RNA–Protein interactions for RNA: ENST00000516847.1

RN7SKP88-201, Transcript of RNA, 7SK small nuclear pseudogene 88, humanhuman

BASIC

Gene RN7SKP88, Length 250 nt, Biotype misc RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RN7SKP88-201ENST00000516847 Q8NFD4 153 aa1.36□□□□□ -2.19
RN7SKP88-201ENST00000516847 BEST2Q8NFU1 509 aa1.36□□□□□ -2.19
RN7SKP88-201ENST00000516847 OR6J1Q8NGC5 347 aa1.36□□□□□ -2.19
RN7SKP88-201ENST00000516847 OR8H1Q8NGG4 311 aa1.36□□□□□ -2.19
RN7SKP88-201ENST00000516847 IL17DQ8TAD2 202 aa1.36□□□□□ -2.19
RN7SKP88-201ENST00000516847 ACTRT2Q8TDY3 377 aa1.36□□□□□ -2.19
RN7SKP88-201ENST00000516847 CACTINQ8WUQ7 758 aaKnown RBP1.36□□□□□ -2.19
RN7SKP88-201ENST00000516847 NEU4Q8WWR8 484 aaPredicted RBP1.36□□□□□ -2.19
RN7SKP88-201ENST00000516847 ADAMTS14Q8WXS8 1223 aa1.36□□□□□ -2.19
RN7SKP88-201ENST00000516847 LINC00476Q8WZB0 136 aa1.36□□□□□ -2.19
RN7SKP88-201ENST00000516847 LPGAT1Q92604 370 aa1.36□□□□□ -2.19
RN7SKP88-201ENST00000516847 KAT2BQ92831 832 aa1.36□□□□□ -2.19
RN7SKP88-201ENST00000516847 HAS1Q92839 578 aa1.36□□□□□ -2.19
RN7SKP88-201ENST00000516847 PTP4A1Q93096 173 aa1.36□□□□□ -2.19
RN7SKP88-201ENST00000516847 CCDC47Q96A33 483 aaKnown RBP1.36□□□□□ -2.19
RN7SKP88-201ENST00000516847 FBXL8Q96CD0 374 aa1.36□□□□□ -2.19
RN7SKP88-201ENST00000516847 RNF183Q96D59 192 aa1.36□□□□□ -2.19
RN7SKP88-201ENST00000516847 PABPC5Q96DU9 382 aaKnown RBP1.36□□□□□ -2.19
RN7SKP88-201ENST00000516847 RRNAD1Q96FB5 475 aaKnown RBP1.36□□□□□ -2.19
RN7SKP88-201ENST00000516847 SIPA1Q96FS4 1042 aa1.36□□□□□ -2.19
RN7SKP88-201ENST00000516847 SLC41A2Q96JW4 573 aa1.36□□□□□ -2.19
RN7SKP88-201ENST00000516847 PDLIM2Q96JY6 352 aa1.36□□□□□ -2.19
RN7SKP88-201ENST00000516847 CCDC17Q96LX7 622 aa1.36□□□□□ -2.19
RN7SKP88-201ENST00000516847 FER1L6-AS2Q96M78 137 aa1.36□□□□□ -2.19
RN7SKP88-201ENST00000516847 HARBI1Q96MB7 349 aa1.36□□□□□ -2.19
RN7SKP88-201ENST00000516847 CCDC43Q96MW1 224 aaKnown RBP1.36□□□□□ -2.19
RN7SKP88-201ENST00000516847 LRRC3BQ96PB8 259 aa1.36□□□□□ -2.19
RN7SKP88-201ENST00000516847 BBS4Q96RK4 519 aa1.36□□□□□ -2.19
RN7SKP88-201ENST00000516847 FNBP1Q96RU3 617 aa1.36□□□□□ -2.19
RN7SKP88-201ENST00000516847 PAFAH2Q99487 392 aa1.36□□□□□ -2.19
RN7SKP88-201ENST00000516847 FAM110AQ9BQ89 295 aa1.36□□□□□ -2.19
RN7SKP88-201ENST00000516847 TMEM47Q9BQJ4 181 aa1.36□□□□□ -2.19
RN7SKP88-201ENST00000516847 MXRA8Q9BRK3 442 aa1.36□□□□□ -2.19
RN7SKP88-201ENST00000516847 SRSF8Q9BRL6 282 aaKnown RBP1.36□□□□□ -2.19
RN7SKP88-201ENST00000516847 NAA11Q9BSU3 229 aaPredicted RBP1.36□□□□□ -2.19
RN7SKP88-201ENST00000516847 PI4K2AQ9BTU6 479 aa1.36□□□□□ -2.19
RN7SKP88-201ENST00000516847 THUMPD3Q9BV44 507 aaKnown RBP1.36□□□□□ -2.19
RN7SKP88-201ENST00000516847 C1QTNF5Q9BXJ0 243 aa1.36□□□□□ -2.19
RN7SKP88-201ENST00000516847 RTN4RQ9BZR6 473 aa1.36□□□□□ -2.19
RN7SKP88-201ENST00000516847 ANKRD2Q9GZV1 360 aa1.36□□□□□ -2.19
RN7SKP88-201ENST00000516847 MMP27Q9H306 513 aa1.36□□□□□ -2.19
RN7SKP88-201ENST00000516847 HIPK3Q9H422 1215 aa1.36□□□□□ -2.19
RN7SKP88-201ENST00000516847 CXorf56Q9H5V9 222 aa1.36□□□□□ -2.19
RN7SKP88-201ENST00000516847 OPA3Q9H6K4 179 aa1.36□□□□□ -2.19
RN7SKP88-201ENST00000516847 MAGIXQ9H6Y5 334 aa1.36□□□□□ -2.19
RN7SKP88-201ENST00000516847 ANKZF1Q9H8Y5 726 aa1.36□□□□□ -2.19
RN7SKP88-201ENST00000516847 ACTR5Q9H9F9 607 aaPredicted RBP1.36□□□□□ -2.19
RN7SKP88-201ENST00000516847 COPS7BQ9H9Q2 264 aaPredicted RBP1.36□□□□□ -2.19
RN7SKP88-201ENST00000516847 KIF9Q9HAQ2 790 aa1.36□□□□□ -2.19
RN7SKP88-201ENST00000516847 PIH1D3Q9NQM4 214 aaKnown RBP1.36□□□□□ -2.19
RN7SKP88-201ENST00000516847 ARL8BQ9NVJ2 186 aa1.36□□□□□ -2.19
RN7SKP88-201ENST00000516847 MTPAPQ9NVV4 582 aaKnown RBP eCLIP1.36□□□□□ -2.19
RN7SKP88-201ENST00000516847 ADPRHL2Q9NX46 363 aa1.36□□□□□ -2.19
RN7SKP88-201ENST00000516847 SYBUQ9NX95 663 aa1.36□□□□□ -2.19
RN7SKP88-201ENST00000516847 ARHGEF38Q9NXL2 777 aa1.36□□□□□ -2.19
RN7SKP88-201ENST00000516847 WDR35Q9P2L0 1181 aa1.36□□□□□ -2.19
RN7SKP88-201ENST00000516847 FRMD4AQ9P2Q2 1039 aaPredicted RBP1.36□□□□□ -2.19
RN7SKP88-201ENST00000516847 EPS15L1Q9UBC2 864 aa1.36□□□□□ -2.19
RN7SKP88-201ENST00000516847 CRNNQ9UBG3 495 aaPredicted RBP1.36□□□□□ -2.19
RN7SKP88-201ENST00000516847 DDX25Q9UHL0 483 aaKnown RBP1.36□□□□□ -2.19
RN7SKP88-201ENST00000516847 FBXW11Q9UKB1 542 aa1.36□□□□□ -2.19
RN7SKP88-201ENST00000516847 PLAGL1Q9UM63 463 aa1.36□□□□□ -2.19
RN7SKP88-201ENST00000516847 SLC8A2Q9UPR5 921 aa1.36□□□□□ -2.19
RN7SKP88-201ENST00000516847 ZNF148Q9UQR1 794 aa1.36□□□□□ -2.19
RN7SKP88-201ENST00000516847 FAM96BQ9Y3D0 163 aa1.36□□□□□ -2.19
RN7SKP88-201ENST00000516847 HEMK1Q9Y5R4 338 aaPredicted RBP1.36□□□□□ -2.19
RN7SKP88-201ENST00000516847 ZNF541Q9H0D2 1346 aa1.36□□□□□ -2.19
RN7SKP88-201ENST00000516847 A0A0A0MQY5 61 aa1.35□□□□□ -2.19
RN7SKP88-201ENST00000516847 TRBV5-7A0A0A0MS05 114 aa1.35□□□□□ -2.19
RN7SKP88-201ENST00000516847 TRAV34A0A0B4J273 112 aa1.35□□□□□ -2.19
RN7SKP88-201ENST00000516847 A0A0U1RQK1 487 aa1.35□□□□□ -2.19
RN7SKP88-201ENST00000516847 LOC105378220A0A1B0GUY1 285 aaPredicted RBP1.35□□□□□ -2.19
RN7SKP88-201ENST00000516847 KANSL1LA0AUZ9 987 aa1.35□□□□□ -2.19
RN7SKP88-201ENST00000516847 ZNF320A2RRD8 509 aa1.35□□□□□ -2.19
RN7SKP88-201ENST00000516847 TARSL2A2RTX5 802 aaKnown RBP1.35□□□□□ -2.19
RN7SKP88-201ENST00000516847 HTR3EA5X5Y0 456 aa1.35□□□□□ -2.19
RN7SKP88-201ENST00000516847 URADA6NGE7 173 aa1.35□□□□□ -2.19
RN7SKP88-201ENST00000516847 OTOL1A6NHN0 477 aaPredicted RBP1.35□□□□□ -2.19
RN7SKP88-201ENST00000516847 ANXA2P2A6NMY6 339 aa1.35□□□□□ -2.19
RN7SKP88-201ENST00000516847 HSPB2A8KAH6 182 aa1.35□□□□□ -2.19
RN7SKP88-201ENST00000516847 MAGEB17A8MXT2 336 aa1.35□□□□□ -2.19
RN7SKP88-201ENST00000516847 KDM4EB2RXH2 506 aaPredicted RBP1.35□□□□□ -2.19
RN7SKP88-201ENST00000516847 KLRF2D3W0D1 207 aa1.35□□□□□ -2.19
RN7SKP88-201ENST00000516847 DDX39AO00148 427 aaKnown RBP1.35□□□□□ -2.19
RN7SKP88-201ENST00000516847 CHL1O00533 1208 aa1.35□□□□□ -2.19
RN7SKP88-201ENST00000516847 RRHO14718 337 aa1.35□□□□□ -2.19
RN7SKP88-201ENST00000516847 MAP2K7O14733 419 aa1.35□□□□□ -2.19
RN7SKP88-201ENST00000516847 IFIT3O14879 490 aaKnown RBP1.35□□□□□ -2.19
RN7SKP88-201ENST00000516847 OGG1O15527 345 aa1.35□□□□□ -2.19
RN7SKP88-201ENST00000516847 PRPF4O43172 522 aaKnown RBP eCLIP1.35□□□□□ -2.19
RN7SKP88-201ENST00000516847 KLK8O60259 260 aa1.35□□□□□ -2.19
RN7SKP88-201ENST00000516847 EXOC3O60645 756 aa1.35□□□□□ -2.19
RN7SKP88-201ENST00000516847 FMO6PO60774 539 aa1.35□□□□□ -2.19
RN7SKP88-201ENST00000516847 GPC4O75487 556 aa1.35□□□□□ -2.19
RN7SKP88-201ENST00000516847 GCATO75600 419 aa1.35□□□□□ -2.19
RN7SKP88-201ENST00000516847 SLC22A3O75751 556 aa1.35□□□□□ -2.19
RN7SKP88-201ENST00000516847 NEURL1O76050 574 aa1.35□□□□□ -2.19
RN7SKP88-201ENST00000516847 JTBO76095 146 aa1.35□□□□□ -2.19
RN7SKP88-201ENST00000516847 TMCC1O94876 653 aa1.35□□□□□ -2.19
RN7SKP88-201ENST00000516847 ESRRBO95718 433 aa1.35□□□□□ -2.19
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms