RNA–Protein interactions for RNA: ENST00000519115.5

SDCBP-206, Transcript of syndecan binding protein, humanhuman

TSL 2

Gene SDCBP, Length 812 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-206ENST00000519115 CEP44Q9C0F1 390 aa7.67□□□□□ -1.18
SDCBP-206ENST00000519115 BTBD1Q9H0C5 482 aa7.67□□□□□ -1.18
SDCBP-206ENST00000519115 NEUROG2Q9H2A3 272 aa7.67□□□□□ -1.18
SDCBP-206ENST00000519115 ZDHHC6Q9H6R6 413 aa7.67□□□□□ -1.18
SDCBP-206ENST00000519115 ROPN1Q9HAT0 212 aaPredicted RBP7.67□□□□□ -1.18
SDCBP-206ENST00000519115 XAB2Q9HCS7 855 aaKnown RBP7.67□□□□□ -1.18
SDCBP-206ENST00000519115 VPS45Q9NRW7 570 aa7.67□□□□□ -1.18
SDCBP-206ENST00000519115 TMEM74BQ9NUR3 256 aa7.67□□□□□ -1.18
SDCBP-206ENST00000519115 SAE1Q9UBE0 346 aaPredicted RBP7.67□□□□□ -1.18
SDCBP-206ENST00000519115 UBA2Q9UBT2 640 aaPredicted RBP7.67□□□□□ -1.18
SDCBP-206ENST00000519115 FETUBQ9UGM5 382 aa7.67□□□□□ -1.18
SDCBP-206ENST00000519115 PPM1HQ9ULR3 514 aa7.67□□□□□ -1.18
SDCBP-206ENST00000519115 NCKAP1Q9Y2A7 1128 aa7.67□□□□□ -1.18
SDCBP-206ENST00000519115 AAR2Q9Y312 384 aaKnown RBP7.67□□□□□ -1.18
SDCBP-206ENST00000519115 SNX24Q9Y343 169 aa7.67□□□□□ -1.18
SDCBP-206ENST00000519115 PCDHGA5Q9Y5G8 931 aa7.67□□□□□ -1.18
SDCBP-206ENST00000519115 WASF2Q9Y6W5 498 aa7.67□□□□□ -1.18
SDCBP-206ENST00000519115 TDRD6O60522 2096 aaKnown RBP7.67□□□□□ -1.18
SDCBP-206ENST00000519115 CNOT1A5YKK6 2376 aaKnown RBP7.67□□□□□ -1.18
SDCBP-206ENST00000519115 SPTBN2O15020 2390 aa7.66□□□□□ -1.18
SDCBP-206ENST00000519115 C1QTNF3-AMACRE9PGA6 284 aa7.66□□□□□ -1.18
SDCBP-206ENST00000519115 KCNN4O15554 427 aa7.66□□□□□ -1.18
SDCBP-206ENST00000519115 MAFKO60675 156 aa7.66□□□□□ -1.18
SDCBP-206ENST00000519115 PRAMEF11O60813 436 aa7.66□□□□□ -1.18
SDCBP-206ENST00000519115 LRP3O75074 770 aa7.66□□□□□ -1.18
SDCBP-206ENST00000519115 LEFTY1O75610 366 aa7.66□□□□□ -1.18
SDCBP-206ENST00000519115 SUN1O94901 812 aa7.66□□□□□ -1.18
SDCBP-206ENST00000519115 FSBPO95073 299 aa7.66□□□□□ -1.18
SDCBP-206ENST00000519115 MAP3K6O95382 1288 aa7.66□□□□□ -1.18
SDCBP-206ENST00000519115 IFNB1P01574 187 aa7.66□□□□□ -1.18
SDCBP-206ENST00000519115 EPOP01588 193 aa7.66□□□□□ -1.18
SDCBP-206ENST00000519115 CFIP05156 583 aa7.66□□□□□ -1.18
SDCBP-206ENST00000519115 ABHD2P08910 425 aa7.66□□□□□ -1.18
SDCBP-206ENST00000519115 NUDT17P0C025 328 aa7.66□□□□□ -1.18
SDCBP-206ENST00000519115 CCNB1P14635 433 aa7.66□□□□□ -1.18
SDCBP-206ENST00000519115 RBL1P28749 1068 aa7.66□□□□□ -1.18
SDCBP-206ENST00000519115 ITGA8P53708 1063 aa7.66□□□□□ -1.18
SDCBP-206ENST00000519115 ADPRHP54922 357 aa7.66□□□□□ -1.18
SDCBP-206ENST00000519115 ARL4CP56559 192 aa7.66□□□□□ -1.18
SDCBP-206ENST00000519115 RHOAP61586 193 aa7.66□□□□□ -1.18
SDCBP-206ENST00000519115 DYNLT1P63172 113 aa7.66□□□□□ -1.18
SDCBP-206ENST00000519115 NSUN2Q08J23 767 aaKnown RBP eCLIP7.66□□□□□ -1.18
SDCBP-206ENST00000519115 WASHC5Q12768 1159 aa7.66□□□□□ -1.18
SDCBP-206ENST00000519115 FRG1Q14331 258 aaKnown RBP7.66□□□□□ -1.18
SDCBP-206ENST00000519115 KCNJ11Q14654 390 aa7.66□□□□□ -1.18
SDCBP-206ENST00000519115 CASP8Q14790 479 aa7.66□□□□□ -1.18
SDCBP-206ENST00000519115 CSRP2Q16527 193 aa7.66□□□□□ -1.18
SDCBP-206ENST00000519115 AASDHQ4L235 1098 aaPredicted RBP7.66□□□□□ -1.18
SDCBP-206ENST00000519115 CARD16Q5EG05 197 aa7.66□□□□□ -1.18
SDCBP-206ENST00000519115 ARSIQ5FYB1 569 aa7.66□□□□□ -1.18
SDCBP-206ENST00000519115 PLA2G2CQ5R387 149 aa7.66□□□□□ -1.18
SDCBP-206ENST00000519115 ANKRD20A2Q5SQ80 823 aa7.66□□□□□ -1.18
SDCBP-206ENST00000519115 ANKRD20A1Q5TYW2 823 aa7.66□□□□□ -1.18
SDCBP-206ENST00000519115 AGBL4Q5VU57 503 aa7.66□□□□□ -1.18
SDCBP-206ENST00000519115 ANKRD20A3Q5VUR7 823 aa7.66□□□□□ -1.18
SDCBP-206ENST00000519115 FAM46CQ5VWP2 391 aa7.66□□□□□ -1.18
SDCBP-206ENST00000519115 ALG1LQ6GMV1 187 aa7.66□□□□□ -1.18
SDCBP-206ENST00000519115 NCEH1Q6PIU2 408 aa7.66□□□□□ -1.18
SDCBP-206ENST00000519115 ZDHHC24Q6UX98 284 aa7.66□□□□□ -1.18
SDCBP-206ENST00000519115 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP7.66□□□□□ -1.18
SDCBP-206ENST00000519115 ARHGEF18Q6ZSZ5 1173 aa7.66□□□□□ -1.18
SDCBP-206ENST00000519115 USP30Q70CQ3 517 aa7.66□□□□□ -1.18
SDCBP-206ENST00000519115 CENPUQ71F23 418 aa7.66□□□□□ -1.18
SDCBP-206ENST00000519115 TMC3Q7Z5M5 1100 aa7.66□□□□□ -1.18
SDCBP-206ENST00000519115 LINC00523Q86TU6 105 aa7.66□□□□□ -1.18
SDCBP-206ENST00000519115 ZC3H18Q86VM9 953 aaKnown RBP7.66□□□□□ -1.18
SDCBP-206ENST00000519115 SYT12Q8IV01 421 aa7.66□□□□□ -1.18
SDCBP-206ENST00000519115 OR14C36Q8NHC7 312 aa7.66□□□□□ -1.18
SDCBP-206ENST00000519115 NSMCE1Q8WV22 266 aa7.66□□□□□ -1.18
SDCBP-206ENST00000519115 ARRDC3Q96B67 414 aa7.66□□□□□ -1.18
SDCBP-206ENST00000519115 ZNF419Q96HQ0 510 aaPredicted RBP7.66□□□□□ -1.18
SDCBP-206ENST00000519115 C19orf43Q9BQ61 176 aa7.66□□□□□ -1.18
SDCBP-206ENST00000519115 HEPHQ9BQS7 1158 aa7.66□□□□□ -1.18
SDCBP-206ENST00000519115 MIR1-1HGQ9H1L0 117 aa7.66□□□□□ -1.18
SDCBP-206ENST00000519115 SP110Q9HB58 689 aa7.66□□□□□ -1.18
SDCBP-206ENST00000519115 PDFQ9HBH1 243 aa7.66□□□□□ -1.18
SDCBP-206ENST00000519115 MED4Q9NPJ6 270 aa7.66□□□□□ -1.18
SDCBP-206ENST00000519115 FSCN3Q9NQT6 498 aa7.66□□□□□ -1.18
SDCBP-206ENST00000519115 RXFP3Q9NSD7 469 aa7.66□□□□□ -1.18
SDCBP-206ENST00000519115 FAM53CQ9NYF3 392 aa7.66□□□□□ -1.18
SDCBP-206ENST00000519115 HECAQ9UBI9 543 aaPredicted RBP7.66□□□□□ -1.18
SDCBP-206ENST00000519115 LHX3Q9UBR4 397 aa7.66□□□□□ -1.18
SDCBP-206ENST00000519115 IL36AQ9UHA7 158 aa7.66□□□□□ -1.18
SDCBP-206ENST00000519115 EIF2B4Q9UI10 523 aaKnown RBP7.66□□□□□ -1.18
SDCBP-206ENST00000519115 PILRBQ9UKJ0 227 aa7.66□□□□□ -1.18
SDCBP-206ENST00000519115 FZD4Q9ULV1 537 aa7.66□□□□□ -1.18
SDCBP-206ENST00000519115 SCML1Q9UN30 329 aa7.66□□□□□ -1.18
SDCBP-206ENST00000519115 SLCO1B1Q9Y6L6 691 aa7.66□□□□□ -1.18
SDCBP-206ENST00000519115 LNP1A1A4G5 178 aa7.65□□□□□ -1.18
SDCBP-206ENST00000519115 A6NNZ2 444 aa7.65□□□□□ -1.18
SDCBP-206ENST00000519115 METTL12A8MUP2 240 aa7.65□□□□□ -1.18
SDCBP-206ENST00000519115 INSIG1O15503 277 aa7.65□□□□□ -1.18
SDCBP-206ENST00000519115 OPA1O60313 960 aa7.65□□□□□ -1.18
SDCBP-206ENST00000519115 GDF9O60383 454 aa7.65□□□□□ -1.18
SDCBP-206ENST00000519115 ANXA9O76027 345 aa7.65□□□□□ -1.18
SDCBP-206ENST00000519115 TTC4O95801 387 aa7.65□□□□□ -1.18
SDCBP-206ENST00000519115 IGSF6O95976 241 aa7.65□□□□□ -1.18
SDCBP-206ENST00000519115 GSRP00390 522 aa7.65□□□□□ -1.18
SDCBP-206ENST00000519115 PRNPP04156 253 aa7.65□□□□□ -1.18
SDCBP-206ENST00000519115 UGT2B4P06133 528 aa7.65□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms