RNA–Protein interactions for RNA: ENST00000514537.5

CLDND1-230, Transcript of claudin domain containing 1, humanhuman

TSL 3

Gene CLDND1, Length 1,013 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-230ENST00000514537 INPP5AQ14642 412 aa23.15■■□□□ 1.3
CLDND1-230ENST00000514537 HES3Q5TGS1 186 aa23.15■■□□□ 1.3
CLDND1-230ENST00000514537 PROSER1Q86XN7 944 aa23.15■■□□□ 1.3
CLDND1-230ENST00000514537 RHOT2Q8IXI1 618 aa23.15■■□□□ 1.3
CLDND1-230ENST00000514537 PHACTR4Q8IZ21 702 aa23.15■■□□□ 1.3
CLDND1-230ENST00000514537 RBFAQ8N0V3 343 aa23.15■■□□□ 1.3
CLDND1-230ENST00000514537 LMX1AQ8TE12 382 aa23.15■■□□□ 1.3
CLDND1-230ENST00000514537 RFFLQ8WZ73 363 aa23.15■■□□□ 1.3
CLDND1-230ENST00000514537 RAPGEF5Q92565 580 aa23.15■■□□□ 1.3
CLDND1-230ENST00000514537 TBATAQ96M53 351 aa23.15■■□□□ 1.3
CLDND1-230ENST00000514537 APOOQ9BUR5 198 aa23.15■■□□□ 1.3
CLDND1-230ENST00000514537 USP29Q9HBJ7 922 aa23.15■■□□□ 1.3
CLDND1-230ENST00000514537 TDRD6O60522 2096 aaKnown RBP23.15■■□□□ 1.3
CLDND1-230ENST00000514537 LY6G6EA0A0G2JKS1 128 aa23.14■■□□□ 1.29
CLDND1-230ENST00000514537 TPP1O14773 563 aa23.14■■□□□ 1.29
CLDND1-230ENST00000514537 ELFN1P0C7U0 828 aa23.14■■□□□ 1.29
CLDND1-230ENST00000514537 GM2AP17900 193 aa23.14■■□□□ 1.29
CLDND1-230ENST00000514537 KDELR1P24390 212 aa23.14■■□□□ 1.29
CLDND1-230ENST00000514537 HNF1BP35680 557 aa23.14■■□□□ 1.29
CLDND1-230ENST00000514537 PPARDQ03181 441 aa23.14■■□□□ 1.29
CLDND1-230ENST00000514537 TRAF2Q12933 501 aa23.14■■□□□ 1.29
CLDND1-230ENST00000514537 MTM1Q13496 603 aa23.14■■□□□ 1.29
CLDND1-230ENST00000514537 TIGD7Q6NT04 549 aaPredicted RBP23.14■■□□□ 1.29
CLDND1-230ENST00000514537 CACTIN-AS1Q8N1I8 211 aa23.14■■□□□ 1.29
CLDND1-230ENST00000514537 PDCD7Q8N8D1 485 aaKnown RBP23.14■■□□□ 1.29
CLDND1-230ENST00000514537 MAML1Q92585 1016 aa23.14■■□□□ 1.29
CLDND1-230ENST00000514537 FATE1Q969F0 183 aa23.14■■□□□ 1.29
CLDND1-230ENST00000514537 TSGA13Q96PP4 275 aa23.14■■□□□ 1.29
CLDND1-230ENST00000514537 TRIM5Q9C035 493 aa23.14■■□□□ 1.29
CLDND1-230ENST00000514537 NT5MQ9NPB1 228 aa23.14■■□□□ 1.29
CLDND1-230ENST00000514537 DKK4Q9UBT3 224 aa23.14■■□□□ 1.29
CLDND1-230ENST00000514537 B4GALT6Q9UBX8 382 aa23.14■■□□□ 1.29
CLDND1-230ENST00000514537 APOBEC3BQ9UH17 382 aaKnown RBP23.14■■□□□ 1.29
CLDND1-230ENST00000514537 INTUQ9ULD6 942 aa23.14■■□□□ 1.29
CLDND1-230ENST00000514537 PHTF1Q9UMS5 762 aa23.14■■□□□ 1.29
CLDND1-230ENST00000514537 U3KQA8 63 aa23.14■■□□□ 1.29
CLDND1-230ENST00000514537 MATN3O15232 486 aa23.13■■□□□ 1.29
CLDND1-230ENST00000514537 GCATO75600 419 aa23.13■■□□□ 1.29
CLDND1-230ENST00000514537 PCCBP05166 539 aa23.13■■□□□ 1.29
CLDND1-230ENST00000514537 MYF5P13349 255 aa23.13■■□□□ 1.29
CLDND1-230ENST00000514537 CCNCP24863 283 aa23.13■■□□□ 1.29
CLDND1-230ENST00000514537 NFATC4Q14934 902 aa23.13■■□□□ 1.29
CLDND1-230ENST00000514537 TCEAL1Q15170 157 aa23.13■■□□□ 1.29
CLDND1-230ENST00000514537 IFI16Q16666 785 aaKnown RBP23.13■■□□□ 1.29
CLDND1-230ENST00000514537 PRRT3Q5FWE3 981 aa23.13■■□□□ 1.29
CLDND1-230ENST00000514537 FAXCQ5TGI0 409 aa23.13■■□□□ 1.29
CLDND1-230ENST00000514537 ZCCHC8Q6NZY4 707 aaKnown RBP23.13■■□□□ 1.29
CLDND1-230ENST00000514537 PLA2G15Q8NCC3 412 aa23.13■■□□□ 1.29
CLDND1-230ENST00000514537 MDM1Q8TC05 714 aa23.13■■□□□ 1.29
CLDND1-230ENST00000514537 PDCD6IPQ8WUM4 868 aaKnown RBP23.13■■□□□ 1.29
CLDND1-230ENST00000514537 RNF157Q96PX1 679 aa23.13■■□□□ 1.29
CLDND1-230ENST00000514537 SLC13A1Q9BZW2 595 aa23.13■■□□□ 1.29
CLDND1-230ENST00000514537 SALL4Q9UJQ4 1053 aa23.13■■□□□ 1.29
CLDND1-230ENST00000514537 ZFHX4Q86UP3 3567 aa23.12■■□□□ 1.29
CLDND1-230ENST00000514537 A8MX80 341 aa23.12■■□□□ 1.29
CLDND1-230ENST00000514537 PGLSO95336 258 aa23.12■■□□□ 1.29
CLDND1-230ENST00000514537 MAP3K6O95382 1288 aa23.12■■□□□ 1.29
CLDND1-230ENST00000514537 CPP00450 1065 aa23.12■■□□□ 1.29
CLDND1-230ENST00000514537 HTR1BP28222 390 aa23.12■■□□□ 1.29
CLDND1-230ENST00000514537 DUSP3P51452 185 aaPredicted RBP23.12■■□□□ 1.29
CLDND1-230ENST00000514537 INSM1Q01101 510 aaPredicted RBP23.12■■□□□ 1.29
CLDND1-230ENST00000514537 GBE1Q04446 702 aa23.12■■□□□ 1.29
CLDND1-230ENST00000514537 SLC10A2Q12908 348 aaPredicted RBP23.12■■□□□ 1.29
CLDND1-230ENST00000514537 TARDBPQ13148 414 aaKnown RBP eCLIP23.12■■□□□ 1.29
CLDND1-230ENST00000514537 C1orf61Q13536 156 aa23.12■■□□□ 1.29
CLDND1-230ENST00000514537 DEFB133Q30KQ1 61 aa23.12■■□□□ 1.29
CLDND1-230ENST00000514537 ZFYVE27Q5T4F4 411 aa23.12■■□□□ 1.29
CLDND1-230ENST00000514537 CBARPQ8N350 705 aaPredicted RBP23.12■■□□□ 1.29
CLDND1-230ENST00000514537 TC2NQ8N9U0 490 aa23.12■■□□□ 1.29
CLDND1-230ENST00000514537 IL12RB2Q99665 862 aa23.12■■□□□ 1.29
CLDND1-230ENST00000514537 SEMA3CQ99985 751 aa23.12■■□□□ 1.29
CLDND1-230ENST00000514537 LRRC61Q9BV99 259 aa23.12■■□□□ 1.29
CLDND1-230ENST00000514537 POLR1EQ9GZS1 481 aaKnown RBP23.12■■□□□ 1.29
CLDND1-230ENST00000514537 OR1A2Q9Y585 309 aa23.12■■□□□ 1.29
CLDND1-230ENST00000514537 ZNF487B1APH4 448 aa23.11■■□□□ 1.29
CLDND1-230ENST00000514537 LMO7DNF2Z398 122 aa23.11■■□□□ 1.29
CLDND1-230ENST00000514537 GP1BAP07359 652 aa23.11■■□□□ 1.29
CLDND1-230ENST00000514537 MX2P20592 715 aa23.11■■□□□ 1.29
CLDND1-230ENST00000514537 NFKBIAP25963 317 aa23.11■■□□□ 1.29
CLDND1-230ENST00000514537 VIPR1P32241 457 aa23.11■■□□□ 1.29
CLDND1-230ENST00000514537 BLKP51451 505 aa23.11■■□□□ 1.29
CLDND1-230ENST00000514537 HK3P52790 923 aa23.11■■□□□ 1.29
CLDND1-230ENST00000514537 ALG11Q2TAA5 492 aa23.11■■□□□ 1.29
CLDND1-230ENST00000514537 ARMC12Q5T9G4 340 aa23.11■■□□□ 1.29
CLDND1-230ENST00000514537 ALG1LQ6GMV1 187 aa23.11■■□□□ 1.29
CLDND1-230ENST00000514537 ENPP7Q6UWV6 458 aa23.11■■□□□ 1.29
CLDND1-230ENST00000514537 VSIG1Q86XK7 387 aa23.11■■□□□ 1.29
CLDND1-230ENST00000514537 COQ10AQ96MF6 247 aa23.11■■□□□ 1.29
CLDND1-230ENST00000514537 CLPBQ9H078 707 aa23.11■■□□□ 1.29
CLDND1-230ENST00000514537 EVA1BQ9NVM1 165 aa23.11■■□□□ 1.29
CLDND1-230ENST00000514537 RBM22Q9NW64 420 aaKnown RBP eCLIP23.11■■□□□ 1.29
CLDND1-230ENST00000514537 DTLQ9NZJ0 730 aa23.11■■□□□ 1.29
CLDND1-230ENST00000514537 NCKIPSDQ9NZQ3 722 aa23.11■■□□□ 1.29
CLDND1-230ENST00000514537 AMACRQ9UHK6 382 aa23.11■■□□□ 1.29
CLDND1-230ENST00000514537 PPIL1Q9Y3C6 166 aa23.11■■□□□ 1.29
CLDND1-230ENST00000514537 RAI2Q9Y5P3 530 aa23.11■■□□□ 1.29
CLDND1-230ENST00000514537 ANKRD11Q6UB99 2663 aaPredicted RBP23.11■■□□□ 1.29
CLDND1-230ENST00000514537 APC2O95996 2303 aa23.1■■□□□ 1.29
CLDND1-230ENST00000514537 LRRD1A4D1F6 860 aa23.1■■□□□ 1.29
CLDND1-230ENST00000514537 C3orf70A6NLC5 250 aaPredicted RBP23.1■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms