 ITPR1Q14643 2758 aa26.07■■□□□ 1.76
LAPTM4B-203ENST00000521545 LAMA5O15230 3695 aa26.07■■□□□ 1.76
LAPTM4B-203ENST00000521545 NBEAQ8NFP9 2946 aa26.06■■□□□ 1.76
LAPTM4B-203ENST00000521545 A0A1W2PQ67 120 aa26.06■■□□□ 1.76
LAPTM4B-203ENST00000521545 TRAFD1O14545 582 aaPredicted RBP26.06■■□□□ 1.76
LAPTM4B-203ENST00000521545 YY2O15391 372 aa26.06■■□□□ 1.76
LAPTM4B-203ENST00000521545 RRP8O43159 456 aaKnown RBP26.06■■□□□ 1.76
LAPTM4B-203ENST00000521545 BRINP1O60477 761 aa26.06■■□□□ 1.76
LAPTM4B-203ENST00000521545 RECQL5O94762 991 aaPredicted RBP26.06■■□□□ 1.76
LAPTM4B-203ENST00000521545 ALPIP09923 528 aa26.06■■□□□ 1.76
LAPTM4B-203ENST00000521545 TXNRD3NBQ6F5E7 133 aa26.06■■□□□ 1.76
LAPTM4B-203ENST00000521545 LIPIQ6XZB0 460 aa26.06■■□□□ 1.76
LAPTM4B-203ENST00000521545 DPPA4Q7L190 304 aa26.06■■□□□ 1.76
LAPTM4B-203ENST00000521545 FGF11Q92914 225 aa26.06■■□□□ 1.76
LAPTM4B-203ENST00000521545 WDR92Q96MX6 357 aa26.06■■□□□ 1.76
LAPTM4B-203ENST00000521545 CLPBQ9H078 707 aa26.06■■□□□ 1.76
LAPTM4B-203ENST00000521545 KLQ9UEF7 1012 aa26.06■■□□□ 1.76
LAPTM4B-203ENST00000521545 PCDHB1Q9Y5F3 818 aa26.06■■□□□ 1.76
LAPTM4B-203ENST00000521545 CSO75390 466 aaKnown RBP26.05■■□□□ 1.76
LAPTM4B-203ENST00000521545 GYPCP04921 128 aa26.05■■□□□ 1.76
LAPTM4B-203ENST00000521545 NFKBIAP25963 317 aa26.05■■□□□ 1.76
LAPTM4B-203ENST00000521545 CASP14P31944 242 aa26.05■■□□□ 1.76
LAPTM4B-203ENST00000521545 ABCG1P45844 678 aa26.05■■□□□ 1.76
LAPTM4B-203ENST00000521545 CDH6P55285 790 aa26.05■■□□□ 1.76
LAPTM4B-203ENST00000521545 SRP54P61011 504 aaKnown RBP26.05■■□□□ 1.76
LAPTM4B-203ENST00000521545 SLC25A11Q02978 314 aaKnown RBP26.05■■□□□ 1.76
LAPTM4B-203ENST00000521545 ALG11Q2TAA5 492 aa26.05■■□□□ 1.76
LAPTM4B-203ENST00000521545 LVRNQ6Q4G3 990 aa26.05■■□□□ 1.76
LAPTM4B-203ENST00000521545 SLC35F3Q8IY50 421 aa26.05■■□□□ 1.76
LAPTM4B-203ENST00000521545 SDR16C5Q8N3Y7 309 aa26.05■■□□□ 1.76
LAPTM4B-203ENST00000521545 PDCD6IPQ8WUM4 868 aaKnown RBP26.05■■□□□ 1.76
LAPTM4B-203ENST00000521545 NAT6Q93015 286 aa26.05■■□□□ 1.76
LAPTM4B-203ENST00000521545 NUDCD1Q96RS6 583 aa26.05■■□□□ 1.76
LAPTM4B-203ENST00000521545 LRRK1Q38SD2 2015 aa26.05■■□□□ 1.76
LAPTM4B-203ENST00000521545 ANKRD36A6QL64 1941 aa26.04■■□□□ 1.76
LAPTM4B-203ENST00000521545 A8MX80 341 aa26.04■■□□□ 1.76
LAPTM4B-203ENST00000521545 CACNB4O00305 520 aaPredicted RBP26.04■■□□□ 1.76
LAPTM4B-203ENST00000521545 TLX3O43711 291 aaPredicted RBP26.04■■□□□ 1.76
LAPTM4B-203ENST00000521545 MAFKO60675 156 aa26.04■■□□□ 1.76
LAPTM4B-203ENST00000521545 USP12O75317 370 aa26.04■■□□□ 1.76
LAPTM4B-203ENST00000521545 TNFP01375 233 aa26.04■■□□□ 1.76
LAPTM4B-203ENST00000521545 EIF2S3P41091 472 aaKnown RBP26.04■■□□□ 1.76
LAPTM4B-203ENST00000521545 RALGDSQ12967 914 aa26.04■■□□□ 1.76
LAPTM4B-203ENST00000521545 MARC1Q5VT66 337 aa26.04■■□□□ 1.76
LAPTM4B-203ENST00000521545 GKN2Q86XP6 184 aa26.04■■□□□ 1.76
LAPTM4B-203ENST00000521545 LRRC49Q8IUZ0 686 aa26.04■■□□□ 1.76
LAPTM4B-203ENST00000521545 RCOR3Q9P2K3 495 aaPredicted RBP26.04■■□□□ 1.76
LAPTM4B-203ENST00000521545 GULP1Q9UBP9 304 aa26.04■■□□□ 1.76
LAPTM4B-203ENST00000521545 PADI4Q9UM07 663 aa26.04■■□□□ 1.76
LAPTM4B-203ENST00000521545 PCDHGC4Q9Y5F7 938 aa26.04■■□□□ 1.76
LAPTM4B-203ENST00000521545 TTC24A2A3L6 582 aaPredicted RBP26.03■■□□□ 1.76
LAPTM4B-203ENST00000521545 SOCS5O75159 536 aa26.03■■□□□ 1.76
LAPTM4B-203ENST00000521545 PEX11BO96011 259 aa26.03■■□□□ 1.76
LAPTM4B-203ENST00000521545 TGM2P21980 687 aa26.03■■□□□ 1.76
LAPTM4B-203ENST00000521545 ACOX1Q15067 660 aa26.03■■□□□ 1.76
LAPTM4B-203ENST00000521545 ZSCAN23Q3MJ62 389 aa26.03■■□□□ 1.76
LAPTM4B-203ENST00000521545 LSMEM2Q8N112 164 aa26.03■■□□□ 1.76
LAPTM4B-203ENST00000521545 PLA2G15Q8NCC3 412 aa26.03■■□□□ 1.76
LAPTM4B-203ENST00000521545 SNIP1Q8TAD8 396 aaKnown RBP26.03■■□□□ 1.76
LAPTM4B-203ENST00000521545 ZNF564Q8TBZ8 553 aaPredicted RBP26.03■■□□□ 1.76
LAPTM4B-203ENST00000521545 NSMCE3Q96MG7 304 aa26.03■■□□□ 1.76
LAPTM4B-203ENST00000521545 B4GALT6Q9UBX8 382 aa26.03■■□□□ 1.76
LAPTM4B-203ENST00000521545 HTRA2O43464 458 aaPredicted RBP26.02■■□□□ 1.76
LAPTM4B-203ENST00000521545 CPP00450 1065 aa26.02■■□□□ 1.76
LAPTM4B-203ENST00000521545 KELP23276 732 aa26.02■■□□□ 1.76
LAPTM4B-203ENST00000521545 MMP13P45452 471 aa26.02■■□□□ 1.76
LAPTM4B-203ENST00000521545 RALGPS1Q5JS13 557 aa26.02■■□□□ 1.76
LAPTM4B-203ENST00000521545 PGBD5Q8N414 524 aa26.02■■□□□ 1.76
LAPTM4B-203ENST00000521545 WDR48Q8TAF3 677 aa26.02■■□□□ 1.76
LAPTM4B-203ENST00000521545 SPOCK2Q92563 424 aa26.02■■□□□ 1.76
LAPTM4B-203ENST00000521545 GRAMD1AQ96CP6 724 aa26.02■■□□□ 1.76
LAPTM4B-203ENST00000521545 MGME1Q9BQP7 344 aa26.02■■□□□ 1.76
LAPTM4B-203ENST00000521545 XPO4Q9C0E2 1151 aaKnown RBP26.02■■□□□ 1.76
LAPTM4B-203ENST00000521545 NOD2Q9HC29 1040 aa26.02■■□□□ 1.76
LAPTM4B-203ENST00000521545 CTTNBP2NLQ9P2B4 639 aa26.02■■□□□ 1.76
LAPTM4B-203ENST00000521545 CACNA1GO43497 2377 aa26.02■■□□□ 1.76
LAPTM4B-203ENST00000521545 CELA2BP08218 269 aaPredicted RBP26.01■■□□□ 1.75
LAPTM4B-203ENST00000521545 CR2P20023 1033 aa26.01■■□□□ 1.75
LAPTM4B-203ENST00000521545 KIAA1024LP59773 190 aa26.01■■□□□ 1.75
LAPTM4B-203ENST00000521545 GABREP78334 506 aa26.01■■□□□ 1.75
LAPTM4B-203ENST00000521545 TCEA2Q15560 299 aa26.01■■□□□ 1.75
LAPTM4B-203ENST00000521545 ISXQ2M1V0 245 aa26.01■■□□□ 1.75
LAPTM4B-203ENST00000521545 TBC1D25Q3MII6 688 aa26.01■■□□□ 1.75
LAPTM4B-203ENST00000521545 PERM1Q5SV97 790 aa26.01■■□□□ 1.75
LAPTM4B-203ENST00000521545 CRTC1Q6UUV9 634 aa26.01■■□□□ 1.75
LAPTM4B-203ENST00000521545 RBM44Q6ZP01 1051 aaKnown RBP26.01■■□□□ 1.75
LAPTM4B-203ENST00000521545 KCTD6Q8NC69 237 aa26.01■■□□□ 1.75
LAPTM4B-203ENST00000521545 KCTD5Q9NXV2 234 aa26.01■■□□□ 1.75
LAPTM4B-203ENST00000521545 SIRPGQ9P1W8 387 aa26.01■■□□□ 1.75
LAPTM4B-203ENST00000521545 PHTF1Q9UMS5 762 aa26.01■■□□□ 1.75
LAPTM4B-203ENST00000521545 GPR34Q9UPC5 381 aa26.01■■□□□ 1.75
LAPTM4B-203ENST00000521545 CELSR3Q9NYQ7 3312 aa26.01■■□□□ 1.75
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms