RNA–Protein interactions for RNA: ENST00000516009.1

SCARNA20.1-201, small Cajal body-specific RNA 20, humanhuman

BASIC

Gene SCARNA20, Length 138 nt, Biotype scaRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA20.1-201ENST00000516009 VASPP50552 380 aaPredicted RBP7.67□□□□□ -1.18
SCARNA20.1-201ENST00000516009 CCNHP51946 323 aaPredicted RBP7.67□□□□□ -1.18
SCARNA20.1-201ENST00000516009 LIMK2P53671 638 aa7.67□□□□□ -1.18
SCARNA20.1-201ENST00000516009 ST8SIA6P61647 398 aa7.67□□□□□ -1.18
SCARNA20.1-201ENST00000516009 PDE1BQ01064 536 aa7.67□□□□□ -1.18
SCARNA20.1-201ENST00000516009 ACVR1Q04771 509 aa7.67□□□□□ -1.18
SCARNA20.1-201ENST00000516009 SLC18A2Q05940 514 aa7.67□□□□□ -1.18
SCARNA20.1-201ENST00000516009 RUNX3Q13761 415 aa7.67□□□□□ -1.18
SCARNA20.1-201ENST00000516009 MPP2Q14168 576 aa7.67□□□□□ -1.18
SCARNA20.1-201ENST00000516009 GRM2Q14416 872 aa7.67□□□□□ -1.18
SCARNA20.1-201ENST00000516009 EIF4HQ15056 248 aaKnown RBP7.67□□□□□ -1.18
SCARNA20.1-201ENST00000516009 TAF1AQ15573 450 aaPredicted RBP7.67□□□□□ -1.18
SCARNA20.1-201ENST00000516009 SEPT7Q16181 437 aaKnown RBP7.67□□□□□ -1.18
SCARNA20.1-201ENST00000516009 GAB4Q2WGN9 574 aa7.67□□□□□ -1.18
SCARNA20.1-201ENST00000516009 MYLK3Q32MK0 819 aa7.67□□□□□ -1.18
SCARNA20.1-201ENST00000516009 ZNF470Q6ECI4 717 aa7.67□□□□□ -1.18
SCARNA20.1-201ENST00000516009 NEPROQ6NW34 567 aa7.67□□□□□ -1.18
SCARNA20.1-201ENST00000516009 KIAA0408Q6ZU52 694 aa7.67□□□□□ -1.18
SCARNA20.1-201ENST00000516009 Q6ZVU0 165 aa7.67□□□□□ -1.18
SCARNA20.1-201ENST00000516009 MTSS1LQ765P7 747 aa7.67□□□□□ -1.18
SCARNA20.1-201ENST00000516009 C12orf40Q86WS4 652 aa7.67□□□□□ -1.18
SCARNA20.1-201ENST00000516009 LMNTD2Q8IXW0 634 aa7.67□□□□□ -1.18
SCARNA20.1-201ENST00000516009 PLPP6Q8IY26 295 aa7.67□□□□□ -1.18
SCARNA20.1-201ENST00000516009 NDUFAF2Q8N183 169 aa7.67□□□□□ -1.18
SCARNA20.1-201ENST00000516009 OTUD6BQ8N6M0 293 aa7.67□□□□□ -1.18
SCARNA20.1-201ENST00000516009 BANPQ8N9N5 519 aa7.67□□□□□ -1.18
SCARNA20.1-201ENST00000516009 OR13J1Q8NGT2 312 aa7.67□□□□□ -1.18
SCARNA20.1-201ENST00000516009 OR6P1Q8NGX9 317 aa7.67□□□□□ -1.18
SCARNA20.1-201ENST00000516009 MGARPQ8TDB4 240 aa7.67□□□□□ -1.18
SCARNA20.1-201ENST00000516009 ACMSDQ8TDX5 336 aa7.67□□□□□ -1.18
SCARNA20.1-201ENST00000516009 CYB5D2Q8WUJ1 264 aa7.67□□□□□ -1.18
SCARNA20.1-201ENST00000516009 ATXN2LQ8WWM7 1075 aaKnown RBP7.67□□□□□ -1.18
SCARNA20.1-201ENST00000516009 HDAC10Q969S8 669 aa7.67□□□□□ -1.18
SCARNA20.1-201ENST00000516009 SGSM3Q96HU1 749 aa7.67□□□□□ -1.18
SCARNA20.1-201ENST00000516009 APOPT1Q96IL0 206 aa7.67□□□□□ -1.18
SCARNA20.1-201ENST00000516009 VPS39Q96JC1 886 aa7.67□□□□□ -1.18
SCARNA20.1-201ENST00000516009 SERAC1Q96JX3 654 aa7.67□□□□□ -1.18
SCARNA20.1-201ENST00000516009 DNAJC1Q96KC8 554 aaKnown RBP7.67□□□□□ -1.18
SCARNA20.1-201ENST00000516009 MSLNLQ96KJ4 702 aa7.67□□□□□ -1.18
SCARNA20.1-201ENST00000516009 MRGPRX3Q96LB0 322 aa7.67□□□□□ -1.18
SCARNA20.1-201ENST00000516009 SRPK1Q96SB4 655 aaKnown RBP7.67□□□□□ -1.18
SCARNA20.1-201ENST00000516009 KLF6Q99612 283 aaPredicted RBP7.67□□□□□ -1.18
SCARNA20.1-201ENST00000516009 CPEB1Q9BZB8 566 aaKnown RBP7.67□□□□□ -1.18
SCARNA20.1-201ENST00000516009 PLA2G2FQ9BZM2 168 aa7.67□□□□□ -1.18
SCARNA20.1-201ENST00000516009 IQCGQ9H095 443 aaKnown RBP7.67□□□□□ -1.18
SCARNA20.1-201ENST00000516009 TTYH1Q9H313 450 aaPredicted RBP7.67□□□□□ -1.18
SCARNA20.1-201ENST00000516009 MFSD1Q9H3U5 465 aa7.67□□□□□ -1.18
SCARNA20.1-201ENST00000516009 RHOJQ9H4E5 214 aa7.67□□□□□ -1.18
SCARNA20.1-201ENST00000516009 POMKQ9H5K3 350 aa7.67□□□□□ -1.18
SCARNA20.1-201ENST00000516009 ZDHHC6Q9H6R6 413 aa7.67□□□□□ -1.18
SCARNA20.1-201ENST00000516009 MAGEE1Q9HCI5 957 aa7.67□□□□□ -1.18
SCARNA20.1-201ENST00000516009 NLE1Q9NVX2 485 aaPredicted RBP7.67□□□□□ -1.18
SCARNA20.1-201ENST00000516009 ELOVL2Q9NXB9 296 aa7.67□□□□□ -1.18
SCARNA20.1-201ENST00000516009 GGT7Q9UJ14 662 aa7.67□□□□□ -1.18
SCARNA20.1-201ENST00000516009 KCTD3Q9Y597 815 aa7.67□□□□□ -1.18
SCARNA20.1-201ENST00000516009 MUC22E2RYF6 1773 aaPredicted RBP7.66□□□□□ -1.18
SCARNA20.1-201ENST00000516009 TCF20Q9UGU0 1960 aaKnown RBP7.66□□□□□ -1.18
SCARNA20.1-201ENST00000516009 A0A0J9YYE9 177 aa7.66□□□□□ -1.18
SCARNA20.1-201ENST00000516009 CCDC162PA2VCL2 907 aa7.66□□□□□ -1.18
SCARNA20.1-201ENST00000516009 OTOL1A6NHN0 477 aaPredicted RBP7.66□□□□□ -1.18
SCARNA20.1-201ENST00000516009 SRRM3A6NNA2 597 aaPredicted RBP7.66□□□□□ -1.18
SCARNA20.1-201ENST00000516009 TTC34A8MYJ7 566 aa7.66□□□□□ -1.18
SCARNA20.1-201ENST00000516009 PALM2-AKAP2B1ALY0 433 aaPredicted RBP7.66□□□□□ -1.18
SCARNA20.1-201ENST00000516009 CCL22O00626 93 aa7.66□□□□□ -1.18
SCARNA20.1-201ENST00000516009 TRAFD1O14545 582 aaPredicted RBP7.66□□□□□ -1.18
SCARNA20.1-201ENST00000516009 TPP1O14773 563 aa7.66□□□□□ -1.18
SCARNA20.1-201ENST00000516009 AURKAO14965 403 aa7.66□□□□□ -1.18
SCARNA20.1-201ENST00000516009 TM9SF1O15321 606 aa7.66□□□□□ -1.18
SCARNA20.1-201ENST00000516009 STX7O15400 261 aaKnown RBP7.66□□□□□ -1.18
SCARNA20.1-201ENST00000516009 BUD23O43709 281 aaKnown RBP7.66□□□□□ -1.18
SCARNA20.1-201ENST00000516009 TRBC1P01850 177 aa7.66□□□□□ -1.18
SCARNA20.1-201ENST00000516009 SLC4A1P02730 911 aa7.66□□□□□ -1.18
SCARNA20.1-201ENST00000516009 CTPS1P17812 591 aa7.66□□□□□ -1.18
SCARNA20.1-201ENST00000516009 TYK2P29597 1187 aa7.66□□□□□ -1.18
SCARNA20.1-201ENST00000516009 GJA4P35212 333 aa7.66□□□□□ -1.18
SCARNA20.1-201ENST00000516009 RPA3P35244 121 aaPredicted RBP7.66□□□□□ -1.18
SCARNA20.1-201ENST00000516009 CCNFP41002 786 aa7.66□□□□□ -1.18
SCARNA20.1-201ENST00000516009 SLC1A2P43004 574 aa7.66□□□□□ -1.18
SCARNA20.1-201ENST00000516009 SLC6A11P48066 632 aa7.66□□□□□ -1.18
SCARNA20.1-201ENST00000516009 CD151P48509 253 aa7.66□□□□□ -1.18
SCARNA20.1-201ENST00000516009 CCT5P48643 541 aa7.66□□□□□ -1.18
SCARNA20.1-201ENST00000516009 ARSDP51689 593 aa7.66□□□□□ -1.18
SCARNA20.1-201ENST00000516009 ZNF140P52738 457 aaPredicted RBP7.66□□□□□ -1.18
SCARNA20.1-201ENST00000516009 TMPRSS15P98073 1019 aa7.66□□□□□ -1.18
SCARNA20.1-201ENST00000516009 MPP1Q00013 466 aa7.66□□□□□ -1.18
SCARNA20.1-201ENST00000516009 KDSRQ06136 332 aa7.66□□□□□ -1.18
SCARNA20.1-201ENST00000516009 CTBP1Q13363 440 aa7.66□□□□□ -1.18
SCARNA20.1-201ENST00000516009 ADGRE1Q14246 886 aa7.66□□□□□ -1.18
SCARNA20.1-201ENST00000516009 PTPRCAPQ14761 206 aa7.66□□□□□ -1.18
SCARNA20.1-201ENST00000516009 COL19A1Q14993 1142 aa7.66□□□□□ -1.18
SCARNA20.1-201ENST00000516009 LRRC14Q15048 493 aa7.66□□□□□ -1.18
SCARNA20.1-201ENST00000516009 PREPLQ4J6C6 727 aaPredicted RBP7.66□□□□□ -1.18
SCARNA20.1-201ENST00000516009 HHATQ5VTY9 493 aa7.66□□□□□ -1.18
SCARNA20.1-201ENST00000516009 MRNIPQ6NTE8 343 aa7.66□□□□□ -1.18
SCARNA20.1-201ENST00000516009 PARM1Q6UWI2 310 aa7.66□□□□□ -1.18
SCARNA20.1-201ENST00000516009 DPY19L3Q6ZPD9 716 aa7.66□□□□□ -1.18
SCARNA20.1-201ENST00000516009 SH2D5Q6ZV89 423 aa7.66□□□□□ -1.18
SCARNA20.1-201ENST00000516009 PTAR1Q7Z6K3 402 aaPredicted RBP7.66□□□□□ -1.18
SCARNA20.1-201ENST00000516009 TAX1BP1Q86VP1 789 aa7.66□□□□□ -1.18
SCARNA20.1-201ENST00000516009 DENND6AQ8IWF6 608 aa7.66□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms