RNA–Protein interactions for RNA: ENST00000520602.5

MCF2-209, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene MCF2, Length 3,945 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-209ENST00000520602 TSGA13Q96PP4 275 aa10.2□□□□□ -0.78
MCF2-209ENST00000520602 STN1Q9H668 368 aaKnown RBP10.2□□□□□ -0.78
MCF2-209ENST00000520602 BATF3Q9NR55 127 aa10.2□□□□□ -0.78
MCF2-209ENST00000520602 OXSMQ9NWU1 459 aa10.2□□□□□ -0.78
MCF2-209ENST00000520602 LNPEPQ9UIQ6 1025 aa10.2□□□□□ -0.78
MCF2-209ENST00000520602 KIAA0100Q14667 2235 aaKnown RBP10.2□□□□□ -0.78
MCF2-209ENST00000520602 DLX3O60479 287 aa10.2□□□□□ -0.78
MCF2-209ENST00000520602 KATNA1O75449 491 aa10.2□□□□□ -0.78
MCF2-209ENST00000520602 DSG1Q02413 1049 aa10.2□□□□□ -0.78
MCF2-209ENST00000520602 GPR17Q13304 367 aa10.2□□□□□ -0.78
MCF2-209ENST00000520602 FAM45BPQ6NSW5 357 aa10.2□□□□□ -0.78
MCF2-209ENST00000520602 EP400NLQ6ZTU2 488 aa10.2□□□□□ -0.78
MCF2-209ENST00000520602 CYS1Q717R9 158 aa10.2□□□□□ -0.78
MCF2-209ENST00000520602 ASRGL1Q7L266 308 aa10.2□□□□□ -0.78
MCF2-209ENST00000520602 COLGALT2Q8IYK4 626 aa10.2□□□□□ -0.78
MCF2-209ENST00000520602 PDZD8Q8NEN9 1154 aa10.2□□□□□ -0.78
MCF2-209ENST00000520602 FAM45AQ8TCE6 357 aa10.2□□□□□ -0.78
MCF2-209ENST00000520602 PTCD2Q8WV60 388 aaKnown RBP10.2□□□□□ -0.78
MCF2-209ENST00000520602 NPAS2Q99743 824 aa10.2□□□□□ -0.78
MCF2-209ENST00000520602 C20orf27Q9GZN8 174 aa10.2□□□□□ -0.78
MCF2-209ENST00000520602 WDR41Q9HAD4 459 aa10.2□□□□□ -0.78
MCF2-209ENST00000520602 CREBZFQ9NS37 354 aa10.2□□□□□ -0.78
MCF2-209ENST00000520602 MTPAPQ9NVV4 582 aaKnown RBP eCLIP10.2□□□□□ -0.78
MCF2-209ENST00000520602 VPS9D1Q9Y2B5 631 aa10.2□□□□□ -0.78
MCF2-209ENST00000520602 HHLA1C9JL84 531 aa10.2□□□□□ -0.78
MCF2-209ENST00000520602 IPO13O94829 963 aaKnown RBP10.2□□□□□ -0.78
MCF2-209ENST00000520602 NDST3O95803 873 aa10.2□□□□□ -0.78
MCF2-209ENST00000520602 COL6A2P12110 1019 aa10.2□□□□□ -0.78
MCF2-209ENST00000520602 NNMTP40261 264 aa10.2□□□□□ -0.78
MCF2-209ENST00000520602 ANKS6Q68DC2 871 aa10.2□□□□□ -0.78
MCF2-209ENST00000520602 KRT80Q6KB66 452 aa10.2□□□□□ -0.78
MCF2-209ENST00000520602 CYP2R1Q6VVX0 501 aa10.2□□□□□ -0.78
MCF2-209ENST00000520602 NET1Q7Z628 596 aaPredicted RBP10.2□□□□□ -0.78
MCF2-209ENST00000520602 CUZD1Q86UP6 607 aa10.2□□□□□ -0.78
MCF2-209ENST00000520602 PIM3Q86V86 326 aa10.2□□□□□ -0.78
MCF2-209ENST00000520602 MAB21L3Q8N8X9 362 aa10.2□□□□□ -0.78
MCF2-209ENST00000520602 DCBLD1Q8N8Z6 715 aa10.2□□□□□ -0.78
MCF2-209ENST00000520602 MAGEC3Q8TD91 643 aa10.2□□□□□ -0.78
MCF2-209ENST00000520602 MRGPRX2Q96LB1 330 aa10.2□□□□□ -0.78
MCF2-209ENST00000520602 MIPEPQ99797 713 aa10.2□□□□□ -0.78
MCF2-209ENST00000520602 PIF1Q9H611 641 aa10.2□□□□□ -0.78
MCF2-209ENST00000520602 BTRCQ9Y297 605 aa10.2□□□□□ -0.78
MCF2-209ENST00000520602 RNF103-CHMP3A0A140T963 221 aa10.19□□□□□ -0.78
MCF2-209ENST00000520602 HMX2A2RU54 273 aa10.19□□□□□ -0.78
MCF2-209ENST00000520602 CCDC162PA2VCL2 907 aa10.19□□□□□ -0.78
MCF2-209ENST00000520602 I6L893 689 aaPredicted RBP10.19□□□□□ -0.78
MCF2-209ENST00000520602 PSMD12O00232 456 aaPredicted RBP10.19□□□□□ -0.78
MCF2-209ENST00000520602 CLDN11O75508 207 aa10.19□□□□□ -0.78
MCF2-209ENST00000520602 OAZ2O95190 189 aa10.19□□□□□ -0.78
MCF2-209ENST00000520602 ANPEPP15144 967 aa10.19□□□□□ -0.78
MCF2-209ENST00000520602 ACADSP16219 412 aa10.19□□□□□ -0.78
MCF2-209ENST00000520602 RGS4P49798 205 aa10.19□□□□□ -0.78
MCF2-209ENST00000520602 KCNK13Q9HB14 408 aa10.19□□□□□ -0.78
MCF2-209ENST00000520602 MRPL40Q9NQ50 206 aaKnown RBP10.19□□□□□ -0.78
MCF2-209ENST00000520602 NMRK1Q9NWW6 199 aa10.19□□□□□ -0.78
MCF2-209ENST00000520602 DNAJC28Q9NX36 388 aa10.19□□□□□ -0.78
MCF2-209ENST00000520602 CLIC5Q9NZA1 410 aa10.19□□□□□ -0.78
MCF2-209ENST00000520602 SLC7A8Q9UHI5 535 aa10.19□□□□□ -0.78
MCF2-209ENST00000520602 MYO9BQ13459 2157 aa10.19□□□□□ -0.78
MCF2-209ENST00000520602 AURKAO14965 403 aa10.19□□□□□ -0.78
MCF2-209ENST00000520602 AKAP10O43572 662 aa10.19□□□□□ -0.78
MCF2-209ENST00000520602 BAIAP3O94812 1187 aa10.19□□□□□ -0.78
MCF2-209ENST00000520602 GALTP07902 379 aa10.19□□□□□ -0.78
MCF2-209ENST00000520602 MAGEA3P43357 314 aa10.19□□□□□ -0.78
MCF2-209ENST00000520602 STXBP5Q5T5C0 1151 aa10.19□□□□□ -0.78
MCF2-209ENST00000520602 KIAA0408Q6ZU52 694 aa10.19□□□□□ -0.78
MCF2-209ENST00000520602 ST13P4Q8IZP2 240 aaPredicted RBP10.19□□□□□ -0.78
MCF2-209ENST00000520602 ARL14EPQ8N8R7 260 aaPredicted RBP10.19□□□□□ -0.78
MCF2-209ENST00000520602 SLAIN1Q8ND83 568 aa10.19□□□□□ -0.78
MCF2-209ENST00000520602 ESAMQ96AP7 390 aa10.19□□□□□ -0.78
MCF2-209ENST00000520602 IL12RB2Q99665 862 aa10.19□□□□□ -0.78
MCF2-209ENST00000520602 PIDD1Q9HB75 910 aa10.19□□□□□ -0.78
MCF2-209ENST00000520602 SLC24A3Q9HC58 644 aa10.19□□□□□ -0.78
MCF2-209ENST00000520602 MRPL17Q9NRX2 175 aaKnown RBP10.19□□□□□ -0.78
MCF2-209ENST00000520602 OSER1Q9NX31 292 aa10.19□□□□□ -0.78
MCF2-209ENST00000520602 ZDHHC2Q9UIJ5 367 aa10.19□□□□□ -0.78
MCF2-209ENST00000520602 SLC8A2Q9UPR5 921 aa10.19□□□□□ -0.78
MCF2-209ENST00000520602 TRAF6Q9Y4K3 522 aa10.19□□□□□ -0.78
MCF2-209ENST00000520602 RAI2Q9Y5P3 530 aa10.19□□□□□ -0.78
MCF2-209ENST00000520602 TRIP12Q14669 1992 aaPredicted RBP10.19□□□□□ -0.78
MCF2-209ENST00000520602 TRIP11Q15643 1979 aa10.19□□□□□ -0.78
MCF2-209ENST00000520602 ZNFX1Q9P2E3 1918 aaKnown RBP10.19□□□□□ -0.78
MCF2-209ENST00000520602 C9JVG2 144 aa10.19□□□□□ -0.78
MCF2-209ENST00000520602 RPP40O75818 363 aaKnown RBP10.19□□□□□ -0.78
MCF2-209ENST00000520602 WFS1O76024 890 aa10.19□□□□□ -0.78
MCF2-209ENST00000520602 GJB5O95377 273 aa10.19□□□□□ -0.78
MCF2-209ENST00000520602 LPOP22079 712 aaPredicted RBP10.19□□□□□ -0.78
MCF2-209ENST00000520602 MC4RP32245 332 aa10.19□□□□□ -0.78
MCF2-209ENST00000520602 TLE2Q04725 743 aa10.19□□□□□ -0.78
MCF2-209ENST00000520602 BTKQ06187 659 aa10.19□□□□□ -0.78
MCF2-209ENST00000520602 AARS2Q5JTZ9 985 aaKnown RBP10.19□□□□□ -0.78
MCF2-209ENST00000520602 ARMC12Q5T9G4 340 aa10.19□□□□□ -0.78
MCF2-209ENST00000520602 MSANTD2Q6P1R3 559 aa10.19□□□□□ -0.78
MCF2-209ENST00000520602 CEP97Q8IW35 865 aa10.19□□□□□ -0.78
MCF2-209ENST00000520602 ARHGAP12Q8IWW6 846 aa10.19□□□□□ -0.78
MCF2-209ENST00000520602 HS6ST3Q8IZP7 471 aa10.19□□□□□ -0.78
MCF2-209ENST00000520602 FBXO27Q8NI29 283 aa10.19□□□□□ -0.78
MCF2-209ENST00000520602 STAG3L4Q8TBR4 150 aa10.19□□□□□ -0.78
MCF2-209ENST00000520602 ZBTB18Q99592 522 aa10.19□□□□□ -0.78
MCF2-209ENST00000520602 MYO7AQ13402 2215 aa10.19□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms