RNA–Protein interactions for RNA: ENST00000513367.1

SRPK1-213, Transcript of SRSF protein kinase 1, humanhuman

TSL 2

Gene SRPK1, Length 634 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRPK1-213ENST00000513367 RAB34Q9BZG1 259 aa6.27□□□□□ -1.41
SRPK1-213ENST00000513367 CLPBQ9H078 707 aa6.27□□□□□ -1.41
SRPK1-213ENST00000513367 PCIF1Q9H4Z3 704 aa6.27□□□□□ -1.41
SRPK1-213ENST00000513367 GPR27Q9NS67 375 aa6.27□□□□□ -1.41
SRPK1-213ENST00000513367 AKAP7Q9P0M2 348 aaPredicted RBP6.27□□□□□ -1.41
SRPK1-213ENST00000513367 APOBEC3BQ9UH17 382 aaKnown RBP6.27□□□□□ -1.41
SRPK1-213ENST00000513367 STRIP2Q9ULQ0 834 aa6.27□□□□□ -1.41
SRPK1-213ENST00000513367 ZFR2Q9UPR6 939 aaKnown RBP6.27□□□□□ -1.41
SRPK1-213ENST00000513367 KIF3AQ9Y496 699 aa6.27□□□□□ -1.41
SRPK1-213ENST00000513367 CEP83Q9Y592 693 aa6.27□□□□□ -1.41
SRPK1-213ENST00000513367 HS3ST3A1Q9Y663 406 aa6.27□□□□□ -1.41
SRPK1-213ENST00000513367 MRPS18BQ9Y676 258 aaKnown RBP6.27□□□□□ -1.41
SRPK1-213ENST00000513367 ARHGEF17Q96PE2 2063 aaPredicted RBP6.27□□□□□ -1.41
SRPK1-213ENST00000513367 ITIH6Q6UXX5 1313 aa6.26□□□□□ -1.41
SRPK1-213ENST00000513367 RAD51BO15315 384 aa6.26□□□□□ -1.41
SRPK1-213ENST00000513367 CDC45O75419 566 aa6.26□□□□□ -1.41
SRPK1-213ENST00000513367 PAGE1O75459 146 aa6.26□□□□□ -1.41
SRPK1-213ENST00000513367 RFPL1O75677 317 aa6.26□□□□□ -1.41
SRPK1-213ENST00000513367 FAM155BO75949 473 aa6.26□□□□□ -1.41
SRPK1-213ENST00000513367 PCDH8O95206 1070 aa6.26□□□□□ -1.41
SRPK1-213ENST00000513367 CBX6O95503 412 aa6.26□□□□□ -1.41
SRPK1-213ENST00000513367 KRT18P05783 430 aaKnown RBP6.26□□□□□ -1.41
SRPK1-213ENST00000513367 C8BP07358 591 aa6.26□□□□□ -1.41
SRPK1-213ENST00000513367 SRPRAP08240 638 aaKnown RBP6.26□□□□□ -1.41
SRPK1-213ENST00000513367 TSHRP16473 764 aa6.26□□□□□ -1.41
SRPK1-213ENST00000513367 DDIT3P35638 169 aa6.26□□□□□ -1.41
SRPK1-213ENST00000513367 RECQLP46063 649 aaPredicted RBP6.26□□□□□ -1.41
SRPK1-213ENST00000513367 ECT2LQ008S8 904 aa6.26□□□□□ -1.41
SRPK1-213ENST00000513367 MC1RQ01726 317 aa6.26□□□□□ -1.41
SRPK1-213ENST00000513367 GUCY1B3Q02153 619 aa6.26□□□□□ -1.41
SRPK1-213ENST00000513367 ORC2Q13416 577 aaPredicted RBP6.26□□□□□ -1.41
SRPK1-213ENST00000513367 TRIM29Q14134 588 aa6.26□□□□□ -1.41
SRPK1-213ENST00000513367 SMTNL2Q2TAL5 461 aa6.26□□□□□ -1.41
SRPK1-213ENST00000513367 ZRANB3Q5FWF4 1079 aa6.26□□□□□ -1.41
SRPK1-213ENST00000513367 PITRM1Q5JRX3 1037 aa6.26□□□□□ -1.41
SRPK1-213ENST00000513367 ADGRF1Q5T601 910 aa6.26□□□□□ -1.41
SRPK1-213ENST00000513367 FAM46CQ5VWP2 391 aa6.26□□□□□ -1.41
SRPK1-213ENST00000513367 RNF219Q5W0B1 726 aaPredicted RBP6.26□□□□□ -1.41
SRPK1-213ENST00000513367 LRFN4Q6PJG9 635 aa6.26□□□□□ -1.41
SRPK1-213ENST00000513367 KYAT3Q6YP21 454 aaKnown RBP6.26□□□□□ -1.41
SRPK1-213ENST00000513367 TRAPPC11Q7Z392 1133 aa6.26□□□□□ -1.41
SRPK1-213ENST00000513367 MFN1Q8IWA4 741 aa6.26□□□□□ -1.41
SRPK1-213ENST00000513367 PHACTR4Q8IZ21 702 aa6.26□□□□□ -1.41
SRPK1-213ENST00000513367 CARNMT1Q8N4J0 409 aa6.26□□□□□ -1.41
SRPK1-213ENST00000513367 ARL10Q8N8L6 244 aa6.26□□□□□ -1.41
SRPK1-213ENST00000513367 C12orf29Q8N999 325 aa6.26□□□□□ -1.41
SRPK1-213ENST00000513367 RCBTB1Q8NDN9 531 aa6.26□□□□□ -1.41
SRPK1-213ENST00000513367 BTN2A2Q8WVV5 523 aa6.26□□□□□ -1.41
SRPK1-213ENST00000513367 ART4Q93070 314 aa6.26□□□□□ -1.41
SRPK1-213ENST00000513367 ELMO3Q96BJ8 720 aa6.26□□□□□ -1.41
SRPK1-213ENST00000513367 TNIP3Q96KP6 325 aa6.26□□□□□ -1.41
SRPK1-213ENST00000513367 SPAG5Q96R06 1193 aa6.26□□□□□ -1.41
SRPK1-213ENST00000513367 CDK5RAP1Q96SZ6 601 aaKnown RBP6.26□□□□□ -1.41
SRPK1-213ENST00000513367 SMYD3Q9H7B4 428 aa6.26□□□□□ -1.41
SRPK1-213ENST00000513367 LUC7LQ9NQ29 371 aaKnown RBP6.26□□□□□ -1.41
SRPK1-213ENST00000513367 FAM49BQ9NUQ9 324 aa6.26□□□□□ -1.41
SRPK1-213ENST00000513367 CLIC5Q9NZA1 410 aa6.26□□□□□ -1.41
SRPK1-213ENST00000513367 PNMA8BQ9ULN7 279 aaPredicted RBP6.26□□□□□ -1.41
SRPK1-213ENST00000513367 NAALADL1Q9UQQ1 740 aa6.26□□□□□ -1.41
SRPK1-213ENST00000513367 PCDHGA3Q9Y5H0 932 aa6.26□□□□□ -1.41
SRPK1-213ENST00000513367 PCDHA5Q9Y5H7 936 aa6.26□□□□□ -1.41
SRPK1-213ENST00000513367 ACANP16112 2415 aa6.26□□□□□ -1.41
SRPK1-213ENST00000513367 MN1Q10571 1320 aaPredicted RBP6.25□□□□□ -1.41
SRPK1-213ENST00000513367 DNAJB5O75953 348 aa6.25□□□□□ -1.41
SRPK1-213ENST00000513367 KIF20AO95235 890 aa6.25□□□□□ -1.41
SRPK1-213ENST00000513367 PAK4O96013 591 aaPredicted RBP6.25□□□□□ -1.41
SRPK1-213ENST00000513367 FAM200BP0CF97 657 aa6.25□□□□□ -1.41
SRPK1-213ENST00000513367 ZNF18P17022 549 aa6.25□□□□□ -1.41
SRPK1-213ENST00000513367 PDCP20941 246 aa6.25□□□□□ -1.41
SRPK1-213ENST00000513367 ABCD1P33897 745 aa6.25□□□□□ -1.41
SRPK1-213ENST00000513367 RABIFP47224 123 aa6.25□□□□□ -1.41
SRPK1-213ENST00000513367 KIF11P52732 1056 aa6.25□□□□□ -1.41
SRPK1-213ENST00000513367 ZNF445P59923 1031 aa6.25□□□□□ -1.41
SRPK1-213ENST00000513367 RNASE9P60153 205 aaKnown RBP6.25□□□□□ -1.41
SRPK1-213ENST00000513367 ERV3-1Q14264 604 aa6.25□□□□□ -1.41
SRPK1-213ENST00000513367 ZRSR2Q15696 482 aaKnown RBP6.25□□□□□ -1.41
SRPK1-213ENST00000513367 FSCBQ5H9T9 825 aa6.25□□□□□ -1.41
SRPK1-213ENST00000513367 HYIQ5T013 277 aa6.25□□□□□ -1.41
SRPK1-213ENST00000513367 PIP5KL1Q5T9C9 394 aa6.25□□□□□ -1.41
SRPK1-213ENST00000513367 FAXCQ5TGI0 409 aa6.25□□□□□ -1.41
SRPK1-213ENST00000513367 PIK3R6Q5UE93 754 aa6.25□□□□□ -1.41
SRPK1-213ENST00000513367 PRAMEF13Q5VWM6 474 aa6.25□□□□□ -1.41
SRPK1-213ENST00000513367 NEK5Q6P3R8 708 aa6.25□□□□□ -1.41
SRPK1-213ENST00000513367 SCARA5Q6ZMJ2 495 aa6.25□□□□□ -1.41
SRPK1-213ENST00000513367 CLEC20AQ6ZU45 233 aa6.25□□□□□ -1.41
SRPK1-213ENST00000513367 CCDC186Q7Z3E2 898 aa6.25□□□□□ -1.41
SRPK1-213ENST00000513367 KDELC2Q7Z4H8 507 aa6.25□□□□□ -1.41
SRPK1-213ENST00000513367 TMEM135Q86UB9 458 aa6.25□□□□□ -1.41
SRPK1-213ENST00000513367 APCDD1Q8J025 514 aa6.25□□□□□ -1.41
SRPK1-213ENST00000513367 NLGN4XQ8N0W4 816 aa6.25□□□□□ -1.41
SRPK1-213ENST00000513367 GLIS1Q8NBF1 620 aa6.25□□□□□ -1.41
SRPK1-213ENST00000513367 SLC16A11Q8NCK7 471 aa6.25□□□□□ -1.41
SRPK1-213ENST00000513367 NLGN4YQ8NFZ3 816 aaPredicted RBP6.25□□□□□ -1.41
SRPK1-213ENST00000513367 PCDH19Q8TAB3 1148 aa6.25□□□□□ -1.41
SRPK1-213ENST00000513367 FIBINQ8TAL6 211 aa6.25□□□□□ -1.41
SRPK1-213ENST00000513367 PIWIL2Q8TC59 973 aaKnown RBP6.25□□□□□ -1.41
SRPK1-213ENST00000513367 OR8D1Q8WZ84 308 aa6.25□□□□□ -1.41
SRPK1-213ENST00000513367 CDK5RAP3Q96JB5 506 aa6.25□□□□□ -1.41
SRPK1-213ENST00000513367 RANBP9Q96S59 729 aa6.25□□□□□ -1.41
SRPK1-213ENST00000513367 CBWD1Q9BRT8 395 aa6.25□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms