RNA–Protein interactions for RNA: ENST00000519623.1

CSMD1-205, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 4

Gene CSMD1, Length 590 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-205ENST00000519623 RD3Q7Z3Z2 195 aa12.51□□□□□ -0.41
CSMD1-205ENST00000519623 SDR16C5Q8N3Y7 309 aa12.51□□□□□ -0.41
CSMD1-205ENST00000519623 LZTR1Q8N653 840 aa12.51□□□□□ -0.41
CSMD1-205ENST00000519623 ZNF248Q8NDW4 579 aa12.51□□□□□ -0.41
CSMD1-205ENST00000519623 NAT6Q93015 286 aa12.51□□□□□ -0.41
CSMD1-205ENST00000519623 FUBP1Q96AE4 644 aaKnown RBP12.51□□□□□ -0.41
CSMD1-205ENST00000519623 ZNF653Q96CK0 615 aa12.51□□□□□ -0.41
CSMD1-205ENST00000519623 SLC46A1Q96NT5 459 aa12.51□□□□□ -0.41
CSMD1-205ENST00000519623 PSKH2Q96QS6 385 aa12.51□□□□□ -0.41
CSMD1-205ENST00000519623 UBL7Q96S82 380 aaPredicted RBP12.51□□□□□ -0.41
CSMD1-205ENST00000519623 CCDC3Q9BQI4 270 aa12.51□□□□□ -0.41
CSMD1-205ENST00000519623 FUCA2Q9BTY2 467 aa12.51□□□□□ -0.41
CSMD1-205ENST00000519623 CINPQ9BW66 212 aaPredicted RBP12.51□□□□□ -0.41
CSMD1-205ENST00000519623 SP110Q9HB58 689 aa12.51□□□□□ -0.41
CSMD1-205ENST00000519623 ETNK2Q9NVF9 386 aa12.51□□□□□ -0.41
CSMD1-205ENST00000519623 MYO1AQ9UBC5 1043 aa12.51□□□□□ -0.41
CSMD1-205ENST00000519623 SATB2Q9UPW6 733 aa12.51□□□□□ -0.41
CSMD1-205ENST00000519623 DGKBQ9Y6T7 804 aa12.51□□□□□ -0.41
CSMD1-205ENST00000519623 SCINQ9Y6U3 715 aa12.51□□□□□ -0.41
CSMD1-205ENST00000519623 UNC13CQ8NB66 2214 aa12.51□□□□□ -0.41
CSMD1-205ENST00000519623 TTC24A2A3L6 582 aaPredicted RBP12.5□□□□□ -0.41
CSMD1-205ENST00000519623 NTN3O00634 580 aaPredicted RBP12.5□□□□□ -0.41
CSMD1-205ENST00000519623 RECQL5O94762 991 aaPredicted RBP12.5□□□□□ -0.41
CSMD1-205ENST00000519623 PCCBP05166 539 aa12.5□□□□□ -0.41
CSMD1-205ENST00000519623 HOXC4P09017 264 aaPredicted RBP12.5□□□□□ -0.41
CSMD1-205ENST00000519623 ALPIP09923 528 aa12.5□□□□□ -0.41
CSMD1-205ENST00000519623 MYBL1P10243 752 aa12.5□□□□□ -0.41
CSMD1-205ENST00000519623 CTSEP14091 401 aa12.5□□□□□ -0.41
CSMD1-205ENST00000519623 AMPD1P23109 780 aa12.5□□□□□ -0.41
CSMD1-205ENST00000519623 HTR1BP28222 390 aa12.5□□□□□ -0.41
CSMD1-205ENST00000519623 TRIM23P36406 574 aa12.5□□□□□ -0.41
CSMD1-205ENST00000519623 RENBPP51606 427 aa12.5□□□□□ -0.41
CSMD1-205ENST00000519623 PDX1P52945 283 aa12.5□□□□□ -0.41
CSMD1-205ENST00000519623 PCBP4P57723 403 aaKnown RBP12.5□□□□□ -0.41
CSMD1-205ENST00000519623 POLR2LP62875 67 aaKnown RBP12.5□□□□□ -0.41
CSMD1-205ENST00000519623 LBRQ14739 615 aaKnown RBP12.5□□□□□ -0.41
CSMD1-205ENST00000519623 DPYSL2Q16555 572 aa12.5□□□□□ -0.41
CSMD1-205ENST00000519623 BOLA3Q53S33 107 aa12.5□□□□□ -0.41
CSMD1-205ENST00000519623 FIGNQ5HY92 759 aa12.5□□□□□ -0.41
CSMD1-205ENST00000519623 DPPA4Q7L190 304 aa12.5□□□□□ -0.41
CSMD1-205ENST00000519623 POLNQ7Z5Q5 900 aa12.5□□□□□ -0.41
CSMD1-205ENST00000519623 CBARPQ8N350 705 aaPredicted RBP12.5□□□□□ -0.41
CSMD1-205ENST00000519623 PCDH19Q8TAB3 1148 aa12.5□□□□□ -0.41
CSMD1-205ENST00000519623 SCG3Q8WXD2 468 aaKnown RBP12.5□□□□□ -0.41
CSMD1-205ENST00000519623 SPOCK2Q92563 424 aa12.5□□□□□ -0.41
CSMD1-205ENST00000519623 NAF1Q96HR8 494 aaKnown RBP12.5□□□□□ -0.41
CSMD1-205ENST00000519623 WDR92Q96MX6 357 aa12.5□□□□□ -0.41
CSMD1-205ENST00000519623 ZNF599Q96NL3 588 aa12.5□□□□□ -0.41
CSMD1-205ENST00000519623 FCRL3Q96P31 734 aaPredicted RBP12.5□□□□□ -0.41
CSMD1-205ENST00000519623 RBM15Q96T37 977 aaKnown RBP eCLIP12.5□□□□□ -0.41
CSMD1-205ENST00000519623 LGMNQ99538 433 aa12.5□□□□□ -0.41
CSMD1-205ENST00000519623 MRPL47Q9HD33 250 aaKnown RBP12.5□□□□□ -0.41
CSMD1-205ENST00000519623 GULP1Q9UBP9 304 aa12.5□□□□□ -0.41
CSMD1-205ENST00000519623 KLQ9UEF7 1012 aa12.5□□□□□ -0.41
CSMD1-205ENST00000519623 SEPT3Q9UH03 358 aa12.5□□□□□ -0.41
CSMD1-205ENST00000519623 RABGEF1Q9UJ41 708 aa12.5□□□□□ -0.41
CSMD1-205ENST00000519623 SSUH2Q9Y2M2 353 aa12.5□□□□□ -0.41
CSMD1-205ENST00000519623 ARHGEF17Q96PE2 2063 aaPredicted RBP12.5□□□□□ -0.41
CSMD1-205ENST00000519623 GCN1Q92616 2671 aaKnown RBP12.49□□□□□ -0.41
CSMD1-205ENST00000519623 PMS2P1A4D2B8 440 aa12.49□□□□□ -0.41
CSMD1-205ENST00000519623 TMEM202A6NGA9 273 aa12.49□□□□□ -0.41
CSMD1-205ENST00000519623 A8MX80 341 aa12.49□□□□□ -0.41
CSMD1-205ENST00000519623 HTRA2O43464 458 aaPredicted RBP12.49□□□□□ -0.41
CSMD1-205ENST00000519623 TNFP01375 233 aa12.49□□□□□ -0.41
CSMD1-205ENST00000519623 RARAP10276 462 aa12.49□□□□□ -0.41
CSMD1-205ENST00000519623 CR2P20023 1033 aa12.49□□□□□ -0.41
CSMD1-205ENST00000519623 PBX1P40424 430 aa12.49□□□□□ -0.41
CSMD1-205ENST00000519623 AP1S1P61966 158 aa12.49□□□□□ -0.41
CSMD1-205ENST00000519623 SKOR1P84550 965 aa12.49□□□□□ -0.41
CSMD1-205ENST00000519623 TCEA2Q15560 299 aa12.49□□□□□ -0.41
CSMD1-205ENST00000519623 C3orf38Q5JPI3 329 aa12.49□□□□□ -0.41
CSMD1-205ENST00000519623 TMCO4Q5TGY1 634 aa12.49□□□□□ -0.41
CSMD1-205ENST00000519623 TXNRD3NBQ6F5E7 133 aa12.49□□□□□ -0.41
CSMD1-205ENST00000519623 CAVIN1Q6NZI2 390 aaKnown RBP12.49□□□□□ -0.41
CSMD1-205ENST00000519623 OGFOD3Q6PK18 319 aa12.49□□□□□ -0.41
CSMD1-205ENST00000519623 GPR155Q7Z3F1 870 aa12.49□□□□□ -0.41
CSMD1-205ENST00000519623 GKN2Q86XP6 184 aa12.49□□□□□ -0.41
CSMD1-205ENST00000519623 PELI3Q8N2H9 469 aa12.49□□□□□ -0.41
CSMD1-205ENST00000519623 PGBD5Q8N414 524 aa12.49□□□□□ -0.41
CSMD1-205ENST00000519623 ARL10Q8N8L6 244 aa12.49□□□□□ -0.41
CSMD1-205ENST00000519623 KYQ8NBH2 561 aa12.49□□□□□ -0.41
CSMD1-205ENST00000519623 ATL2Q8NHH9 583 aa12.49□□□□□ -0.41
CSMD1-205ENST00000519623 WDR48Q8TAF3 677 aa12.49□□□□□ -0.41
CSMD1-205ENST00000519623 OR1E3Q8WZA6 343 aa12.49□□□□□ -0.41
CSMD1-205ENST00000519623 TRIM11Q96F44 468 aa12.49□□□□□ -0.41
CSMD1-205ENST00000519623 LGR4Q9BXB1 951 aa12.49□□□□□ -0.41
CSMD1-205ENST00000519623 ZWILCHQ9H900 591 aa12.49□□□□□ -0.41
CSMD1-205ENST00000519623 SIRPGQ9P1W8 387 aa12.49□□□□□ -0.41
CSMD1-205ENST00000519623 GPR34Q9UPC5 381 aa12.49□□□□□ -0.41
CSMD1-205ENST00000519623 DOLKQ9UPQ8 538 aa12.49□□□□□ -0.41
CSMD1-205ENST00000519623 PCDHGA8Q9Y5G5 932 aa12.49□□□□□ -0.41
CSMD1-205ENST00000519623 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP12.48□□□□□ -0.41
CSMD1-205ENST00000519623 A0A1W2PQM1 296 aa12.48□□□□□ -0.41
CSMD1-205ENST00000519623 CDRT15L2A8MXV6 281 aa12.48□□□□□ -0.41
CSMD1-205ENST00000519623 H3BRJ5 948 aa12.48□□□□□ -0.41
CSMD1-205ENST00000519623 TK2O00142 265 aa12.48□□□□□ -0.41
CSMD1-205ENST00000519623 TNFRSF10CO14798 259 aa12.48□□□□□ -0.41
CSMD1-205ENST00000519623 ATXN7O15265 892 aaPredicted RBP12.48□□□□□ -0.41
CSMD1-205ENST00000519623 KALRNO60229 2985 aa12.48□□□□□ -0.41
CSMD1-205ENST00000519623 MAFKO60675 156 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms