RNA–Protein interactions for RNA: ENST00000514987.5

NUP54-217, Transcript of nucleoporin 54, humanhuman

TSL 2 BASIC

Gene NUP54, Length 1,563 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-217ENST00000514987 SLC27A5Q9Y2P5 690 aa14.92□□□□□ -0.02
NUP54-217ENST00000514987 ARIH1Q9Y4X5 557 aaPredicted RBP14.92□□□□□ -0.02
NUP54-217ENST00000514987 A8MT66 165 aa14.91□□□□□ -0.02
NUP54-217ENST00000514987 SDHDO14521 159 aa14.91□□□□□ -0.02
NUP54-217ENST00000514987 AIM2O14862 343 aa14.91□□□□□ -0.02
NUP54-217ENST00000514987 AURKAO14965 403 aa14.91□□□□□ -0.02
NUP54-217ENST00000514987 KIF1CO43896 1103 aaKnown RBP14.91□□□□□ -0.02
NUP54-217ENST00000514987 ACSL4O60488 711 aa14.91□□□□□ -0.02
NUP54-217ENST00000514987 SMIM24O75264 130 aa14.91□□□□□ -0.02
NUP54-217ENST00000514987 PDE5AO76074 875 aa14.91□□□□□ -0.02
NUP54-217ENST00000514987 NDST3O95803 873 aa14.91□□□□□ -0.02
NUP54-217ENST00000514987 ATP5C1P36542 298 aaKnown RBP14.91□□□□□ -0.02
NUP54-217ENST00000514987 RPL26P61254 145 aaKnown RBP14.91□□□□□ -0.02
NUP54-217ENST00000514987 NFKB2Q00653 900 aa14.91□□□□□ -0.02
NUP54-217ENST00000514987 ART3Q13508 389 aa14.91□□□□□ -0.02
NUP54-217ENST00000514987 PDCD2Q16342 344 aaPredicted RBP14.91□□□□□ -0.02
NUP54-217ENST00000514987 RNF19BQ6ZMZ0 732 aa14.91□□□□□ -0.02
NUP54-217ENST00000514987 DSELQ8IZU8 1212 aa14.91□□□□□ -0.02
NUP54-217ENST00000514987 LGI2Q8N0V4 545 aa14.91□□□□□ -0.02
NUP54-217ENST00000514987 PLCD3Q8N3E9 789 aa14.91□□□□□ -0.02
NUP54-217ENST00000514987 GPR152Q8TDT2 470 aa14.91□□□□□ -0.02
NUP54-217ENST00000514987 ECSITQ9BQ95 431 aa14.91□□□□□ -0.02
NUP54-217ENST00000514987 TTPALQ9BTX7 342 aa14.91□□□□□ -0.02
NUP54-217ENST00000514987 SHCBP1LQ9BZQ2 653 aa14.91□□□□□ -0.02
NUP54-217ENST00000514987 MEAF6Q9HAF1 191 aa14.91□□□□□ -0.02
NUP54-217ENST00000514987 PDFQ9HBH1 243 aa14.91□□□□□ -0.02
NUP54-217ENST00000514987 INTS10Q9NVR2 710 aaKnown RBP14.91□□□□□ -0.02
NUP54-217ENST00000514987 UTP6Q9NYH9 597 aaKnown RBP14.91□□□□□ -0.02
NUP54-217ENST00000514987 PPM1HQ9ULR3 514 aa14.91□□□□□ -0.02
NUP54-217ENST00000514987 PHF24Q9UPV7 400 aa14.91□□□□□ -0.02
NUP54-217ENST00000514987 MAGEA13PA6NCF6 341 aa14.9□□□□□ -0.02
NUP54-217ENST00000514987 CD3EAPO15446 510 aaKnown RBP14.9□□□□□ -0.02
NUP54-217ENST00000514987 PEX1O43933 1283 aa14.9□□□□□ -0.02
NUP54-217ENST00000514987 CRTAMO95727 393 aa14.9□□□□□ -0.02
NUP54-217ENST00000514987 FDXRP22570 491 aa14.9□□□□□ -0.02
NUP54-217ENST00000514987 ETFBP38117 255 aa14.9□□□□□ -0.02
NUP54-217ENST00000514987 CCR10P46092 362 aa14.9□□□□□ -0.02
NUP54-217ENST00000514987 TUFMP49411 452 aaKnown RBP14.9□□□□□ -0.02
NUP54-217ENST00000514987 SUOXP51687 545 aa14.9□□□□□ -0.02
NUP54-217ENST00000514987 PGGT1BP53609 377 aa14.9□□□□□ -0.02
NUP54-217ENST00000514987 INHBCP55103 352 aa14.9□□□□□ -0.02
NUP54-217ENST00000514987 CDH4P55283 916 aa14.9□□□□□ -0.02
NUP54-217ENST00000514987 NAA20P61599 178 aa14.9□□□□□ -0.02
NUP54-217ENST00000514987 GNA12Q03113 381 aa14.9□□□□□ -0.02
NUP54-217ENST00000514987 SULT2A1Q06520 285 aa14.9□□□□□ -0.02
NUP54-217ENST00000514987 STX5Q13190 355 aa14.9□□□□□ -0.02
NUP54-217ENST00000514987 ZNF789Q5FWF6 425 aa14.9□□□□□ -0.02
NUP54-217ENST00000514987 NADSYN1Q6IA69 706 aa14.9□□□□□ -0.02
NUP54-217ENST00000514987 CAPRIN2Q6IMN6 1127 aaKnown RBP14.9□□□□□ -0.02
NUP54-217ENST00000514987 ZFP1Q6P2D0 407 aa14.9□□□□□ -0.02
NUP54-217ENST00000514987 KLHDC10Q6PID8 442 aa14.9□□□□□ -0.02
NUP54-217ENST00000514987 CHSY3Q70JA7 882 aa14.9□□□□□ -0.02
NUP54-217ENST00000514987 RAB44Q7Z6P3 723 aaPredicted RBP14.9□□□□□ -0.02
NUP54-217ENST00000514987 HPS6Q86YV9 775 aa14.9□□□□□ -0.02
NUP54-217ENST00000514987 RNF135Q8IUD6 432 aa14.9□□□□□ -0.02
NUP54-217ENST00000514987 NPAS4Q8IUM7 802 aa14.9□□□□□ -0.02
NUP54-217ENST00000514987 SPATA6LQ8N4H0 392 aa14.9□□□□□ -0.02
NUP54-217ENST00000514987 PPP2R3CQ969Q6 453 aa14.9□□□□□ -0.02
NUP54-217ENST00000514987 SGF29Q96ES7 293 aa14.9□□□□□ -0.02
NUP54-217ENST00000514987 CATSPER2Q96P56 530 aa14.9□□□□□ -0.02
NUP54-217ENST00000514987 MGME1Q9BQP7 344 aa14.9□□□□□ -0.02
NUP54-217ENST00000514987 CFHR5Q9BXR6 569 aa14.9□□□□□ -0.02
NUP54-217ENST00000514987 ZDHHC7Q9NXF8 308 aa14.9□□□□□ -0.02
NUP54-217ENST00000514987 SCOCQ9UIL1 159 aa14.9□□□□□ -0.02
NUP54-217ENST00000514987 CLDN11O75508 207 aa14.9□□□□□ -0.02
NUP54-217ENST00000514987 VNN2O95498 520 aa14.9□□□□□ -0.02
NUP54-217ENST00000514987 PDHA1P08559 390 aa14.9□□□□□ -0.02
NUP54-217ENST00000514987 ACVRL1P37023 503 aa14.9□□□□□ -0.02
NUP54-217ENST00000514987 IRX1P78414 480 aaPredicted RBP14.9□□□□□ -0.02
NUP54-217ENST00000514987 DUSP4Q13115 394 aa14.9□□□□□ -0.02
NUP54-217ENST00000514987 SQLEQ14534 574 aa14.9□□□□□ -0.02
NUP54-217ENST00000514987 LHX8Q68G74 356 aa14.9□□□□□ -0.02
NUP54-217ENST00000514987 IZUMO2Q6UXV1 221 aa14.9□□□□□ -0.02
NUP54-217ENST00000514987 KBTBD6Q86V97 674 aa14.9□□□□□ -0.02
NUP54-217ENST00000514987 TMEM126BQ8IUX1 230 aa14.9□□□□□ -0.02
NUP54-217ENST00000514987 MFN1Q8IWA4 741 aa14.9□□□□□ -0.02
NUP54-217ENST00000514987 PELI3Q8N2H9 469 aa14.9□□□□□ -0.02
NUP54-217ENST00000514987 RHEBL1Q8TAI7 183 aa14.9□□□□□ -0.02
NUP54-217ENST00000514987 PLD4Q96BZ4 506 aa14.9□□□□□ -0.02
NUP54-217ENST00000514987 PSKH2Q96QS6 385 aa14.9□□□□□ -0.02
NUP54-217ENST00000514987 TCF12Q99081 682 aa14.9□□□□□ -0.02
NUP54-217ENST00000514987 MRPL1Q9BYD6 325 aaKnown RBP14.9□□□□□ -0.02
NUP54-217ENST00000514987 CCSER2Q9H7U1 834 aa14.9□□□□□ -0.02
NUP54-217ENST00000514987 HMX1Q9NP08 348 aaPredicted RBP14.9□□□□□ -0.02
NUP54-217ENST00000514987 CATSPERZQ9NTU4 200 aa14.9□□□□□ -0.02
NUP54-217ENST00000514987 C6orf203Q9P0P8 240 aaPredicted RBP14.9□□□□□ -0.02
NUP54-217ENST00000514987 COPG1Q9Y678 874 aaKnown RBP14.9□□□□□ -0.02
NUP54-217ENST00000514987 MRPL42Q9Y6G3 142 aaKnown RBP14.9□□□□□ -0.02
NUP54-217ENST00000514987 BUD23O43709 281 aaKnown RBP14.89□□□□□ -0.03
NUP54-217ENST00000514987 KDELR3O43731 214 aa14.89□□□□□ -0.03
NUP54-217ENST00000514987 ZMPSTE24O75844 475 aa14.89□□□□□ -0.03
NUP54-217ENST00000514987 SOAT2O75908 522 aa14.89□□□□□ -0.03
NUP54-217ENST00000514987 GOT2P00505 430 aaKnown RBP14.89□□□□□ -0.03
NUP54-217ENST00000514987 GALTP07902 379 aa14.89□□□□□ -0.03
NUP54-217ENST00000514987 SP100P23497 879 aaPredicted RBP14.89□□□□□ -0.03
NUP54-217ENST00000514987 PSMA3P25788 255 aa14.89□□□□□ -0.03
NUP54-217ENST00000514987 ATP4BP51164 291 aa14.89□□□□□ -0.03
NUP54-217ENST00000514987 ARSDP51689 593 aa14.89□□□□□ -0.03
NUP54-217ENST00000514987 CDKN2DP55273 166 aa14.89□□□□□ -0.03
NUP54-217ENST00000514987 CAP1Q01518 475 aa14.89□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms