RNA–Protein interactions for RNA: ENST00000514110.5

SNHG4-208, Transcript of small nucleolar RNA host gene 4, humanhuman

TSL 1 (best)

Gene SNHG4, Length 679 nt, Biotype retained intron, Subcellular localisation Nucleoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG4-208ENST00000514110 SERPINA4P29622 427 aa12.28□□□□□ -0.44
SNHG4-208ENST00000514110 MIPP30301 263 aa12.28□□□□□ -0.44
SNHG4-208ENST00000514110 UCNP55089 124 aa12.28□□□□□ -0.44
SNHG4-208ENST00000514110 MTM1Q13496 603 aa12.28□□□□□ -0.44
SNHG4-208ENST00000514110 PPP6R3Q5H9R7 873 aaPredicted RBP12.28□□□□□ -0.44
SNHG4-208ENST00000514110 E4F1Q66K89 784 aaPredicted RBP12.28□□□□□ -0.44
SNHG4-208ENST00000514110 LIPIQ6XZB0 460 aa12.28□□□□□ -0.44
SNHG4-208ENST00000514110 B3GNT8Q7Z7M8 397 aa12.28□□□□□ -0.44
SNHG4-208ENST00000514110 GKN2Q86XP6 184 aa12.28□□□□□ -0.44
SNHG4-208ENST00000514110 ZNF843Q8N446 348 aa12.28□□□□□ -0.44
SNHG4-208ENST00000514110 WDR36Q8NI36 951 aaKnown RBP12.28□□□□□ -0.44
SNHG4-208ENST00000514110 WDR48Q8TAF3 677 aa12.28□□□□□ -0.44
SNHG4-208ENST00000514110 SCG3Q8WXD2 468 aaKnown RBP12.28□□□□□ -0.44
SNHG4-208ENST00000514110 OR1E3Q8WZA6 343 aa12.28□□□□□ -0.44
SNHG4-208ENST00000514110 ECHDC3Q96DC8 303 aa12.28□□□□□ -0.44
SNHG4-208ENST00000514110 PDXPQ96GD0 296 aa12.28□□□□□ -0.44
SNHG4-208ENST00000514110 WDR92Q96MX6 357 aa12.28□□□□□ -0.44
SNHG4-208ENST00000514110 GBP4Q96PP9 640 aa12.28□□□□□ -0.44
SNHG4-208ENST00000514110 RBM15Q96T37 977 aaKnown RBP eCLIP12.28□□□□□ -0.441e-8■■■■■ 27.9
SNHG4-208ENST00000514110 EIF3CQ99613 913 aaKnown RBP12.28□□□□□ -0.44
SNHG4-208ENST00000514110 HAUS4Q9H6D7 363 aa12.28□□□□□ -0.44
SNHG4-208ENST00000514110 KLQ9UEF7 1012 aa12.28□□□□□ -0.44
SNHG4-208ENST00000514110 SSUH2Q9Y2M2 353 aa12.28□□□□□ -0.44
SNHG4-208ENST00000514110 CCDC187A0A096LP49 1063 aa12.27□□□□□ -0.45
SNHG4-208ENST00000514110 A0A1W2PQM1 296 aa12.27□□□□□ -0.45
SNHG4-208ENST00000514110 TTC24A2A3L6 582 aaPredicted RBP12.27□□□□□ -0.45
SNHG4-208ENST00000514110 CFAP69A5D8W1 941 aa12.27□□□□□ -0.45
SNHG4-208ENST00000514110 TMEM202A6NGA9 273 aa12.27□□□□□ -0.45
SNHG4-208ENST00000514110 A8MX80 341 aa12.27□□□□□ -0.45
SNHG4-208ENST00000514110 ERVH48-1M5A8F1 160 aa12.27□□□□□ -0.45
SNHG4-208ENST00000514110 TRAFD1O14545 582 aaPredicted RBP12.27□□□□□ -0.45
SNHG4-208ENST00000514110 PRPSAP2O60256 369 aa12.27□□□□□ -0.45
SNHG4-208ENST00000514110 TNFSF15O95150 251 aa12.27□□□□□ -0.45
SNHG4-208ENST00000514110 TNFP01375 233 aa12.27□□□□□ -0.45
SNHG4-208ENST00000514110 FTLP02792 175 aaPredicted RBP12.27□□□□□ -0.45
SNHG4-208ENST00000514110 ANP32AP39687 249 aaKnown RBP12.27□□□□□ -0.45
SNHG4-208ENST00000514110 CCL7P80098 99 aa12.27□□□□□ -0.45
SNHG4-208ENST00000514110 TYRO3Q06418 890 aa12.27□□□□□ -0.45
SNHG4-208ENST00000514110 BCL2L1Q07817 233 aa12.27□□□□□ -0.45
SNHG4-208ENST00000514110 ASIC2Q16515 512 aa12.27□□□□□ -0.45
SNHG4-208ENST00000514110 KIF26BQ2KJY2 2108 aa12.27□□□□□ -0.45
SNHG4-208ENST00000514110 PPP1R2P3Q6NXS1 205 aa12.27□□□□□ -0.45
SNHG4-208ENST00000514110 ZNF571Q7Z3V5 609 aaPredicted RBP12.27□□□□□ -0.45
SNHG4-208ENST00000514110 CLEC14AQ86T13 490 aa12.27□□□□□ -0.45
SNHG4-208ENST00000514110 SFTPA2Q8IWL1 248 aa12.27□□□□□ -0.45
SNHG4-208ENST00000514110 SDR16C5Q8N3Y7 309 aa12.27□□□□□ -0.45
SNHG4-208ENST00000514110 ARL14Q8N4G2 192 aa12.27□□□□□ -0.45
SNHG4-208ENST00000514110 FUBP1Q96AE4 644 aaKnown RBP12.27□□□□□ -0.45
SNHG4-208ENST00000514110 CINPQ9BW66 212 aaPredicted RBP12.27□□□□□ -0.45
SNHG4-208ENST00000514110 SP110Q9HB58 689 aa12.27□□□□□ -0.45
SNHG4-208ENST00000514110 FGF22Q9HCT0 170 aa12.27□□□□□ -0.45
SNHG4-208ENST00000514110 MRPL40Q9NQ50 206 aaKnown RBP12.27□□□□□ -0.45
SNHG4-208ENST00000514110 CWC15Q9P013 229 aaKnown RBP12.27□□□□□ -0.45
SNHG4-208ENST00000514110 DGKBQ9Y6T7 804 aa12.27□□□□□ -0.45
SNHG4-208ENST00000514110 D6RAR5 112 aa12.26□□□□□ -0.45
SNHG4-208ENST00000514110 DDX3XO00571 662 aaKnown RBP eCLIP12.26□□□□□ -0.454e-14■□□□□ 10.9
SNHG4-208ENST00000514110 LRCH4O75427 683 aa12.26□□□□□ -0.45
SNHG4-208ENST00000514110 RNF8O76064 485 aa12.26□□□□□ -0.45
SNHG4-208ENST00000514110 ZIC2O95409 532 aaPredicted RBP12.26□□□□□ -0.45
SNHG4-208ENST00000514110 RPLP0P05388 317 aaKnown RBP12.26□□□□□ -0.45
SNHG4-208ENST00000514110 ELFN1P0C7U0 828 aa12.26□□□□□ -0.45
SNHG4-208ENST00000514110 GZMAP12544 262 aa12.26□□□□□ -0.45
SNHG4-208ENST00000514110 HCAR3P49019 387 aa12.26□□□□□ -0.45
SNHG4-208ENST00000514110 SCNN1BP51168 640 aa12.26□□□□□ -0.45
SNHG4-208ENST00000514110 KIAA1024LP59773 190 aa12.26□□□□□ -0.45
SNHG4-208ENST00000514110 RHDQ02161 417 aa12.26□□□□□ -0.45
SNHG4-208ENST00000514110 CFHR1Q03591 330 aa12.26□□□□□ -0.45
SNHG4-208ENST00000514110 IL10RBQ08334 325 aa12.26□□□□□ -0.45
SNHG4-208ENST00000514110 VAC14Q08AM6 782 aa12.26□□□□□ -0.45
SNHG4-208ENST00000514110 NSUN2Q08J23 767 aaKnown RBP eCLIP12.26□□□□□ -0.45
SNHG4-208ENST00000514110 SLC10A7Q0GE19 358 aa12.26□□□□□ -0.45
SNHG4-208ENST00000514110 DPYSQ14117 519 aa12.26□□□□□ -0.45
SNHG4-208ENST00000514110 RFTN1Q14699 578 aaPredicted RBP12.26□□□□□ -0.45
SNHG4-208ENST00000514110 ANO6Q4KMQ2 910 aa12.26□□□□□ -0.45
SNHG4-208ENST00000514110 TAF1BQ53T94 588 aaPredicted RBP12.26□□□□□ -0.45
SNHG4-208ENST00000514110 CCDC183Q5T5S1 534 aa12.26□□□□□ -0.45
SNHG4-208ENST00000514110 DPPA4Q7L190 304 aa12.26□□□□□ -0.45
SNHG4-208ENST00000514110 PELI3Q8N2H9 469 aa12.26□□□□□ -0.45
SNHG4-208ENST00000514110 GPR156Q8NFN8 814 aa12.26□□□□□ -0.45
SNHG4-208ENST00000514110 OR56A4Q8NGH8 313 aa12.26□□□□□ -0.45
SNHG4-208ENST00000514110 ATL2Q8NHH9 583 aa12.26□□□□□ -0.45
SNHG4-208ENST00000514110 FNIP1Q8TF40 1166 aa12.26□□□□□ -0.45
SNHG4-208ENST00000514110 SNRNP27Q8WVK2 155 aaKnown RBP12.26□□□□□ -0.45
SNHG4-208ENST00000514110 LIN37Q96GY3 246 aaPredicted RBP12.26□□□□□ -0.45
SNHG4-208ENST00000514110 GFM1Q96RP9 751 aaKnown RBP12.26□□□□□ -0.45
SNHG4-208ENST00000514110 LGR4Q9BXB1 951 aa12.26□□□□□ -0.45
SNHG4-208ENST00000514110 FOXP3Q9BZS1 431 aa12.26□□□□□ -0.45
SNHG4-208ENST00000514110 EPB41L5Q9HCM4 733 aa12.26□□□□□ -0.45
SNHG4-208ENST00000514110 CNOT8Q9UFF9 292 aaKnown RBP12.26□□□□□ -0.45
SNHG4-208ENST00000514110 CFAP46Q8IYW2 2715 aa12.26□□□□□ -0.45
SNHG4-208ENST00000514110 CACNB4O00305 520 aaPredicted RBP12.25□□□□□ -0.45
SNHG4-208ENST00000514110 PLD2O14939 933 aa12.25□□□□□ -0.45
SNHG4-208ENST00000514110 NOBOXO60393 691 aa12.25□□□□□ -0.45
SNHG4-208ENST00000514110 ITGA2BP08514 1039 aa12.25□□□□□ -0.45
SNHG4-208ENST00000514110 HOXC4P09017 264 aaPredicted RBP12.25□□□□□ -0.45
SNHG4-208ENST00000514110 TCF4P15884 667 aa12.25□□□□□ -0.45
SNHG4-208ENST00000514110 IL1R2P27930 398 aa12.25□□□□□ -0.45
SNHG4-208ENST00000514110 TRIM23P36406 574 aa12.25□□□□□ -0.45
SNHG4-208ENST00000514110 PRKCIP41743 596 aa12.25□□□□□ -0.45
SNHG4-208ENST00000514110 AP1S1P61966 158 aa12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms