RNA–Protein interactions for RNA: ENST00000513143.5

PDPN-210, Transcript of podoplanin, humanhuman

TSL 1 (best) BASIC

Gene PDPN, Length 1,305 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-210ENST00000513143 CLCN5P51795 746 aa12.59□□□□□ -0.39
PDPN-210ENST00000513143 NEK3P51956 506 aa12.59□□□□□ -0.39
PDPN-210ENST00000513143 DHX9Q08211 1270 aaKnown RBP12.59□□□□□ -0.39
PDPN-210ENST00000513143 MTAPQ13126 283 aa12.59□□□□□ -0.39
PDPN-210ENST00000513143 DNAJC21Q5F1R6 531 aaKnown RBP12.59□□□□□ -0.39
PDPN-210ENST00000513143 CERCAMQ5T4B2 595 aa12.59□□□□□ -0.39
PDPN-210ENST00000513143 ARMC3Q5W041 872 aa12.59□□□□□ -0.39
PDPN-210ENST00000513143 FBXL19Q6PCT2 694 aa12.59□□□□□ -0.39
PDPN-210ENST00000513143 USP45Q70EL2 814 aa12.59□□□□□ -0.39
PDPN-210ENST00000513143 CENPUQ71F23 418 aa12.59□□□□□ -0.39
PDPN-210ENST00000513143 ERN2Q76MJ5 926 aaKnown RBP12.59□□□□□ -0.39
PDPN-210ENST00000513143 TTC7BQ86TV6 843 aa12.59□□□□□ -0.39
PDPN-210ENST00000513143 AGGF1Q8N302 714 aaeCLIP12.59□□□□□ -0.39
PDPN-210ENST00000513143 AADATQ8N5Z0 425 aa12.59□□□□□ -0.39
PDPN-210ENST00000513143 RAB7BQ96AH8 199 aa12.59□□□□□ -0.39
PDPN-210ENST00000513143 FAM131CQ96AQ9 280 aa12.59□□□□□ -0.39
PDPN-210ENST00000513143 LRRC39Q96DD0 335 aa12.59□□□□□ -0.39
PDPN-210ENST00000513143 SIPA1Q96FS4 1042 aa12.59□□□□□ -0.39
PDPN-210ENST00000513143 SIGLEC10Q96LC7 697 aa12.59□□□□□ -0.39
PDPN-210ENST00000513143 SMIM14Q96QK8 99 aa12.59□□□□□ -0.39
PDPN-210ENST00000513143 LYSMD1Q96S90 227 aa12.59□□□□□ -0.39
PDPN-210ENST00000513143 SRPK1Q96SB4 655 aaKnown RBP12.59□□□□□ -0.39
PDPN-210ENST00000513143 IL22Q9GZX6 179 aa12.59□□□□□ -0.39
PDPN-210ENST00000513143 SLC6A17Q9H1V8 727 aa12.59□□□□□ -0.39
PDPN-210ENST00000513143 PABPC3Q9H361 631 aaKnown RBP12.59□□□□□ -0.39
PDPN-210ENST00000513143 HACD3Q9P035 362 aa12.59□□□□□ -0.39
PDPN-210ENST00000513143 PLK4O00444 970 aa12.58□□□□□ -0.4
PDPN-210ENST00000513143 ALDH1A2O94788 518 aa12.58□□□□□ -0.4
PDPN-210ENST00000513143 ALPIP09923 528 aa12.58□□□□□ -0.4
PDPN-210ENST00000513143 FAM153BP0C7A2 387 aa12.58□□□□□ -0.4
PDPN-210ENST00000513143 PIRTP0C851 137 aa12.58□□□□□ -0.4
PDPN-210ENST00000513143 ADRB3P13945 408 aa12.58□□□□□ -0.4
PDPN-210ENST00000513143 CTPS1P17812 591 aa12.58□□□□□ -0.4
PDPN-210ENST00000513143 XPAP23025 273 aaPredicted RBP12.58□□□□□ -0.4
PDPN-210ENST00000513143 NFKBIAP25963 317 aa12.58□□□□□ -0.4
PDPN-210ENST00000513143 HNF1BP35680 557 aa12.58□□□□□ -0.4
PDPN-210ENST00000513143 P2RY2P41231 377 aa12.58□□□□□ -0.4
PDPN-210ENST00000513143 ABL2P42684 1182 aa12.58□□□□□ -0.4
PDPN-210ENST00000513143 CCDC15Q0P6D6 951 aa12.58□□□□□ -0.4
PDPN-210ENST00000513143 CNTN1Q12860 1018 aa12.58□□□□□ -0.4
PDPN-210ENST00000513143 SFSWAPQ12872 951 aaKnown RBP12.58□□□□□ -0.4
PDPN-210ENST00000513143 PDIA2Q13087 525 aaKnown RBP12.58□□□□□ -0.4
PDPN-210ENST00000513143 MTM1Q13496 603 aa12.58□□□□□ -0.4
PDPN-210ENST00000513143 PTPRRQ15256 657 aa12.58□□□□□ -0.4
PDPN-210ENST00000513143 CDKN3Q16667 212 aa12.58□□□□□ -0.4
PDPN-210ENST00000513143 BBS9Q3SYG4 887 aa12.58□□□□□ -0.4
PDPN-210ENST00000513143 FAM153CQ494X1 144 aa12.58□□□□□ -0.4
PDPN-210ENST00000513143 TTC31Q49AM3 519 aaPredicted RBP12.58□□□□□ -0.4
PDPN-210ENST00000513143 PIP5KL1Q5T9C9 394 aa12.58□□□□□ -0.4
PDPN-210ENST00000513143 CEP128Q6ZU80 1094 aa12.58□□□□□ -0.4
PDPN-210ENST00000513143 USP30Q70CQ3 517 aa12.58□□□□□ -0.4
PDPN-210ENST00000513143 CACUL1Q86Y37 369 aa12.58□□□□□ -0.4
PDPN-210ENST00000513143 RELL1Q8IUW5 271 aa12.58□□□□□ -0.4
PDPN-210ENST00000513143 GSPT2Q8IYD1 628 aaKnown RBP12.58□□□□□ -0.4
PDPN-210ENST00000513143 HDDC3Q8N4P3 179 aa12.58□□□□□ -0.4
PDPN-210ENST00000513143 TSTD1Q8NFU3 115 aa12.58□□□□□ -0.4
PDPN-210ENST00000513143 BRSK1Q8TDC3 778 aa12.58□□□□□ -0.4
PDPN-210ENST00000513143 HMGB4Q8WW32 186 aa12.58□□□□□ -0.4
PDPN-210ENST00000513143 RANBP9Q96S59 729 aa12.58□□□□□ -0.4
PDPN-210ENST00000513143 TRABDQ9H4I3 376 aa12.58□□□□□ -0.4
PDPN-210ENST00000513143 PCDH12Q9NPG4 1184 aa12.58□□□□□ -0.4
PDPN-210ENST00000513143 SYBUQ9NX95 663 aa12.58□□□□□ -0.4
PDPN-210ENST00000513143 SPO11Q9Y5K1 396 aa12.58□□□□□ -0.4
PDPN-210ENST00000513143 TEX264Q9Y6I9 313 aa12.58□□□□□ -0.4
PDPN-210ENST00000513143 CACNA1IQ9P0X4 2223 aa12.57□□□□□ -0.4
PDPN-210ENST00000513143 LRRK1Q38SD2 2015 aa12.57□□□□□ -0.4
PDPN-210ENST00000513143 A0A1W2PP55 124 aa12.57□□□□□ -0.4
PDPN-210ENST00000513143 MAGEB16A2A368 324 aa12.57□□□□□ -0.4
PDPN-210ENST00000513143 NPIPB15A6NHN6 443 aaPredicted RBP12.57□□□□□ -0.4
PDPN-210ENST00000513143 AREL1O15033 823 aa12.57□□□□□ -0.4
PDPN-210ENST00000513143 SLC7A4O43246 635 aa12.57□□□□□ -0.4
PDPN-210ENST00000513143 SPINT1O43278 529 aa12.57□□□□□ -0.4
PDPN-210ENST00000513143 BANF1O75531 89 aa12.57□□□□□ -0.4
PDPN-210ENST00000513143 PAPSS2O95340 614 aaPredicted RBP12.57□□□□□ -0.4
PDPN-210ENST00000513143 PRKCGP05129 697 aa12.57□□□□□ -0.4
PDPN-210ENST00000513143 ACADMP11310 421 aa12.57□□□□□ -0.4
PDPN-210ENST00000513143 CYP2A6P11509 494 aaPredicted RBP12.57□□□□□ -0.4
PDPN-210ENST00000513143 ADRA1DP25100 572 aa12.57□□□□□ -0.4
PDPN-210ENST00000513143 VIPR1P32241 457 aa12.57□□□□□ -0.4
PDPN-210ENST00000513143 CXCL12P48061 93 aa12.57□□□□□ -0.4
PDPN-210ENST00000513143 CCR3P51677 355 aa12.57□□□□□ -0.4
PDPN-210ENST00000513143 CRADDP78560 199 aa12.57□□□□□ -0.4
PDPN-210ENST00000513143 LAMB3Q13751 1172 aa12.57□□□□□ -0.4
PDPN-210ENST00000513143 POU6F1Q14863 301 aa12.57□□□□□ -0.4
PDPN-210ENST00000513143 LRRC73Q5JTD7 316 aa12.57□□□□□ -0.4
PDPN-210ENST00000513143 PCID2Q5JVF3 399 aa12.57□□□□□ -0.4
PDPN-210ENST00000513143 AGBL4Q5VU57 503 aa12.57□□□□□ -0.4
PDPN-210ENST00000513143 DENND2CQ68D51 928 aa12.57□□□□□ -0.4
PDPN-210ENST00000513143 ERAP2Q6P179 960 aa12.57□□□□□ -0.4
PDPN-210ENST00000513143 CRTC1Q6UUV9 634 aa12.57□□□□□ -0.4
PDPN-210ENST00000513143 KIAA1324Q6UXG2 1013 aaKnown RBP12.57□□□□□ -0.4
PDPN-210ENST00000513143 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP12.57□□□□□ -0.4
PDPN-210ENST00000513143 DPPA4Q7L190 304 aa12.57□□□□□ -0.4
PDPN-210ENST00000513143 BMP8AQ7Z5Y6 402 aa12.57□□□□□ -0.4
PDPN-210ENST00000513143 RASSF3Q86WH2 238 aa12.57□□□□□ -0.4
PDPN-210ENST00000513143 CCDC25Q86WR0 208 aa12.57□□□□□ -0.4
PDPN-210ENST00000513143 MPP5Q8N3R9 675 aa12.57□□□□□ -0.4
PDPN-210ENST00000513143 CAMKK1Q8N5S9 505 aa12.57□□□□□ -0.4
PDPN-210ENST00000513143 MDGA1Q8NFP4 955 aa12.57□□□□□ -0.4
PDPN-210ENST00000513143 BLOC1S5Q8TDH9 187 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms