RNA–Protein interactions for RNA: ENST00000516842.1

RNU6-557P-201, Transcript of RNA, U6 small nuclear 557, pseudogene, humanhuman

BASIC

Gene RNU6-557P, Length 110 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-557P-201ENST00000516842 TBX3O15119 743 aa-0.17□□□□□ -2.44
RNU6-557P-201ENST00000516842 PLRG1O43660 514 aaKnown RBP-0.17□□□□□ -2.44
RNU6-557P-201ENST00000516842 CTSVO60911 334 aa-0.17□□□□□ -2.44
RNU6-557P-201ENST00000516842 WDR1O75083 606 aa-0.17□□□□□ -2.44
RNU6-557P-201ENST00000516842 TRMUO75648 421 aaKnown RBP-0.17□□□□□ -2.44
RNU6-557P-201ENST00000516842 IGKV1D-16P01601 117 aa-0.17□□□□□ -2.44
RNU6-557P-201ENST00000516842 C9P02748 559 aa-0.17□□□□□ -2.44
RNU6-557P-201ENST00000516842 RAF1P04049 648 aa-0.17□□□□□ -2.44
RNU6-557P-201ENST00000516842 NR3C1P04150 777 aa-0.17□□□□□ -2.44
RNU6-557P-201ENST00000516842 CTAGE8P0CG41 777 aa-0.17□□□□□ -2.44
RNU6-557P-201ENST00000516842 MYBL2P10244 700 aa-0.17□□□□□ -2.44
RNU6-557P-201ENST00000516842 TCF3P15923 654 aa-0.17□□□□□ -2.44
RNU6-557P-201ENST00000516842 IGFBP2P18065 325 aa-0.17□□□□□ -2.44
RNU6-557P-201ENST00000516842 S1PR1P21453 382 aa-0.17□□□□□ -2.44
RNU6-557P-201ENST00000516842 USP8P40818 1118 aa-0.17□□□□□ -2.44
RNU6-557P-201ENST00000516842 MMP14P50281 582 aa-0.17□□□□□ -2.44
RNU6-557P-201ENST00000516842 TAS2R50P59544 299 aa-0.17□□□□□ -2.44
RNU6-557P-201ENST00000516842 MST1RQ04912 1400 aa-0.17□□□□□ -2.44
RNU6-557P-201ENST00000516842 CKAP4Q07065 602 aaKnown RBP-0.17□□□□□ -2.44
RNU6-557P-201ENST00000516842 GPS1Q13098 491 aa-0.17□□□□□ -2.44
RNU6-557P-201ENST00000516842 OLIG2Q13516 323 aa-0.17□□□□□ -2.44
RNU6-557P-201ENST00000516842 CBFBQ13951 182 aa-0.17□□□□□ -2.44
RNU6-557P-201ENST00000516842 FGL2Q14314 439 aa-0.17□□□□□ -2.44
RNU6-557P-201ENST00000516842 LPIN1Q14693 890 aa-0.17□□□□□ -2.44
RNU6-557P-201ENST00000516842 C5orf22Q49AR2 442 aa-0.17□□□□□ -2.44
RNU6-557P-201ENST00000516842 GTDC1Q4AE62 458 aa-0.17□□□□□ -2.44
RNU6-557P-201ENST00000516842 WDR93Q6P2C0 686 aa-0.17□□□□□ -2.44
RNU6-557P-201ENST00000516842 Q6P435 159 aa-0.17□□□□□ -2.44
RNU6-557P-201ENST00000516842 MZT2AQ6P582 158 aa-0.17□□□□□ -2.44
RNU6-557P-201ENST00000516842 ZNF534Q76KX8 674 aa-0.17□□□□□ -2.44
RNU6-557P-201ENST00000516842 RNF144BQ7Z419 303 aa-0.17□□□□□ -2.44
RNU6-557P-201ENST00000516842 ANKS1BQ7Z6G8 1248 aa-0.17□□□□□ -2.44
RNU6-557P-201ENST00000516842 CTAGE4Q8IX94 777 aa-0.17□□□□□ -2.44
RNU6-557P-201ENST00000516842 MIER2Q8N344 545 aa-0.17□□□□□ -2.44
RNU6-557P-201ENST00000516842 ZNF611Q8N823 705 aa-0.17□□□□□ -2.44
RNU6-557P-201ENST00000516842 Q8NBF4 154 aa-0.17□□□□□ -2.44
RNU6-557P-201ENST00000516842 OR52I2Q8NH67 350 aa-0.17□□□□□ -2.44
RNU6-557P-201ENST00000516842 SMCR8Q8TEV9 937 aaPredicted RBP-0.17□□□□□ -2.44
RNU6-557P-201ENST00000516842 FAR1Q8WVX9 515 aa-0.17□□□□□ -2.44
RNU6-557P-201ENST00000516842 MCRS1Q96EZ8 462 aa-0.17□□□□□ -2.44
RNU6-557P-201ENST00000516842 ZNF582Q96NG8 517 aaPredicted RBP-0.17□□□□□ -2.44
RNU6-557P-201ENST00000516842 PCYT2Q99447 389 aa-0.17□□□□□ -2.44
RNU6-557P-201ENST00000516842 CGRRF1Q99675 332 aa-0.17□□□□□ -2.44
RNU6-557P-201ENST00000516842 FKRPQ9H9S5 495 aa-0.17□□□□□ -2.44
RNU6-557P-201ENST00000516842 ZMAT3Q9HA38 289 aaKnown RBP-0.17□□□□□ -2.44
RNU6-557P-201ENST00000516842 TYW1Q9NV66 732 aaKnown RBP-0.17□□□□□ -2.44
RNU6-557P-201ENST00000516842 KLHL42Q9P2K6 505 aa-0.17□□□□□ -2.44
RNU6-557P-201ENST00000516842 IL17BQ9UHF5 180 aa-0.17□□□□□ -2.44
RNU6-557P-201ENST00000516842 ITGB1BP2Q9UKP3 347 aa-0.17□□□□□ -2.44
RNU6-557P-201ENST00000516842 ACAD8Q9UKU7 415 aa-0.17□□□□□ -2.44
RNU6-557P-201ENST00000516842 ACSL5Q9ULC5 683 aa-0.17□□□□□ -2.44
RNU6-557P-201ENST00000516842 USP19O94966 1318 aa-0.17□□□□□ -2.44
RNU6-557P-201ENST00000516842 SSPOA2VEC9 5147 aa-0.17□□□□□ -2.44
RNU6-557P-201ENST00000516842 COL1A2P08123 1366 aa-0.18□□□□□ -2.44
RNU6-557P-201ENST00000516842 A0A1W2PPL8 197 aa-0.18□□□□□ -2.44
RNU6-557P-201ENST00000516842 TARSL2A2RTX5 802 aaKnown RBP-0.18□□□□□ -2.44
RNU6-557P-201ENST00000516842 TRIM43BA6NCK2 446 aa-0.18□□□□□ -2.44
RNU6-557P-201ENST00000516842 C3orf70A6NLC5 250 aaPredicted RBP-0.18□□□□□ -2.44
RNU6-557P-201ENST00000516842 MAGEB17A8MXT2 336 aa-0.18□□□□□ -2.44
RNU6-557P-201ENST00000516842 EPHB6O15197 1021 aa-0.18□□□□□ -2.44
RNU6-557P-201ENST00000516842 IDH3BO43837 385 aa-0.18□□□□□ -2.44
RNU6-557P-201ENST00000516842 DFNA5O60443 496 aa-0.18□□□□□ -2.44
RNU6-557P-201ENST00000516842 SLC24A1O60721 1099 aa-0.18□□□□□ -2.44
RNU6-557P-201ENST00000516842 HOXD4P09016 255 aaPredicted RBP-0.18□□□□□ -2.44
RNU6-557P-201ENST00000516842 TXNP10599 105 aaKnown RBP-0.18□□□□□ -2.44
RNU6-557P-201ENST00000516842 FCGR2AP12318 317 aa-0.18□□□□□ -2.44
RNU6-557P-201ENST00000516842 SELLP14151 372 aa-0.18□□□□□ -2.44
RNU6-557P-201ENST00000516842 CORO1AP31146 461 aaKnown RBP-0.18□□□□□ -2.44
RNU6-557P-201ENST00000516842 ATICP31939 592 aa-0.18□□□□□ -2.44
RNU6-557P-201ENST00000516842 CHRNA3P32297 505 aa-0.18□□□□□ -2.44
RNU6-557P-201ENST00000516842 MAPK9P45984 424 aa-0.18□□□□□ -2.44
RNU6-557P-201ENST00000516842 ZFP36L2P47974 494 aaKnown RBP-0.18□□□□□ -2.44
RNU6-557P-201ENST00000516842 ZNF133P52736 654 aaPredicted RBP-0.18□□□□□ -2.44
RNU6-557P-201ENST00000516842 TERF1P54274 439 aa-0.18□□□□□ -2.44
RNU6-557P-201ENST00000516842 FOXL2P58012 376 aa-0.18□□□□□ -2.44
RNU6-557P-201ENST00000516842 CD300CQ08708 224 aa-0.18□□□□□ -2.44
RNU6-557P-201ENST00000516842 FAM27E3Q08E93 113 aa-0.18□□□□□ -2.44
RNU6-557P-201ENST00000516842 GTF2H2Q13888 395 aa-0.18□□□□□ -2.44
RNU6-557P-201ENST00000516842 HNRNPDQ14103 355 aaKnown RBP-0.18□□□□□ -2.44
RNU6-557P-201ENST00000516842 EBI3Q14213 229 aa-0.18□□□□□ -2.44
RNU6-557P-201ENST00000516842 E2F5Q15329 346 aa-0.18□□□□□ -2.44
RNU6-557P-201ENST00000516842 KRTAP6-3Q3LI67 103 aa-0.18□□□□□ -2.44
RNU6-557P-201ENST00000516842 EFCAB2Q5VUJ9 269 aa-0.18□□□□□ -2.44
RNU6-557P-201ENST00000516842 GTF2H2CQ6P1K8 395 aa-0.18□□□□□ -2.44
RNU6-557P-201ENST00000516842 B3GNT6Q6ZMB0 384 aa-0.18□□□□□ -2.44
RNU6-557P-201ENST00000516842 WDR5BQ86VZ2 330 aa-0.18□□□□□ -2.44
RNU6-557P-201ENST00000516842 HOMER1Q86YM7 354 aa-0.18□□□□□ -2.44
RNU6-557P-201ENST00000516842 RNF113BQ8IZP6 322 aaKnown RBP-0.18□□□□□ -2.44
RNU6-557P-201ENST00000516842 CNTD1Q8N815 330 aa-0.18□□□□□ -2.44
RNU6-557P-201ENST00000516842 RHOXF1Q8NHV9 184 aa-0.18□□□□□ -2.44
RNU6-557P-201ENST00000516842 ABHD5Q8WTS1 349 aa-0.18□□□□□ -2.44
RNU6-557P-201ENST00000516842 CLEC4CQ8WTT0 213 aa-0.18□□□□□ -2.44
RNU6-557P-201ENST00000516842 TOMM40LQ969M1 308 aa-0.18□□□□□ -2.44
RNU6-557P-201ENST00000516842 TRIM43Q96BQ3 446 aaPredicted RBP-0.18□□□□□ -2.44
RNU6-557P-201ENST00000516842 LINGO1Q96FE5 620 aa-0.18□□□□□ -2.44
RNU6-557P-201ENST00000516842 PDLIM5Q96HC4 596 aaKnown RBP-0.18□□□□□ -2.44
RNU6-557P-201ENST00000516842 SYT17Q9BSW7 474 aa-0.18□□□□□ -2.44
RNU6-557P-201ENST00000516842 STK33Q9BYT3 514 aa-0.18□□□□□ -2.44
RNU6-557P-201ENST00000516842 ZCWPW1Q9H0M4 648 aa-0.18□□□□□ -2.44
RNU6-557P-201ENST00000516842 FBXO28Q9NVF7 368 aa-0.18□□□□□ -2.44
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms