RNA–Protein interactions for RNA: ENST00000520946.1

MRPS28-206, Transcript of mitochondrial ribosomal protein S28, humanhuman

TSL 5

Gene MRPS28, Length 411 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS28-206ENST00000520946 NDST4Q9H3R1 872 aa11.57□□□□□ -0.56
MRPS28-206ENST00000520946 SIX2Q9NPC8 291 aa11.57□□□□□ -0.56
MRPS28-206ENST00000520946 AJAP1Q9UKB5 411 aaPredicted RBP11.57□□□□□ -0.56
MRPS28-206ENST00000520946 ATP8A1Q9Y2Q0 1164 aa11.57□□□□□ -0.56
MRPS28-206ENST00000520946 HECTD1Q9ULT8 2610 aa11.56□□□□□ -0.56
MRPS28-206ENST00000520946 DOCK4Q8N1I0 1966 aa11.56□□□□□ -0.56
MRPS28-206ENST00000520946 GOLGA6CA6NDK9 693 aa11.56□□□□□ -0.56
MRPS28-206ENST00000520946 GOLGA6BA6NDN3 693 aa11.56□□□□□ -0.56
MRPS28-206ENST00000520946 RASA4BC9J798 803 aa11.56□□□□□ -0.56
MRPS28-206ENST00000520946 FAM72CH0Y354 149 aa11.56□□□□□ -0.56
MRPS28-206ENST00000520946 TNFRSF10CO14798 259 aa11.56□□□□□ -0.56
MRPS28-206ENST00000520946 HGSO14964 777 aaPredicted RBP11.56□□□□□ -0.56
MRPS28-206ENST00000520946 INSIG1O15503 277 aa11.56□□□□□ -0.56
MRPS28-206ENST00000520946 RASA4O43374 803 aa11.56□□□□□ -0.56
MRPS28-206ENST00000520946 MMEP08473 750 aa11.56□□□□□ -0.56
MRPS28-206ENST00000520946 GOLGA6DP0CG33 693 aa11.56□□□□□ -0.56
MRPS28-206ENST00000520946 KRT3P12035 628 aa11.56□□□□□ -0.56
MRPS28-206ENST00000520946 POLE2P56282 527 aa11.56□□□□□ -0.56
MRPS28-206ENST00000520946 OR1D5P58170 312 aa11.56□□□□□ -0.56
MRPS28-206ENST00000520946 KIAA1024LP59773 190 aa11.56□□□□□ -0.56
MRPS28-206ENST00000520946 BECN1Q14457 450 aa11.56□□□□□ -0.56
MRPS28-206ENST00000520946 CLCA4Q14CN2 919 aa11.56□□□□□ -0.56
MRPS28-206ENST00000520946 NCAPHQ15003 741 aa11.56□□□□□ -0.56
MRPS28-206ENST00000520946 SYCP1Q15431 976 aa11.56□□□□□ -0.56
MRPS28-206ENST00000520946 SKIDA1Q1XH10 827 aa11.56□□□□□ -0.56
MRPS28-206ENST00000520946 PARP15Q460N3 678 aa11.56□□□□□ -0.56
MRPS28-206ENST00000520946 CCDC14Q49A88 953 aa11.56□□□□□ -0.56
MRPS28-206ENST00000520946 VWA3BQ502W6 1294 aa11.56□□□□□ -0.56
MRPS28-206ENST00000520946 FAM72AQ5TYM5 149 aa11.56□□□□□ -0.56
MRPS28-206ENST00000520946 FAM72DQ6L9T8 149 aa11.56□□□□□ -0.56
MRPS28-206ENST00000520946 TRNP1Q6NT89 227 aa11.56□□□□□ -0.56
MRPS28-206ENST00000520946 OGFOD3Q6PK18 319 aa11.56□□□□□ -0.56
MRPS28-206ENST00000520946 STRADAQ7RTN6 431 aa11.56□□□□□ -0.56
MRPS28-206ENST00000520946 FAM72BQ86X60 149 aa11.56□□□□□ -0.56
MRPS28-206ENST00000520946 RTL3Q8N8U3 475 aaKnown RBP11.56□□□□□ -0.56
MRPS28-206ENST00000520946 RCBTB1Q8NDN9 531 aa11.56□□□□□ -0.56
MRPS28-206ENST00000520946 GPT2Q8TD30 523 aa11.56□□□□□ -0.56
MRPS28-206ENST00000520946 ZDHHC1Q8WTX9 485 aa11.56□□□□□ -0.56
MRPS28-206ENST00000520946 AHCYL2Q96HN2 611 aaKnown RBP11.56□□□□□ -0.56
MRPS28-206ENST00000520946 CATSPER2Q96P56 530 aa11.56□□□□□ -0.56
MRPS28-206ENST00000520946 TUBGCP5Q96RT8 1024 aa11.56□□□□□ -0.56
MRPS28-206ENST00000520946 WDR26Q9H7D7 661 aa11.56□□□□□ -0.56
MRPS28-206ENST00000520946 ATP13A3Q9H7F0 1226 aa11.56□□□□□ -0.56
MRPS28-206ENST00000520946 CARS2Q9HA77 564 aaKnown RBP11.56□□□□□ -0.56
MRPS28-206ENST00000520946 MRPL40Q9NQ50 206 aaKnown RBP11.56□□□□□ -0.56
MRPS28-206ENST00000520946 GOLGA6AQ9NYA3 693 aa11.56□□□□□ -0.56
MRPS28-206ENST00000520946 CHD5Q8TDI0 1954 aa11.56□□□□□ -0.56
MRPS28-206ENST00000520946 ATMQ13315 3056 aa11.55□□□□□ -0.56
MRPS28-206ENST00000520946 TMEM202A6NGA9 273 aa11.55□□□□□ -0.56
MRPS28-206ENST00000520946 ZNF891A8MT65 544 aaPredicted RBP11.55□□□□□ -0.56
MRPS28-206ENST00000520946 PALMO75781 387 aa11.55□□□□□ -0.56
MRPS28-206ENST00000520946 RECQL5O94762 991 aaPredicted RBP11.55□□□□□ -0.56
MRPS28-206ENST00000520946 PRKCGP05129 697 aa11.55□□□□□ -0.56
MRPS28-206ENST00000520946 CCL4P13236 92 aa11.55□□□□□ -0.56
MRPS28-206ENST00000520946 NFKBIAP25963 317 aa11.55□□□□□ -0.56
MRPS28-206ENST00000520946 MAN1A1P33908 653 aa11.55□□□□□ -0.56
MRPS28-206ENST00000520946 STAT1P42224 750 aa11.55□□□□□ -0.56
MRPS28-206ENST00000520946 PTPN9P43378 593 aa11.55□□□□□ -0.56
MRPS28-206ENST00000520946 MAZP56270 477 aaKnown RBP11.55□□□□□ -0.56
MRPS28-206ENST00000520946 NOMO3P69849 1222 aa11.55□□□□□ -0.56
MRPS28-206ENST00000520946 BCL2L1Q07817 233 aa11.55□□□□□ -0.56
MRPS28-206ENST00000520946 SERINC3Q13530 473 aa11.55□□□□□ -0.56
MRPS28-206ENST00000520946 SEPT6Q14141 434 aa11.55□□□□□ -0.56
MRPS28-206ENST00000520946 HLTFQ14527 1009 aaKnown RBP eCLIP11.55□□□□□ -0.56
MRPS28-206ENST00000520946 C16orf72Q14CZ0 275 aa11.55□□□□□ -0.56
MRPS28-206ENST00000520946 CAMK4Q16566 473 aa11.55□□□□□ -0.56
MRPS28-206ENST00000520946 CLPPQ16740 277 aaPredicted RBP11.55□□□□□ -0.56
MRPS28-206ENST00000520946 MANEALQ5VSG8 457 aa11.55□□□□□ -0.56
MRPS28-206ENST00000520946 NOP9Q86U38 636 aaKnown RBP11.55□□□□□ -0.56
MRPS28-206ENST00000520946 FAM129CQ86XR2 697 aa11.55□□□□□ -0.56
MRPS28-206ENST00000520946 ZNF677Q86XU0 584 aa11.55□□□□□ -0.56
MRPS28-206ENST00000520946 DTX1Q86Y01 620 aa11.55□□□□□ -0.56
MRPS28-206ENST00000520946 CAMK1DQ8IU85 385 aa11.55□□□□□ -0.56
MRPS28-206ENST00000520946 CACNA2D3Q8IZS8 1091 aa11.55□□□□□ -0.56
MRPS28-206ENST00000520946 CCDC185Q8N715 623 aa11.55□□□□□ -0.56
MRPS28-206ENST00000520946 PLA2G15Q8NCC3 412 aa11.55□□□□□ -0.56
MRPS28-206ENST00000520946 AGBL5Q8NDL9 886 aa11.55□□□□□ -0.56
MRPS28-206ENST00000520946 HTR3CQ8WXA8 447 aa11.55□□□□□ -0.56
MRPS28-206ENST00000520946 FUBP1Q96AE4 644 aaKnown RBP11.55□□□□□ -0.56
MRPS28-206ENST00000520946 C11orf70Q9BRQ4 267 aa11.55□□□□□ -0.56
MRPS28-206ENST00000520946 TUBGCP2Q9BSJ2 902 aa11.55□□□□□ -0.56
MRPS28-206ENST00000520946 FUCA2Q9BTY2 467 aa11.55□□□□□ -0.56
MRPS28-206ENST00000520946 ASPSCR1Q9BZE9 553 aa11.55□□□□□ -0.56
MRPS28-206ENST00000520946 FGF22Q9HCT0 170 aa11.55□□□□□ -0.56
MRPS28-206ENST00000520946 PHPT1Q9NRX4 125 aaPredicted RBP11.55□□□□□ -0.56
MRPS28-206ENST00000520946 SEPT11Q9NVA2 429 aaKnown RBP11.55□□□□□ -0.56
MRPS28-206ENST00000520946 SLC39A1Q9NY26 324 aa11.55□□□□□ -0.56
MRPS28-206ENST00000520946 ANAPC2Q9UJX6 822 aa11.55□□□□□ -0.56
MRPS28-206ENST00000520946 FHOD1Q9Y613 1164 aa11.55□□□□□ -0.56
MRPS28-206ENST00000520946 COL27A1Q8IZC6 1860 aaPredicted RBP11.55□□□□□ -0.56
MRPS28-206ENST00000520946 PRSS38A1L453 326 aa11.54□□□□□ -0.56
MRPS28-206ENST00000520946 CFAP69A5D8W1 941 aa11.54□□□□□ -0.56
MRPS28-206ENST00000520946 ARHGAP42A6NI28 874 aa11.54□□□□□ -0.56
MRPS28-206ENST00000520946 A8MX80 341 aa11.54□□□□□ -0.56
MRPS28-206ENST00000520946 CAPN5O15484 640 aaPredicted RBP11.54□□□□□ -0.56
MRPS28-206ENST00000520946 DAPK3O43293 454 aa11.54□□□□□ -0.56
MRPS28-206ENST00000520946 GFPT2O94808 682 aa11.54□□□□□ -0.56
MRPS28-206ENST00000520946 TPM2P07951 284 aa11.54□□□□□ -0.56
MRPS28-206ENST00000520946 GP1BBP13224 206 aa11.54□□□□□ -0.56
MRPS28-206ENST00000520946 WT1P19544 449 aaPredicted RBP11.54□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms