RNA–Protein interactions for RNA: ENST00000516991.1

SCARNA20.5-201, small Cajal body-specific RNA 20, humanhuman

BASIC

Gene SCARNA20, Length 142 nt, Biotype scaRNA, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA20.5-201ENST00000516991 INHBCP55103 352 aa14.69□□□□□ -0.06
SCARNA20.5-201ENST00000516991 POLR2LP62875 67 aaKnown RBP14.69□□□□□ -0.06
SCARNA20.5-201ENST00000516991 OGDHQ02218 1023 aa14.69□□□□□ -0.06
SCARNA20.5-201ENST00000516991 RD3Q7Z3Z2 195 aa14.69□□□□□ -0.06
SCARNA20.5-201ENST00000516991 CAMK1DQ8IU85 385 aa14.69□□□□□ -0.06
SCARNA20.5-201ENST00000516991 TTC9Q92623 222 aa14.69□□□□□ -0.06
SCARNA20.5-201ENST00000516991 ECHDC3Q96DC8 303 aa14.69□□□□□ -0.06
SCARNA20.5-201ENST00000516991 PDXPQ96GD0 296 aa14.69□□□□□ -0.06
SCARNA20.5-201ENST00000516991 CELF6Q96J87 481 aaKnown RBP14.69□□□□□ -0.06
SCARNA20.5-201ENST00000516991 DHX35Q9H5Z1 703 aaKnown RBP14.69□□□□□ -0.06
SCARNA20.5-201ENST00000516991 GPATCH2LQ9NWQ4 482 aa14.69□□□□□ -0.06
SCARNA20.5-201ENST00000516991 MYO6Q9UM54 1294 aa14.69□□□□□ -0.06
SCARNA20.5-201ENST00000516991 PCDHGA7Q9Y5G6 932 aa14.69□□□□□ -0.06
SCARNA20.5-201ENST00000516991 FLNBO75369 2602 aaKnown RBP14.68□□□□□ -0.06
SCARNA20.5-201ENST00000516991 TNFRSF10CO14798 259 aa14.68□□□□□ -0.06
SCARNA20.5-201ENST00000516991 DAPK3O43293 454 aa14.68□□□□□ -0.06
SCARNA20.5-201ENST00000516991 BUB1BO60566 1050 aaPredicted RBP14.68□□□□□ -0.06
SCARNA20.5-201ENST00000516991 RNF8O76064 485 aa14.68□□□□□ -0.06
SCARNA20.5-201ENST00000516991 RPLP0P05388 317 aaKnown RBP14.68□□□□□ -0.06
SCARNA20.5-201ENST00000516991 HOXC4P09017 264 aaPredicted RBP14.68□□□□□ -0.06
SCARNA20.5-201ENST00000516991 CDK11BP21127 795 aaKnown RBP14.68□□□□□ -0.06
SCARNA20.5-201ENST00000516991 PSMA2P25787 234 aa14.68□□□□□ -0.06
SCARNA20.5-201ENST00000516991 PAPOLAP51003 745 aaKnown RBP14.68□□□□□ -0.06
SCARNA20.5-201ENST00000516991 AP1S1P61966 158 aa14.68□□□□□ -0.06
SCARNA20.5-201ENST00000516991 BCL2L1Q07817 233 aa14.68□□□□□ -0.06
SCARNA20.5-201ENST00000516991 CLN3Q13286 438 aa14.68□□□□□ -0.06
SCARNA20.5-201ENST00000516991 AFMIDQ63HM1 303 aa14.68□□□□□ -0.06
SCARNA20.5-201ENST00000516991 CCDC81Q6ZN84 652 aa14.68□□□□□ -0.06
SCARNA20.5-201ENST00000516991 RAB11FIP2Q7L804 512 aa14.68□□□□□ -0.06
SCARNA20.5-201ENST00000516991 ZSWIM9Q86XI8 627 aa14.68□□□□□ -0.06
SCARNA20.5-201ENST00000516991 CCNJLQ8IV13 435 aa14.68□□□□□ -0.06
SCARNA20.5-201ENST00000516991 PSTKQ8IV42 348 aaKnown RBP14.68□□□□□ -0.06
SCARNA20.5-201ENST00000516991 FBXO39Q8N4B4 442 aa14.68□□□□□ -0.06
SCARNA20.5-201ENST00000516991 TSEN2Q8NCE0 465 aaKnown RBP14.68□□□□□ -0.06
SCARNA20.5-201ENST00000516991 GPR156Q8NFN8 814 aa14.68□□□□□ -0.06
SCARNA20.5-201ENST00000516991 OR56A4Q8NGH8 313 aa14.68□□□□□ -0.06
SCARNA20.5-201ENST00000516991 TMEM159Q96B96 161 aa14.68□□□□□ -0.06
SCARNA20.5-201ENST00000516991 SNRNP25Q9BV90 132 aaKnown RBP14.68□□□□□ -0.06
SCARNA20.5-201ENST00000516991 SLC39A8Q9C0K1 460 aa14.68□□□□□ -0.06
SCARNA20.5-201ENST00000516991 ACSL6Q9UKU0 697 aa14.68□□□□□ -0.06
SCARNA20.5-201ENST00000516991 ATXN7L1Q9ULK2 861 aaPredicted RBP14.68□□□□□ -0.06
SCARNA20.5-201ENST00000516991 UNC13CQ8NB66 2214 aa14.68□□□□□ -0.06
SCARNA20.5-201ENST00000516991 A0A1W2PQ67 120 aa14.67□□□□□ -0.06
SCARNA20.5-201ENST00000516991 PMS2P1A4D2B8 440 aa14.67□□□□□ -0.06
SCARNA20.5-201ENST00000516991 PDE2AO00408 941 aaPredicted RBP14.67□□□□□ -0.06
SCARNA20.5-201ENST00000516991 RECQL5O94762 991 aaPredicted RBP14.67□□□□□ -0.06
SCARNA20.5-201ENST00000516991 PNLIPP16233 465 aa14.67□□□□□ -0.06
SCARNA20.5-201ENST00000516991 GLB1P16278 677 aa14.67□□□□□ -0.06
SCARNA20.5-201ENST00000516991 TNFAIP3P21580 790 aa14.67□□□□□ -0.06
SCARNA20.5-201ENST00000516991 RGRP47804 291 aa14.67□□□□□ -0.06
SCARNA20.5-201ENST00000516991 RENBPP51606 427 aa14.67□□□□□ -0.06
SCARNA20.5-201ENST00000516991 CCL7P80098 99 aa14.67□□□□□ -0.06
SCARNA20.5-201ENST00000516991 IL10RBQ08334 325 aa14.67□□□□□ -0.06
SCARNA20.5-201ENST00000516991 NSUN2Q08J23 767 aaKnown RBP eCLIP14.67□□□□□ -0.06
SCARNA20.5-201ENST00000516991 RALGDSQ12967 914 aa14.67□□□□□ -0.06
SCARNA20.5-201ENST00000516991 MAMLD1Q13495 774 aa14.67□□□□□ -0.06
SCARNA20.5-201ENST00000516991 TSR1Q2NL82 804 aaKnown RBP14.67□□□□□ -0.06
SCARNA20.5-201ENST00000516991 CERCAMQ5T4B2 595 aa14.67□□□□□ -0.06
SCARNA20.5-201ENST00000516991 ERMARDQ5T6L9 678 aa14.67□□□□□ -0.06
SCARNA20.5-201ENST00000516991 PLEKHA7Q6IQ23 1121 aa14.67□□□□□ -0.06
SCARNA20.5-201ENST00000516991 LIPIQ6XZB0 460 aa14.67□□□□□ -0.06
SCARNA20.5-201ENST00000516991 RFX8Q6ZV50 586 aa14.67□□□□□ -0.06
SCARNA20.5-201ENST00000516991 DPPA4Q7L190 304 aa14.67□□□□□ -0.06
SCARNA20.5-201ENST00000516991 B3GNT8Q7Z7M8 397 aa14.67□□□□□ -0.06
SCARNA20.5-201ENST00000516991 ARHGAP12Q8IWW6 846 aa14.67□□□□□ -0.06
SCARNA20.5-201ENST00000516991 FNIP1Q8TF40 1166 aa14.67□□□□□ -0.06
SCARNA20.5-201ENST00000516991 OR1E3Q8WZA6 343 aa14.67□□□□□ -0.06
SCARNA20.5-201ENST00000516991 CCNL2Q96S94 520 aaPredicted RBP14.67□□□□□ -0.06
SCARNA20.5-201ENST00000516991 SYT11Q9BT88 431 aa14.67□□□□□ -0.06
SCARNA20.5-201ENST00000516991 LRRN3Q9H3W5 708 aa14.67□□□□□ -0.06
SCARNA20.5-201ENST00000516991 WDR26Q9H7D7 661 aa14.67□□□□□ -0.06
SCARNA20.5-201ENST00000516991 FGF22Q9HCT0 170 aa14.67□□□□□ -0.06
SCARNA20.5-201ENST00000516991 KCTD5Q9NXV2 234 aa14.67□□□□□ -0.06
SCARNA20.5-201ENST00000516991 SEPT3Q9UH03 358 aa14.67□□□□□ -0.06
SCARNA20.5-201ENST00000516991 RABGEF1Q9UJ41 708 aa14.67□□□□□ -0.06
SCARNA20.5-201ENST00000516991 APPL1Q9UKG1 709 aa14.67□□□□□ -0.06
SCARNA20.5-201ENST00000516991 ASH1LQ9NR48 2969 aaKnown RBP14.66□□□□□ -0.06
SCARNA20.5-201ENST00000516991 SCN8AQ9UQD0 1980 aa14.66□□□□□ -0.06
SCARNA20.5-201ENST00000516991 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP14.66□□□□□ -0.06
SCARNA20.5-201ENST00000516991 A0A1W2PQM1 296 aa14.66□□□□□ -0.06
SCARNA20.5-201ENST00000516991 J3QKU1 62 aa14.66□□□□□ -0.06
SCARNA20.5-201ENST00000516991 DFFAO00273 331 aa14.66□□□□□ -0.06
SCARNA20.5-201ENST00000516991 PRPSAP2O60256 369 aa14.66□□□□□ -0.06
SCARNA20.5-201ENST00000516991 JMJD7P0C870 316 aa14.66□□□□□ -0.06
SCARNA20.5-201ENST00000516991 ATP1A3P13637 1013 aa14.66□□□□□ -0.06
SCARNA20.5-201ENST00000516991 ERCC2P18074 760 aa14.66□□□□□ -0.06
SCARNA20.5-201ENST00000516991 NFKBIAP25963 317 aa14.66□□□□□ -0.06
SCARNA20.5-201ENST00000516991 UGT1A5P35504 534 aa14.66□□□□□ -0.06
SCARNA20.5-201ENST00000516991 HSPA9P38646 679 aaKnown RBP14.66□□□□□ -0.06
SCARNA20.5-201ENST00000516991 HCAR3P49019 387 aa14.66□□□□□ -0.06
SCARNA20.5-201ENST00000516991 TCEA2Q15560 299 aa14.66□□□□□ -0.06
SCARNA20.5-201ENST00000516991 CA9Q16790 459 aa14.66□□□□□ -0.06
SCARNA20.5-201ENST00000516991 ZSCAN23Q3MJ62 389 aa14.66□□□□□ -0.06
SCARNA20.5-201ENST00000516991 C14orf28Q4W4Y0 310 aa14.66□□□□□ -0.06
SCARNA20.5-201ENST00000516991 TMCO4Q5TGY1 634 aa14.66□□□□□ -0.06
SCARNA20.5-201ENST00000516991 OGFOD3Q6PK18 319 aa14.66□□□□□ -0.06
SCARNA20.5-201ENST00000516991 APTXQ7Z2E3 356 aaKnown RBP14.66□□□□□ -0.06
SCARNA20.5-201ENST00000516991 IRF2BP2Q7Z5L9 587 aa14.66□□□□□ -0.06
SCARNA20.5-201ENST00000516991 TAF8Q7Z7C8 310 aa14.66□□□□□ -0.06
SCARNA20.5-201ENST00000516991 JAMLQ86YT9 394 aa14.66□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms