RNA–Protein interactions for RNA: ENST00000518931.1

SQLE-203, Transcript of squalene epoxidase, humanhuman

TSL 4

Gene SQLE, Length 554 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQLE-203ENST00000518931 AWAT1Q58HT5 328 aa6.09□□□□□ -1.43
SQLE-203ENST00000518931 ZNF805Q5CZA5 627 aa6.09□□□□□ -1.43
SQLE-203ENST00000518931 FAM90A2PQ658T7 463 aa6.09□□□□□ -1.43
SQLE-203ENST00000518931 MEX3BQ6ZN04 569 aaKnown RBP6.09□□□□□ -1.43
SQLE-203ENST00000518931 INTS8Q75QN2 995 aaKnown RBP6.09□□□□□ -1.43
SQLE-203ENST00000518931 RABEPKQ7Z6M1 372 aa6.09□□□□□ -1.43
SQLE-203ENST00000518931 ZSCAN2Q7Z7L9 614 aaPredicted RBP6.09□□□□□ -1.43
SQLE-203ENST00000518931 CTAGE6Q86UF2 777 aa6.09□□□□□ -1.43
SQLE-203ENST00000518931 CTAGE4Q8IX94 777 aa6.09□□□□□ -1.43
SQLE-203ENST00000518931 FIBINQ8TAL6 211 aa6.09□□□□□ -1.43
SQLE-203ENST00000518931 KCNG4Q8TDN1 519 aa6.09□□□□□ -1.43
SQLE-203ENST00000518931 SEPT1Q8WYJ6 367 aa6.09□□□□□ -1.43
SQLE-203ENST00000518931 NRBF2Q96F24 287 aa6.09□□□□□ -1.43
SQLE-203ENST00000518931 PDLIM5Q96HC4 596 aaKnown RBP6.09□□□□□ -1.43
SQLE-203ENST00000518931 KAZALD1Q96I82 304 aa6.09□□□□□ -1.43
SQLE-203ENST00000518931 CNOT6LQ96LI5 555 aaKnown RBP6.09□□□□□ -1.43
SQLE-203ENST00000518931 CTAGE1Q96RT6 745 aa6.09□□□□□ -1.43
SQLE-203ENST00000518931 EIF3CQ99613 913 aaKnown RBP6.09□□□□□ -1.43
SQLE-203ENST00000518931 NUDT22Q9BRQ3 303 aa6.09□□□□□ -1.43
SQLE-203ENST00000518931 ACPTQ9BZG2 426 aa6.09□□□□□ -1.43
SQLE-203ENST00000518931 IQCGQ9H095 443 aaKnown RBP6.09□□□□□ -1.43
SQLE-203ENST00000518931 PABPC3Q9H361 631 aaKnown RBP6.09□□□□□ -1.43
SQLE-203ENST00000518931 SMARCAD1Q9H4L7 1026 aa6.09□□□□□ -1.43
SQLE-203ENST00000518931 IL1RAPL2Q9NP60 686 aa6.09□□□□□ -1.43
SQLE-203ENST00000518931 GAR1Q9NY12 217 aaKnown RBP6.09□□□□□ -1.43
SQLE-203ENST00000518931 TEKT2Q9UIF3 430 aa6.09□□□□□ -1.43
SQLE-203ENST00000518931 FZD4Q9ULV1 537 aa6.09□□□□□ -1.43
SQLE-203ENST00000518931 SCAF8Q9UPN6 1271 aaKnown RBP6.09□□□□□ -1.43
SQLE-203ENST00000518931 LIPT1Q9Y234 373 aa6.09□□□□□ -1.43
SQLE-203ENST00000518931 PCDHB2Q9Y5E7 798 aa6.09□□□□□ -1.43
SQLE-203ENST00000518931 PCSK5Q92824 1860 aa6.09□□□□□ -1.44
SQLE-203ENST00000518931 ATP8B3O60423 1300 aa6.08□□□□□ -1.44
SQLE-203ENST00000518931 FCHO1O14526 889 aa6.08□□□□□ -1.44
SQLE-203ENST00000518931 MAGEB3O15480 346 aa6.08□□□□□ -1.44
SQLE-203ENST00000518931 NMT2O60551 498 aa6.08□□□□□ -1.44
SQLE-203ENST00000518931 KRT38O76015 456 aa6.08□□□□□ -1.44
SQLE-203ENST00000518931 F9P00740 461 aa6.08□□□□□ -1.44
SQLE-203ENST00000518931 TPM1P09493 284 aa6.08□□□□□ -1.44
SQLE-203ENST00000518931 MYBL1P10243 752 aa6.08□□□□□ -1.44
SQLE-203ENST00000518931 SFPQP23246 707 aaKnown RBP eCLIP6.08□□□□□ -1.44
SQLE-203ENST00000518931 MPGP29372 298 aa6.08□□□□□ -1.44
SQLE-203ENST00000518931 MAGEA8P43361 318 aa6.08□□□□□ -1.44
SQLE-203ENST00000518931 PIP4K2AP48426 406 aaPredicted RBP6.08□□□□□ -1.44
SQLE-203ENST00000518931 LUMP51884 338 aaPredicted RBP6.08□□□□□ -1.44
SQLE-203ENST00000518931 ACTR1AP61163 376 aa6.08□□□□□ -1.44
SQLE-203ENST00000518931 RELQ04864 619 aaPredicted RBP6.08□□□□□ -1.44
SQLE-203ENST00000518931 RUNX1T1Q06455 604 aa6.08□□□□□ -1.44
SQLE-203ENST00000518931 SRSF4Q08170 494 aaKnown RBP6.08□□□□□ -1.44
SQLE-203ENST00000518931 CCDC173Q0VFZ6 552 aa6.08□□□□□ -1.44
SQLE-203ENST00000518931 TNFAIP1Q13829 316 aa6.08□□□□□ -1.44
SQLE-203ENST00000518931 LARS2Q15031 903 aaKnown RBP6.08□□□□□ -1.44
SQLE-203ENST00000518931 KCNT1Q5JUK3 1230 aa6.08□□□□□ -1.44
SQLE-203ENST00000518931 C12orf60Q5U649 245 aa6.08□□□□□ -1.44
SQLE-203ENST00000518931 CCDC144NLQ6NUI1 221 aa6.08□□□□□ -1.44
SQLE-203ENST00000518931 TMEM154Q6P9G4 183 aa6.08□□□□□ -1.44
SQLE-203ENST00000518931 RANBP10Q6VN20 620 aa6.08□□□□□ -1.44
SQLE-203ENST00000518931 ZNF66Q6ZN08 573 aa6.08□□□□□ -1.44
SQLE-203ENST00000518931 PIK3AP1Q6ZUJ8 805 aa6.08□□□□□ -1.44
SQLE-203ENST00000518931 DENND5BQ6ZUT9 1274 aa6.08□□□□□ -1.44
SQLE-203ENST00000518931 H1FNTQ75WM6 255 aaPredicted RBP6.08□□□□□ -1.44
SQLE-203ENST00000518931 LRRC8DQ7L1W4 858 aa6.08□□□□□ -1.44
SQLE-203ENST00000518931 CACNA2D4Q7Z3S7 1137 aa6.08□□□□□ -1.44
SQLE-203ENST00000518931 ANKS1BQ7Z6G8 1248 aa6.08□□□□□ -1.44
SQLE-203ENST00000518931 MRPL43Q8N983 215 aaKnown RBP6.08□□□□□ -1.44
SQLE-203ENST00000518931 POGLUT1Q8NBL1 392 aa6.08□□□□□ -1.44
SQLE-203ENST00000518931 CNNM3Q8NE01 707 aa6.08□□□□□ -1.44
SQLE-203ENST00000518931 TNIP2Q8NFZ5 429 aa6.08□□□□□ -1.44
SQLE-203ENST00000518931 SCFD2Q8WU76 684 aa6.08□□□□□ -1.44
SQLE-203ENST00000518931 C5orf34Q96MH7 638 aa6.08□□□□□ -1.44
SQLE-203ENST00000518931 ADGRE3Q9BY15 652 aa6.08□□□□□ -1.44
SQLE-203ENST00000518931 FTOQ9C0B1 505 aaKnown RBP eCLIP6.08□□□□□ -1.44
SQLE-203ENST00000518931 NYXQ9GZU5 481 aa6.08□□□□□ -1.44
SQLE-203ENST00000518931 ABCG8Q9H221 673 aa6.08□□□□□ -1.44
SQLE-203ENST00000518931 OPA3Q9H6K4 179 aa6.08□□□□□ -1.44
SQLE-203ENST00000518931 VCPKMTQ9H867 229 aa6.08□□□□□ -1.44
SQLE-203ENST00000518931 CRLF2Q9HC73 371 aa6.08□□□□□ -1.44
SQLE-203ENST00000518931 FSCN3Q9NQT6 498 aa6.08□□□□□ -1.44
SQLE-203ENST00000518931 SERINC1Q9NRX5 453 aa6.08□□□□□ -1.44
SQLE-203ENST00000518931 ADARB2Q9NS39 739 aaKnown RBP6.08□□□□□ -1.44
SQLE-203ENST00000518931 DNAJB9Q9UBS3 223 aa6.08□□□□□ -1.44
SQLE-203ENST00000518931 CHTOPQ9Y3Y2 248 aaKnown RBP6.08□□□□□ -1.44
SQLE-203ENST00000518931 MROH5Q6ZUA9 1318 aa6.07□□□□□ -1.44
SQLE-203ENST00000518931 KIF16BQ96L93 1317 aa6.07□□□□□ -1.44
SQLE-203ENST00000518931 TMEM232C9JQI7 657 aa6.07□□□□□ -1.44
SQLE-203ENST00000518931 O00370 1275 aa6.07□□□□□ -1.44
SQLE-203ENST00000518931 SPOPO43791 374 aa6.07□□□□□ -1.44
SQLE-203ENST00000518931 TAF5LO75529 589 aa6.07□□□□□ -1.44
SQLE-203ENST00000518931 LATS1O95835 1130 aa6.07□□□□□ -1.44
SQLE-203ENST00000518931 GLP2RO95838 553 aa6.07□□□□□ -1.44
SQLE-203ENST00000518931 IFNB1P01574 187 aa6.07□□□□□ -1.44
SQLE-203ENST00000518931 MBPP02686 304 aaPredicted RBP6.07□□□□□ -1.44
SQLE-203ENST00000518931 SAT1P21673 171 aa6.07□□□□□ -1.44
SQLE-203ENST00000518931 FBLP22087 321 aaKnown RBP6.07□□□□□ -1.44
SQLE-203ENST00000518931 GDI1P31150 447 aa6.07□□□□□ -1.44
SQLE-203ENST00000518931 CIITAP33076 1130 aa6.07□□□□□ -1.44
SQLE-203ENST00000518931 PGM1P36871 562 aa6.07□□□□□ -1.44
SQLE-203ENST00000518931 CPA2P48052 419 aa6.07□□□□□ -1.44
SQLE-203ENST00000518931 ZNF81P51508 661 aa6.07□□□□□ -1.44
SQLE-203ENST00000518931 RPS3AP61247 264 aaKnown RBP6.07□□□□□ -1.44
SQLE-203ENST00000518931 RPP30P78346 268 aaKnown RBP6.07□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms