RNA–Protein interactions for RNA: ENST00000520008.5

POLB-208, Transcript of DNA polymerase beta, humanhuman

TSL 2

Gene POLB, Length 725 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLB-208ENST00000520008 OGFOD3Q6PK18 319 aa11.86□□□□□ -0.51
POLB-208ENST00000520008 GKN2Q86XP6 184 aa11.86□□□□□ -0.51
POLB-208ENST00000520008 NPWQ8N729 165 aa11.86□□□□□ -0.51
POLB-208ENST00000520008 TSEN2Q8NCE0 465 aaKnown RBP11.86□□□□□ -0.51
POLB-208ENST00000520008 OR6C4Q8NGE1 309 aa11.86□□□□□ -0.51
POLB-208ENST00000520008 SCG3Q8WXD2 468 aaKnown RBP11.86□□□□□ -0.51
POLB-208ENST00000520008 FUBP1Q96AE4 644 aaKnown RBP11.86□□□□□ -0.51
POLB-208ENST00000520008 CELF6Q96J87 481 aaKnown RBP11.86□□□□□ -0.51
POLB-208ENST00000520008 GFM1Q96RP9 751 aaKnown RBP11.86□□□□□ -0.51
POLB-208ENST00000520008 PEBP4Q96S96 227 aa11.86□□□□□ -0.51
POLB-208ENST00000520008 EIF3CQ99613 913 aaKnown RBP11.86□□□□□ -0.51
POLB-208ENST00000520008 SLC39A8Q9C0K1 460 aa11.86□□□□□ -0.51
POLB-208ENST00000520008 FGF22Q9HCT0 170 aa11.86□□□□□ -0.51
POLB-208ENST00000520008 GPATCH2LQ9NWQ4 482 aa11.86□□□□□ -0.51
POLB-208ENST00000520008 TAS2R14Q9NYV8 317 aa11.86□□□□□ -0.51
POLB-208ENST00000520008 SIRPGQ9P1W8 387 aa11.86□□□□□ -0.51
POLB-208ENST00000520008 GULP1Q9UBP9 304 aa11.86□□□□□ -0.51
POLB-208ENST00000520008 KLQ9UEF7 1012 aa11.86□□□□□ -0.51
POLB-208ENST00000520008 APPL1Q9UKG1 709 aa11.86□□□□□ -0.51
POLB-208ENST00000520008 ATXN7L1Q9ULK2 861 aaPredicted RBP11.86□□□□□ -0.51
POLB-208ENST00000520008 AP4E1Q9UPM8 1137 aa11.86□□□□□ -0.51
POLB-208ENST00000520008 ANKRD62A6NC57 917 aa11.85□□□□□ -0.51
POLB-208ENST00000520008 NOBOXO60393 691 aa11.85□□□□□ -0.51
POLB-208ENST00000520008 PRKCGP05129 697 aa11.85□□□□□ -0.51
POLB-208ENST00000520008 PCCBP05166 539 aa11.85□□□□□ -0.51
POLB-208ENST00000520008 RPLP0P05388 317 aaKnown RBP11.85□□□□□ -0.51
POLB-208ENST00000520008 HOXC4P09017 264 aaPredicted RBP11.85□□□□□ -0.51
POLB-208ENST00000520008 CTSEP14091 401 aa11.85□□□□□ -0.51
POLB-208ENST00000520008 PNLIPP16233 465 aa11.85□□□□□ -0.51
POLB-208ENST00000520008 SERPINA4P29622 427 aa11.85□□□□□ -0.51
POLB-208ENST00000520008 UGT1A5P35504 534 aa11.85□□□□□ -0.51
POLB-208ENST00000520008 PAPOLAP51003 745 aaKnown RBP11.85□□□□□ -0.51
POLB-208ENST00000520008 CCL7P80098 99 aa11.85□□□□□ -0.51
POLB-208ENST00000520008 MYL5Q02045 173 aa11.85□□□□□ -0.51
POLB-208ENST00000520008 NSUN2Q08J23 767 aaKnown RBP eCLIP11.85□□□□□ -0.51
POLB-208ENST00000520008 MAMLD1Q13495 774 aa11.85□□□□□ -0.51
POLB-208ENST00000520008 NCAPHQ15003 741 aa11.85□□□□□ -0.51
POLB-208ENST00000520008 TCEA2Q15560 299 aa11.85□□□□□ -0.51
POLB-208ENST00000520008 KIAA1614Q5VZ46 1190 aa11.85□□□□□ -0.51
POLB-208ENST00000520008 PLEKHA7Q6IQ23 1121 aa11.85□□□□□ -0.51
POLB-208ENST00000520008 FOXR1Q6PIV2 292 aa11.85□□□□□ -0.51
POLB-208ENST00000520008 LIPIQ6XZB0 460 aa11.85□□□□□ -0.51
POLB-208ENST00000520008 ARHGAP36Q6ZRI8 547 aa11.85□□□□□ -0.51
POLB-208ENST00000520008 DPPA4Q7L190 304 aa11.85□□□□□ -0.51
POLB-208ENST00000520008 RAB11FIP2Q7L804 512 aa11.85□□□□□ -0.51
POLB-208ENST00000520008 IRF2BP2Q7Z5L9 587 aa11.85□□□□□ -0.51
POLB-208ENST00000520008 SRLQ86TD4 932 aa11.85□□□□□ -0.51
POLB-208ENST00000520008 SFTPA2Q8IWL1 248 aa11.85□□□□□ -0.51
POLB-208ENST00000520008 OR56A4Q8NGH8 313 aa11.85□□□□□ -0.51
POLB-208ENST00000520008 ATL2Q8NHH9 583 aa11.85□□□□□ -0.51
POLB-208ENST00000520008 OR1E3Q8WZA6 343 aa11.85□□□□□ -0.51
POLB-208ENST00000520008 SNRNP25Q9BV90 132 aaKnown RBP11.85□□□□□ -0.51
POLB-208ENST00000520008 FOXP3Q9BZS1 431 aa11.85□□□□□ -0.51
POLB-208ENST00000520008 LRRN3Q9H3W5 708 aa11.85□□□□□ -0.51
POLB-208ENST00000520008 ATP13A3Q9H7F0 1226 aa11.85□□□□□ -0.51
POLB-208ENST00000520008 SEPT11Q9NVA2 429 aaKnown RBP11.85□□□□□ -0.51
POLB-208ENST00000520008 DONSONQ9NYP3 566 aa11.85□□□□□ -0.51
POLB-208ENST00000520008 GPR34Q9UPC5 381 aa11.85□□□□□ -0.51
POLB-208ENST00000520008 DOLKQ9UPQ8 538 aa11.85□□□□□ -0.51
POLB-208ENST00000520008 ARHGAP42A6NI28 874 aa11.84□□□□□ -0.51
POLB-208ENST00000520008 TMX2-CTNND1H3BSU7 103 aa11.84□□□□□ -0.51
POLB-208ENST00000520008 J3QKU1 62 aa11.84□□□□□ -0.51
POLB-208ENST00000520008 EEF2KO00418 725 aaKnown RBP11.84□□□□□ -0.51
POLB-208ENST00000520008 TNFRSF10CO14798 259 aa11.84□□□□□ -0.51
POLB-208ENST00000520008 RECQL5O94762 991 aaPredicted RBP11.84□□□□□ -0.51
POLB-208ENST00000520008 GLB1P16278 677 aa11.84□□□□□ -0.51
POLB-208ENST00000520008 FERP16591 822 aa11.84□□□□□ -0.51
POLB-208ENST00000520008 SLC5A2P31639 672 aa11.84□□□□□ -0.51
POLB-208ENST00000520008 INHBCP55103 352 aa11.84□□□□□ -0.51
POLB-208ENST00000520008 UBXN1Q04323 297 aa11.84□□□□□ -0.51
POLB-208ENST00000520008 ZFP36L1Q07352 338 aaKnown RBP11.84□□□□□ -0.51
POLB-208ENST00000520008 HLTFQ14527 1009 aaKnown RBP eCLIP11.84□□□□□ -0.51
POLB-208ENST00000520008 RFTN1Q14699 578 aaPredicted RBP11.84□□□□□ -0.51
POLB-208ENST00000520008 DCUN1D2Q6PH85 259 aa11.84□□□□□ -0.51
POLB-208ENST00000520008 CCDC81Q6ZN84 652 aa11.84□□□□□ -0.51
POLB-208ENST00000520008 RFX8Q6ZV50 586 aa11.84□□□□□ -0.51
POLB-208ENST00000520008 RD3Q7Z3Z2 195 aa11.84□□□□□ -0.51
POLB-208ENST00000520008 SPRED1Q7Z699 444 aa11.84□□□□□ -0.51
POLB-208ENST00000520008 CCNJLQ8IV13 435 aa11.84□□□□□ -0.51
POLB-208ENST00000520008 PELI3Q8N2H9 469 aa11.84□□□□□ -0.51
POLB-208ENST00000520008 MED8Q96G25 268 aa11.84□□□□□ -0.51
POLB-208ENST00000520008 CCNL2Q96S94 520 aaPredicted RBP11.84□□□□□ -0.51
POLB-208ENST00000520008 KCTD15Q96SI1 283 aaPredicted RBP11.84□□□□□ -0.51
POLB-208ENST00000520008 DHX35Q9H5Z1 703 aaKnown RBP11.84□□□□□ -0.51
POLB-208ENST00000520008 SYNDIG1Q9H7V2 258 aa11.84□□□□□ -0.51
POLB-208ENST00000520008 EPB41L5Q9HCM4 733 aa11.84□□□□□ -0.51
POLB-208ENST00000520008 MRPL40Q9NQ50 206 aaKnown RBP11.84□□□□□ -0.51
POLB-208ENST00000520008 MYO18BQ8IUG5 2567 aa11.83□□□□□ -0.52
POLB-208ENST00000520008 AHCTF1Q8WYP5 2266 aa11.83□□□□□ -0.52
POLB-208ENST00000520008 TMEM191CA6NGB0 347 aa11.83□□□□□ -0.52
POLB-208ENST00000520008 B8ZZF3 427 aa11.83□□□□□ -0.52
POLB-208ENST00000520008 CACNB4O00305 520 aaPredicted RBP11.83□□□□□ -0.52
POLB-208ENST00000520008 NVLO15381 856 aaKnown RBP11.83□□□□□ -0.52
POLB-208ENST00000520008 ATMINO43313 823 aaPredicted RBP11.83□□□□□ -0.52
POLB-208ENST00000520008 PALMO75781 387 aa11.83□□□□□ -0.52
POLB-208ENST00000520008 TNFP01375 233 aa11.83□□□□□ -0.52
POLB-208ENST00000520008 ELFN1P0C7U0 828 aa11.83□□□□□ -0.52
POLB-208ENST00000520008 HGFP14210 728 aa11.83□□□□□ -0.52
POLB-208ENST00000520008 ERCC2P18074 760 aa11.83□□□□□ -0.52
POLB-208ENST00000520008 CR2P20023 1033 aa11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms