RNA–Protein interactions for RNA: ENST00000519767.5

VEGFA-220, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best)

Gene VEGFA, Length 970 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-220ENST00000519767 SRP54P61011 504 aaKnown RBP25.46■■□□□ 1.67
VEGFA-220ENST00000519767 SLC10A7Q0GE19 358 aa25.46■■□□□ 1.67
VEGFA-220ENST00000519767 ENPP7Q6UWV6 458 aa25.46■■□□□ 1.67
VEGFA-220ENST00000519767 DPPA4Q7L190 304 aa25.46■■□□□ 1.67
VEGFA-220ENST00000519767 LRRC49Q8IUZ0 686 aa25.46■■□□□ 1.67
VEGFA-220ENST00000519767 BBS5Q8N3I7 341 aa25.46■■□□□ 1.67
VEGFA-220ENST00000519767 HSPH1Q92598 858 aa25.46■■□□□ 1.67
VEGFA-220ENST00000519767 CSPG4P5Q96PW8 444 aa25.46■■□□□ 1.67
VEGFA-220ENST00000519767 STAU2Q9NUL3 570 aaKnown RBP eCLIP25.46■■□□□ 1.67
VEGFA-220ENST00000519767 PADI4Q9UM07 663 aa25.46■■□□□ 1.67
VEGFA-220ENST00000519767 MYLKQ15746 1914 aa25.45■■□□□ 1.67
VEGFA-220ENST00000519767 MUSKO15146 869 aa25.45■■□□□ 1.66
VEGFA-220ENST00000519767 TCEA3O75764 348 aa25.45■■□□□ 1.66
VEGFA-220ENST00000519767 DXOO77932 396 aaKnown RBP25.45■■□□□ 1.66
VEGFA-220ENST00000519767 RECQL5O94762 991 aaPredicted RBP25.45■■□□□ 1.66
VEGFA-220ENST00000519767 HOXC4P09017 264 aaPredicted RBP25.45■■□□□ 1.66
VEGFA-220ENST00000519767 ELFN1P0C7U0 828 aa25.45■■□□□ 1.66
VEGFA-220ENST00000519767 TGM2P21980 687 aa25.45■■□□□ 1.66
VEGFA-220ENST00000519767 NFKBIAP25963 317 aa25.45■■□□□ 1.66
VEGFA-220ENST00000519767 ZNF235Q14590 738 aa25.45■■□□□ 1.66
VEGFA-220ENST00000519767 ISXQ2M1V0 245 aa25.45■■□□□ 1.66
VEGFA-220ENST00000519767 ALG11Q2TAA5 492 aa25.45■■□□□ 1.66
VEGFA-220ENST00000519767 SMTNL2Q2TAL5 461 aa25.45■■□□□ 1.66
VEGFA-220ENST00000519767 LIPIQ6XZB0 460 aa25.45■■□□□ 1.66
VEGFA-220ENST00000519767 GKN2Q86XP6 184 aa25.45■■□□□ 1.66
VEGFA-220ENST00000519767 SLC35F3Q8IY50 421 aa25.45■■□□□ 1.66
VEGFA-220ENST00000519767 NSMCE1Q8WV22 266 aa25.45■■□□□ 1.66
VEGFA-220ENST00000519767 CPLX3Q8WVH0 158 aa25.45■■□□□ 1.66
VEGFA-220ENST00000519767 TSACCQ96A04 125 aaPredicted RBP25.45■■□□□ 1.66
VEGFA-220ENST00000519767 WDR92Q96MX6 357 aa25.45■■□□□ 1.66
VEGFA-220ENST00000519767 THAP2Q9H0W7 228 aa25.45■■□□□ 1.66
VEGFA-220ENST00000519767 POLR1BQ9H9Y6 1135 aa25.45■■□□□ 1.66
VEGFA-220ENST00000519767 KCTD5Q9NXV2 234 aa25.45■■□□□ 1.66
VEGFA-220ENST00000519767 KLQ9UEF7 1012 aa25.45■■□□□ 1.66
VEGFA-220ENST00000519767 OR1A2Q9Y585 309 aa25.45■■□□□ 1.66
VEGFA-220ENST00000519767 MYO1FO00160 1098 aa25.44■■□□□ 1.66
VEGFA-220ENST00000519767 TNFP01375 233 aa25.44■■□□□ 1.66
VEGFA-220ENST00000519767 PRKCGP05129 697 aa25.44■■□□□ 1.66
VEGFA-220ENST00000519767 CYP1A2P05177 515 aa25.44■■□□□ 1.66
VEGFA-220ENST00000519767 KELP23276 732 aa25.44■■□□□ 1.66
VEGFA-220ENST00000519767 SERPINB6P35237 376 aa25.44■■□□□ 1.66
VEGFA-220ENST00000519767 NFKBIBQ15653 356 aa25.44■■□□□ 1.66
VEGFA-220ENST00000519767 RALGPS1Q5JS13 557 aa25.44■■□□□ 1.66
VEGFA-220ENST00000519767 RD3Q7Z3Z2 195 aa25.44■■□□□ 1.66
VEGFA-220ENST00000519767 TP53INP2Q8IXH6 220 aa25.44■■□□□ 1.66
VEGFA-220ENST00000519767 NUP85Q9BW27 656 aa25.44■■□□□ 1.66
VEGFA-220ENST00000519767 RCOR3Q9P2K3 495 aaPredicted RBP25.44■■□□□ 1.66
VEGFA-220ENST00000519767 DGKBQ9Y6T7 804 aa25.44■■□□□ 1.66
VEGFA-220ENST00000519767 CACNB4O00305 520 aaPredicted RBP25.43■■□□□ 1.66
VEGFA-220ENST00000519767 HTRA2O43464 458 aaPredicted RBP25.43■■□□□ 1.66
VEGFA-220ENST00000519767 SOCS5O75159 536 aa25.43■■□□□ 1.66
VEGFA-220ENST00000519767 PEX11BO96011 259 aa25.43■■□□□ 1.66
VEGFA-220ENST00000519767 PCCBP05166 539 aa25.43■■□□□ 1.66
VEGFA-220ENST00000519767 HOXB3P14651 431 aaPredicted RBP25.43■■□□□ 1.66
VEGFA-220ENST00000519767 TCF4P15884 667 aa25.43■■□□□ 1.66
VEGFA-220ENST00000519767 ITPKBP27987 946 aa25.43■■□□□ 1.66
VEGFA-220ENST00000519767 TRIM23P36406 574 aa25.43■■□□□ 1.66
VEGFA-220ENST00000519767 ERVPABLB-1P60509 514 aa25.43■■□□□ 1.66
VEGFA-220ENST00000519767 RALGDSQ12967 914 aa25.43■■□□□ 1.66
VEGFA-220ENST00000519767 ALKBH5Q6P6C2 394 aaKnown RBP25.43■■□□□ 1.66
VEGFA-220ENST00000519767 RBM44Q6ZP01 1051 aaKnown RBP25.43■■□□□ 1.66
VEGFA-220ENST00000519767 NUDCD1Q96RS6 583 aa25.43■■□□□ 1.66
VEGFA-220ENST00000519767 PCDH18Q9HCL0 1135 aa25.43■■□□□ 1.66
VEGFA-220ENST00000519767 ETNK2Q9NVF9 386 aa25.43■■□□□ 1.66
VEGFA-220ENST00000519767 ANAPC7Q9UJX3 599 aa25.43■■□□□ 1.66
VEGFA-220ENST00000519767 FASNP49327 2511 aaKnown RBP25.43■■□□□ 1.66
VEGFA-220ENST00000519767 A0A087X0T9 212 aa25.42■■□□□ 1.66
VEGFA-220ENST00000519767 PDE2AO00408 941 aaPredicted RBP25.42■■□□□ 1.66
VEGFA-220ENST00000519767 TNFRSF10CO14798 259 aa25.42■■□□□ 1.66
VEGFA-220ENST00000519767 MAFKO60675 156 aa25.42■■□□□ 1.66
VEGFA-220ENST00000519767 MPOP05164 745 aa25.42■■□□□ 1.66
VEGFA-220ENST00000519767 FAM228BP0C875 321 aa25.42■■□□□ 1.66
VEGFA-220ENST00000519767 CDH6P55285 790 aa25.42■■□□□ 1.66
VEGFA-220ENST00000519767 KIAA1024LP59773 190 aa25.42■■□□□ 1.66
VEGFA-220ENST00000519767 GABREP78334 506 aa25.42■■□□□ 1.66
VEGFA-220ENST00000519767 HADHQ16836 314 aaKnown RBP25.42■■□□□ 1.66
VEGFA-220ENST00000519767 SOWAHCQ53LP3 525 aaPredicted RBP25.42■■□□□ 1.66
VEGFA-220ENST00000519767 ARL10Q8N8L6 244 aa25.42■■□□□ 1.66
VEGFA-220ENST00000519767 PLA2G15Q8NCC3 412 aa25.42■■□□□ 1.66
VEGFA-220ENST00000519767 OR6C4Q8NGE1 309 aa25.42■■□□□ 1.66
VEGFA-220ENST00000519767 GULP1Q9UBP9 304 aa25.42■■□□□ 1.66
VEGFA-220ENST00000519767 CR2P20023 1033 aa25.41■■□□□ 1.66
VEGFA-220ENST00000519767 KRT81Q14533 505 aa25.41■■□□□ 1.66
VEGFA-220ENST00000519767 ACOX1Q15067 660 aa25.41■■□□□ 1.66
VEGFA-220ENST00000519767 PERM1Q5SV97 790 aa25.41■■□□□ 1.66
VEGFA-220ENST00000519767 CCDC122Q5T0U0 273 aa25.41■■□□□ 1.66
VEGFA-220ENST00000519767 MARC1Q5VT66 337 aa25.41■■□□□ 1.66
VEGFA-220ENST00000519767 IGF2-ASQ6U949 168 aa25.41■■□□□ 1.66
VEGFA-220ENST00000519767 ATPAF2Q8N5M1 289 aa25.41■■□□□ 1.66
VEGFA-220ENST00000519767 ZNF248Q8NDW4 579 aa25.41■■□□□ 1.66
VEGFA-220ENST00000519767 OR56A4Q8NGH8 313 aa25.41■■□□□ 1.66
VEGFA-220ENST00000519767 RBM15Q96T37 977 aaKnown RBP eCLIP25.41■■□□□ 1.661e-8■■□□□ 12.7
VEGFA-220ENST00000519767 NOD2Q9HC29 1040 aa25.41■■□□□ 1.66
VEGFA-220ENST00000519767 PHTF1Q9UMS5 762 aa25.41■■□□□ 1.66
VEGFA-220ENST00000519767 GPR34Q9UPC5 381 aa25.41■■□□□ 1.66
VEGFA-220ENST00000519767 PCDHGC4Q9Y5F7 938 aa25.41■■□□□ 1.66
VEGFA-220ENST00000519767 TPM3P06753 285 aa25.4■■□□□ 1.66
VEGFA-220ENST00000519767 PTMSP20962 102 aa25.4■■□□□ 1.66
VEGFA-220ENST00000519767 PCBP4P57723 403 aaKnown RBP25.4■■□□□ 1.66
VEGFA-220ENST00000519767 SLC25A11Q02978 314 aaKnown RBP25.4■■□□□ 1.66
Retrieved 100 of 20,778 RNA–protein pairs in 64.1 ms