RNA–Protein interactions for RNA: ENST00000518604.1

SQLE-202, Transcript of squalene epoxidase, humanhuman

TSL 2

Gene SQLE, Length 743 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQLE-202ENST00000518604 TMEM51Q9NW97 253 aa4.63□□□□□ -1.67
SQLE-202ENST00000518604 HCFC1R1Q9NWW0 138 aa4.63□□□□□ -1.67
SQLE-202ENST00000518604 RNF7Q9UBF6 113 aa4.63□□□□□ -1.67
SQLE-202ENST00000518604 FZD10Q9ULW2 581 aa4.63□□□□□ -1.67
SQLE-202ENST00000518604 PAM16Q9Y3D7 125 aa4.63□□□□□ -1.67
SQLE-202ENST00000518604 SETD1BQ9UPS6 1966 aaKnown RBP4.62□□□□□ -1.67
SQLE-202ENST00000518604 A0A1B0GVM2 712 aa4.62□□□□□ -1.67
SQLE-202ENST00000518604 FAM90A10PA6NDY2 464 aa4.62□□□□□ -1.67
SQLE-202ENST00000518604 LIPT2A6NK58 231 aa4.62□□□□□ -1.67
SQLE-202ENST00000518604 BECN2A8MW95 431 aa4.62□□□□□ -1.67
SQLE-202ENST00000518604 KDM4EB2RXH2 506 aaPredicted RBP4.62□□□□□ -1.67
SQLE-202ENST00000518604 TNFRSF13BO14836 293 aaPredicted RBP4.62□□□□□ -1.67
SQLE-202ENST00000518604 BCAT2O15382 392 aaPredicted RBP4.62□□□□□ -1.67
SQLE-202ENST00000518604 RGS14O43566 566 aa4.62□□□□□ -1.67
SQLE-202ENST00000518604 TIPRLO75663 272 aa4.62□□□□□ -1.67
SQLE-202ENST00000518604 IPO7O95373 1038 aaKnown RBP4.62□□□□□ -1.67
SQLE-202ENST00000518604 DDX5P17844 614 aaKnown RBP4.62□□□□□ -1.67
SQLE-202ENST00000518604 SCP2P22307 547 aa4.62□□□□□ -1.67
SQLE-202ENST00000518604 NUDT6P53370 316 aa4.62□□□□□ -1.67
SQLE-202ENST00000518604 DSC1Q08554 894 aa4.62□□□□□ -1.67
SQLE-202ENST00000518604 NIPAL4Q0D2K0 466 aa4.62□□□□□ -1.67
SQLE-202ENST00000518604 TRAF2Q12933 501 aa4.62□□□□□ -1.67
SQLE-202ENST00000518604 GPS2Q13227 327 aa4.62□□□□□ -1.67
SQLE-202ENST00000518604 DRAP1Q14919 205 aaPredicted RBP4.62□□□□□ -1.67
SQLE-202ENST00000518604 C6orf141Q5SZD1 244 aa4.62□□□□□ -1.67
SQLE-202ENST00000518604 WDR78Q5VTH9 848 aa4.62□□□□□ -1.67
SQLE-202ENST00000518604 LRRC8EQ6NSJ5 796 aa4.62□□□□□ -1.67
SQLE-202ENST00000518604 TSSK4Q6SA08 328 aa4.62□□□□□ -1.67
SQLE-202ENST00000518604 DLK2Q6UY11 383 aa4.62□□□□□ -1.67
SQLE-202ENST00000518604 WDR63Q8IWG1 891 aa4.62□□□□□ -1.67
SQLE-202ENST00000518604 ARHGAP12Q8IWW6 846 aa4.62□□□□□ -1.67
SQLE-202ENST00000518604 PDILTQ8N807 584 aa4.62□□□□□ -1.67
SQLE-202ENST00000518604 AGBL3Q8NEM8 1001 aa4.62□□□□□ -1.67
SQLE-202ENST00000518604 GPT2Q8TD30 523 aa4.62□□□□□ -1.67
SQLE-202ENST00000518604 CREB3L4Q8TEY5 395 aa4.62□□□□□ -1.67
SQLE-202ENST00000518604 PERPQ96FX8 193 aa4.62□□□□□ -1.67
SQLE-202ENST00000518604 SLC41A2Q96JW4 573 aa4.62□□□□□ -1.67
SQLE-202ENST00000518604 TMEM68Q96MH6 324 aa4.62□□□□□ -1.67
SQLE-202ENST00000518604 FAM110AQ9BQ89 295 aa4.62□□□□□ -1.67
SQLE-202ENST00000518604 ITPAQ9BY32 194 aa4.62□□□□□ -1.67
SQLE-202ENST00000518604 DCLK3Q9C098 648 aa4.62□□□□□ -1.67
SQLE-202ENST00000518604 CLK4Q9HAZ1 481 aaKnown RBP4.62□□□□□ -1.67
SQLE-202ENST00000518604 SCPEP1Q9HB40 452 aa4.62□□□□□ -1.67
SQLE-202ENST00000518604 EIF2B3Q9NR50 452 aaKnown RBP4.62□□□□□ -1.67
SQLE-202ENST00000518604 MAP3K20Q9NYL2 800 aaKnown RBP4.62□□□□□ -1.67
SQLE-202ENST00000518604 FBXO2Q9UK22 296 aaPredicted RBP4.62□□□□□ -1.67
SQLE-202ENST00000518604 IGHV4-28A0A0C4DH34 117 aa4.61□□□□□ -1.67
SQLE-202ENST00000518604 FAM237AA0A1B0GTK4 181 aa4.61□□□□□ -1.67
SQLE-202ENST00000518604 FAM237BA0A1B0GVD1 139 aa4.61□□□□□ -1.67
SQLE-202ENST00000518604 GTPBP1O00178 669 aaKnown RBP4.61□□□□□ -1.67
SQLE-202ENST00000518604 PTP4A3O75365 173 aa4.61□□□□□ -1.67
SQLE-202ENST00000518604 VNN2O95498 520 aa4.61□□□□□ -1.67
SQLE-202ENST00000518604 CDC25AP30304 524 aa4.61□□□□□ -1.67
SQLE-202ENST00000518604 MLH1P40692 756 aa4.61□□□□□ -1.67
SQLE-202ENST00000518604 MYBPC2Q14324 1141 aa4.61□□□□□ -1.67
SQLE-202ENST00000518604 FRG1Q14331 258 aaKnown RBP4.61□□□□□ -1.67
SQLE-202ENST00000518604 CRYMQ14894 314 aa4.61□□□□□ -1.67
SQLE-202ENST00000518604 ODF3L2Q3SX64 289 aa4.61□□□□□ -1.67
SQLE-202ENST00000518604 SPATA1Q5VX52 437 aa4.61□□□□□ -1.67
SQLE-202ENST00000518604 CYP20A1Q6UW02 462 aa4.61□□□□□ -1.67
SQLE-202ENST00000518604 BRINP3Q76B58 766 aa4.61□□□□□ -1.67
SQLE-202ENST00000518604 NOXA1Q86UR1 476 aa4.61□□□□□ -1.67
SQLE-202ENST00000518604 RPAP2Q8IXW5 612 aaPredicted RBP4.61□□□□□ -1.67
SQLE-202ENST00000518604 HUS1BQ8NHY5 278 aa4.61□□□□□ -1.67
SQLE-202ENST00000518604 NSMCE1Q8WV22 266 aa4.61□□□□□ -1.67
SQLE-202ENST00000518604 PABPC5Q96DU9 382 aaKnown RBP4.61□□□□□ -1.67
SQLE-202ENST00000518604 MMABQ96EY8 250 aaPredicted RBP4.61□□□□□ -1.67
SQLE-202ENST00000518604 LRFN5Q96NI6 719 aa4.61□□□□□ -1.67
SQLE-202ENST00000518604 KIF9Q9HAQ2 790 aa4.61□□□□□ -1.67
SQLE-202ENST00000518604 OR6C3Q9NZP0 311 aa4.61□□□□□ -1.67
SQLE-202ENST00000518604 ABI3Q9P2A4 366 aa4.61□□□□□ -1.67
SQLE-202ENST00000518604 MKLN1Q9UL63 735 aa4.61□□□□□ -1.67
SQLE-202ENST00000518604 CEPT1Q9Y6K0 416 aa4.61□□□□□ -1.67
SQLE-202ENST00000518604 A0A1W2PQF6 199 aa4.6□□□□□ -1.67
SQLE-202ENST00000518604 TMEM202A6NGA9 273 aa4.6□□□□□ -1.67
SQLE-202ENST00000518604 CD8B2A6NJW9 211 aa4.6□□□□□ -1.67
SQLE-202ENST00000518604 SCAMP1O15126 338 aa4.6□□□□□ -1.67
SQLE-202ENST00000518604 BMP15O95972 392 aa4.6□□□□□ -1.67
SQLE-202ENST00000518604 HOXC6P09630 235 aa4.6□□□□□ -1.67
SQLE-202ENST00000518604 ZNF182P17025 639 aaPredicted RBP4.6□□□□□ -1.67
SQLE-202ENST00000518604 PBX3P40426 434 aa4.6□□□□□ -1.67
SQLE-202ENST00000518604 RFX5P48382 616 aaPredicted RBP4.6□□□□□ -1.67
SQLE-202ENST00000518604 AMTP48728 403 aa4.6□□□□□ -1.67
SQLE-202ENST00000518604 PMS2P54278 862 aa4.6□□□□□ -1.67
SQLE-202ENST00000518604 CTTNQ14247 550 aaKnown RBP4.6□□□□□ -1.67
SQLE-202ENST00000518604 ALG11Q2TAA5 492 aa4.6□□□□□ -1.67
SQLE-202ENST00000518604 TDRD12Q587J7 1177 aaKnown RBP4.6□□□□□ -1.67
SQLE-202ENST00000518604 SLC45A4Q5BKX6 768 aa4.6□□□□□ -1.67
SQLE-202ENST00000518604 PPP6R3Q5H9R7 873 aaPredicted RBP4.6□□□□□ -1.67
SQLE-202ENST00000518604 ITPRIPL1Q6GPH6 555 aa4.6□□□□□ -1.67
SQLE-202ENST00000518604 TTI2Q6NXR4 508 aa4.6□□□□□ -1.67
SQLE-202ENST00000518604 TMEM154Q6P9G4 183 aa4.6□□□□□ -1.67
SQLE-202ENST00000518604 LCTLQ6UWM7 567 aa4.6□□□□□ -1.67
SQLE-202ENST00000518604 CCDC129Q6ZRS4 1044 aa4.6□□□□□ -1.67
SQLE-202ENST00000518604 IKBIPQ70UQ0 350 aa4.6□□□□□ -1.67
SQLE-202ENST00000518604 SLC35F3Q8IY50 421 aa4.6□□□□□ -1.67
SQLE-202ENST00000518604 AADATQ8N5Z0 425 aa4.6□□□□□ -1.67
SQLE-202ENST00000518604 ZBTB2Q8N680 514 aa4.6□□□□□ -1.67
SQLE-202ENST00000518604 MIGA1Q8NAN2 632 aa4.6□□□□□ -1.67
SQLE-202ENST00000518604 SCARB1Q8WTV0 552 aa4.6□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms