RNA–Protein interactions for RNA: ENST00000516052.1

SCARNA20.2-201, small Cajal body-specific RNA 20, humanhuman

BASIC

Gene SCARNA20, Length 116 nt, Biotype scaRNA, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA20.2-201ENST00000516052 AGO1Q9UL18 857 aaKnown RBP-0.72□□□□□ -2.52
SCARNA20.2-201ENST00000516052 ACSL5Q9ULC5 683 aa-0.72□□□□□ -2.52
SCARNA20.2-201ENST00000516052 BRPF3Q9ULD4 1205 aa-0.72□□□□□ -2.52
SCARNA20.2-201ENST00000516052 PNMA8BQ9ULN7 279 aaPredicted RBP-0.72□□□□□ -2.52
SCARNA20.2-201ENST00000516052 MYO6Q9UM54 1294 aa-0.72□□□□□ -2.52
SCARNA20.2-201ENST00000516052 PHTF1Q9UMS5 762 aa-0.72□□□□□ -2.52
SCARNA20.2-201ENST00000516052 UBQLN1Q9UMX0 589 aaKnown RBP-0.72□□□□□ -2.52
SCARNA20.2-201ENST00000516052 SLC45A2Q9UMX9 530 aa-0.72□□□□□ -2.52
SCARNA20.2-201ENST00000516052 G3BP2Q9UN86 482 aaKnown RBP-0.72□□□□□ -2.52
SCARNA20.2-201ENST00000516052 LSM4Q9Y4Z0 139 aaKnown RBP-0.72□□□□□ -2.52
SCARNA20.2-201ENST00000516052 PCDHGC5Q9Y5F6 944 aa-0.72□□□□□ -2.52
SCARNA20.2-201ENST00000516052 KLK4Q9Y5K2 254 aa-0.72□□□□□ -2.52
SCARNA20.2-201ENST00000516052 CD2APQ9Y5K6 639 aa-0.72□□□□□ -2.52
SCARNA20.2-201ENST00000516052 LIPGQ9Y5X9 500 aa-0.72□□□□□ -2.52
SCARNA20.2-201ENST00000516052 B3GALT1Q9Y5Z6 326 aa-0.72□□□□□ -2.52
SCARNA20.2-201ENST00000516052 ETV7Q9Y603 341 aa-0.72□□□□□ -2.52
SCARNA20.2-201ENST00000516052 ACTL7BQ9Y614 415 aa-0.72□□□□□ -2.52
SCARNA20.2-201ENST00000516052 CYP46A1Q9Y6A2 500 aa-0.72□□□□□ -2.52
SCARNA20.2-201ENST00000516052 WSB1Q9Y6I7 421 aa-0.72□□□□□ -2.52
SCARNA20.2-201ENST00000516052 CSNK1G3Q9Y6M4 447 aa-0.72□□□□□ -2.52
SCARNA20.2-201ENST00000516052 RPS6KL1Q9Y6S9 549 aa-0.72□□□□□ -2.52
SCARNA20.2-201ENST00000516052 PIAS3Q9Y6X2 628 aa-0.72□□□□□ -2.52
SCARNA20.2-201ENST00000516052 BICRAQ9NZM4 1560 aa-0.72□□□□□ -2.52
SCARNA20.2-201ENST00000516052 ANK1P16157 1881 aa-0.72□□□□□ -2.52
SCARNA20.2-201ENST00000516052 TAF1P21675 1872 aa-0.72□□□□□ -2.52
SCARNA20.2-201ENST00000516052 NAV1Q8NEY1 1877 aa-0.72□□□□□ -2.52
SCARNA20.2-201ENST00000516052 UTYO14607 1347 aa-0.72□□□□□ -2.52
SCARNA20.2-201ENST00000516052 NEDD4P46934 1319 aa-0.72□□□□□ -2.52
SCARNA20.2-201ENST00000516052 AK9Q5TCS8 1911 aa-0.72□□□□□ -2.53
SCARNA20.2-201ENST00000516052 MYH14Q7Z406 1995 aaKnown RBP-0.72□□□□□ -2.53
SCARNA20.2-201ENST00000516052 BRD4O60885 1362 aaPredicted RBP-0.72□□□□□ -2.53
SCARNA20.2-201ENST00000516052 METP08581 1390 aa-0.72□□□□□ -2.53
SCARNA20.2-201ENST00000516052 ZMYM2Q9UBW7 1377 aa-0.72□□□□□ -2.53
SCARNA20.2-201ENST00000516052 DSCAMO60469 2012 aa-0.72□□□□□ -2.53
SCARNA20.2-201ENST00000516052 ADAMTS13Q76LX8 1427 aa-0.72□□□□□ -2.53
SCARNA20.2-201ENST00000516052 FER1L5A0AVI2 2057 aa-0.73□□□□□ -2.53
SCARNA20.2-201ENST00000516052 ADGRL1O94910 1474 aa-0.73□□□□□ -2.53
SCARNA20.2-201ENST00000516052 MGAMO43451 1857 aa-0.73□□□□□ -2.53
SCARNA20.2-201ENST00000516052 VWA8A3KMH1 1905 aa-0.73□□□□□ -2.53
SCARNA20.2-201ENST00000516052 NEURL4Q96JN8 1562 aa-0.73□□□□□ -2.53
SCARNA20.2-201ENST00000516052 DICER1Q9UPY3 1922 aaKnown RBP-0.73□□□□□ -2.53
SCARNA20.2-201ENST00000516052 CASP8AP2Q9UKL3 1982 aa-0.73□□□□□ -2.53
SCARNA20.2-201ENST00000516052 NHSL1Q5SYE7 1610 aa-0.73□□□□□ -2.53
SCARNA20.2-201ENST00000516052 AHDC1Q5TGY3 1603 aaPredicted RBP-0.73□□□□□ -2.53
SCARNA20.2-201ENST00000516052 IGHV3OR16-10A0A075B7F0 116 aa-0.73□□□□□ -2.53
SCARNA20.2-201ENST00000516052 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP-0.73□□□□□ -2.53
SCARNA20.2-201ENST00000516052 TRAV40A0A0B4J280 105 aa-0.73□□□□□ -2.53
SCARNA20.2-201ENST00000516052 TRGV4A0A0C4DH28 118 aa-0.73□□□□□ -2.53
SCARNA20.2-201ENST00000516052 TEX13CA0A0J9YWL9 993 aa-0.73□□□□□ -2.53
SCARNA20.2-201ENST00000516052 KLF18A0A0U1RQI7 1052 aa-0.73□□□□□ -2.53
SCARNA20.2-201ENST00000516052 LCE6AA0A183 80 aa-0.73□□□□□ -2.53
SCARNA20.2-201ENST00000516052 C17orf113A0A1B0GUU1 675 aa-0.73□□□□□ -2.53
SCARNA20.2-201ENST00000516052 SPAARA0A1B0GVQ0 90 aa-0.73□□□□□ -2.53
SCARNA20.2-201ENST00000516052 LOC107986453A0A1B0GWG9 222 aa-0.73□□□□□ -2.53
SCARNA20.2-201ENST00000516052 A0A1W2PPM1 405 aa-0.73□□□□□ -2.53
SCARNA20.2-201ENST00000516052 LCHNA4D1U4 455 aa-0.73□□□□□ -2.53
SCARNA20.2-201ENST00000516052 ZSCAN5CA6NGD5 496 aaPredicted RBP-0.73□□□□□ -2.53
SCARNA20.2-201ENST00000516052 FAM90A20PA6NIJ5 464 aa-0.73□□□□□ -2.53
SCARNA20.2-201ENST00000516052 TRIM75PA6NK02 468 aa-0.73□□□□□ -2.53
SCARNA20.2-201ENST00000516052 FAM90A7PA6NKC0 464 aa-0.73□□□□□ -2.53
SCARNA20.2-201ENST00000516052 A8MV72 311 aaPredicted RBP-0.73□□□□□ -2.53
SCARNA20.2-201ENST00000516052 BECN2A8MW95 431 aa-0.73□□□□□ -2.53
SCARNA20.2-201ENST00000516052 WASH4PA8MWX3 477 aa-0.73□□□□□ -2.53
SCARNA20.2-201ENST00000516052 A8MX80 341 aa-0.73□□□□□ -2.53
SCARNA20.2-201ENST00000516052 FAM90A23PA8MXZ1 464 aa-0.73□□□□□ -2.53
SCARNA20.2-201ENST00000516052 LEUTXA8MZ59 168 aa-0.73□□□□□ -2.53
SCARNA20.2-201ENST00000516052 TARM1B6A8C7 271 aa-0.73□□□□□ -2.53
SCARNA20.2-201ENST00000516052 TRIM49D1C9J1S8 452 aa-0.73□□□□□ -2.53
SCARNA20.2-201ENST00000516052 NT5C1B-RDH14C9J2C7 533 aa-0.73□□□□□ -2.53
SCARNA20.2-201ENST00000516052 HHLA1C9JL84 531 aa-0.73□□□□□ -2.53
SCARNA20.2-201ENST00000516052 C9JVG2 144 aa-0.73□□□□□ -2.53
SCARNA20.2-201ENST00000516052 INAFM1C9JVW0 142 aa-0.73□□□□□ -2.53
SCARNA20.2-201ENST00000516052 F5H697 171 aa-0.73□□□□□ -2.53
SCARNA20.2-201ENST00000516052 TMEM178BH3BS89 294 aa-0.73□□□□□ -2.53
SCARNA20.2-201ENST00000516052 K7EIL1 84 aa-0.73□□□□□ -2.53
SCARNA20.2-201ENST00000516052 SMIM22K7EJ46 135 aa-0.73□□□□□ -2.53
SCARNA20.2-201ENST00000516052 DNASE2O00115 360 aaPredicted RBP-0.73□□□□□ -2.53
SCARNA20.2-201ENST00000516052 EEF2KO00418 725 aaKnown RBP-0.73□□□□□ -2.53
SCARNA20.2-201ENST00000516052 IGF2BP3O00425 579 aaKnown RBP eCLIP-0.73□□□□□ -2.53
SCARNA20.2-201ENST00000516052 MAN2B1O00754 1011 aa-0.73□□□□□ -2.53
SCARNA20.2-201ENST00000516052 BACH1O14867 736 aa-0.73□□□□□ -2.53
SCARNA20.2-201ENST00000516052 NCR3O14931 201 aa-0.73□□□□□ -2.53
SCARNA20.2-201ENST00000516052 TRIM24O15164 1050 aa-0.73□□□□□ -2.53
SCARNA20.2-201ENST00000516052 WDR46O15213 610 aaKnown RBP-0.73□□□□□ -2.53
SCARNA20.2-201ENST00000516052 SLC22A2O15244 555 aa-0.73□□□□□ -2.53
SCARNA20.2-201ENST00000516052 SEC14L5O43304 696 aa-0.73□□□□□ -2.53
SCARNA20.2-201ENST00000516052 NRDCO43847 1150 aa-0.73□□□□□ -2.53
SCARNA20.2-201ENST00000516052 SH3BP5O60239 455 aa-0.73□□□□□ -2.53
SCARNA20.2-201ENST00000516052 SNAP91O60641 907 aa-0.73□□□□□ -2.53
SCARNA20.2-201ENST00000516052 SLC19A2O60779 497 aa-0.73□□□□□ -2.53
SCARNA20.2-201ENST00000516052 TBL1XO60907 577 aa-0.73□□□□□ -2.53
SCARNA20.2-201ENST00000516052 NBNO60934 754 aa-0.73□□□□□ -2.53
SCARNA20.2-201ENST00000516052 PHACTR2O75167 634 aa-0.73□□□□□ -2.53
SCARNA20.2-201ENST00000516052 NCR1O76036 304 aa-0.73□□□□□ -2.53
SCARNA20.2-201ENST00000516052 SPDEFO95238 335 aa-0.73□□□□□ -2.53
SCARNA20.2-201ENST00000516052 NDUFA10O95299 355 aa-0.73□□□□□ -2.53
SCARNA20.2-201ENST00000516052 SYF2O95926 243 aaKnown RBP-0.73□□□□□ -2.53
SCARNA20.2-201ENST00000516052 BCL10O95999 233 aa-0.73□□□□□ -2.53
SCARNA20.2-201ENST00000516052 ACTL6AO96019 429 aa-0.73□□□□□ -2.53
SCARNA20.2-201ENST00000516052 PDGFAP04085 211 aa-0.73□□□□□ -2.53
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms