RNA–Protein interactions for RNA: ENST00000512844.5

CHD1-209, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 5

Gene CHD1, Length 848 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-209ENST00000512844 ERVK-11Q9UQG0 969 aa5.48□□□□□ -1.53
CHD1-209ENST00000512844 UTYO14607 1347 aa5.48□□□□□ -1.53
CHD1-209ENST00000512844 ZIC3O60481 467 aa5.47□□□□□ -1.53
CHD1-209ENST00000512844 GAGE7O76087 117 aa5.47□□□□□ -1.53
CHD1-209ENST00000512844 HOXB5P09067 269 aa5.47□□□□□ -1.53
CHD1-209ENST00000512844 GAGE12FP0CL80 117 aa5.47□□□□□ -1.53
CHD1-209ENST00000512844 GAGE12GP0CL81 117 aa5.47□□□□□ -1.53
CHD1-209ENST00000512844 GAGE12IP0CL82 117 aa5.47□□□□□ -1.53
CHD1-209ENST00000512844 ITGB8P26012 769 aa5.47□□□□□ -1.53
CHD1-209ENST00000512844 CPOXP36551 454 aa5.47□□□□□ -1.53
CHD1-209ENST00000512844 HARS2P49590 506 aaKnown RBP5.47□□□□□ -1.53
CHD1-209ENST00000512844 TUBA1BP68363 451 aa5.47□□□□□ -1.53
CHD1-209ENST00000512844 DDR1Q08345 913 aa5.47□□□□□ -1.53
CHD1-209ENST00000512844 GOLGA8DPQ0D2H9 430 aa5.47□□□□□ -1.53
CHD1-209ENST00000512844 PTP4A2Q12974 167 aa5.47□□□□□ -1.53
CHD1-209ENST00000512844 GAGE1Q13065 139 aa5.47□□□□□ -1.53
CHD1-209ENST00000512844 GAGE4Q13068 117 aa5.47□□□□□ -1.53
CHD1-209ENST00000512844 G3BP1Q13283 466 aaKnown RBP eCLIP5.47□□□□□ -1.53
CHD1-209ENST00000512844 PPP6R3Q5H9R7 873 aaPredicted RBP5.47□□□□□ -1.53
CHD1-209ENST00000512844 LINGO2Q7L985 606 aa5.47□□□□□ -1.53
CHD1-209ENST00000512844 DHX40Q8IX18 779 aaKnown RBP5.47□□□□□ -1.53
CHD1-209ENST00000512844 PPM1MQ96MI6 270 aa5.47□□□□□ -1.53
CHD1-209ENST00000512844 NAP1L4Q99733 375 aaKnown RBP5.47□□□□□ -1.53
CHD1-209ENST00000512844 LBHD1Q9BQE6 289 aaPredicted RBP5.47□□□□□ -1.53
CHD1-209ENST00000512844 NFE2L3Q9Y4A8 694 aa5.47□□□□□ -1.53
CHD1-209ENST00000512844 LSM4Q9Y4Z0 139 aaKnown RBP5.47□□□□□ -1.53
CHD1-209ENST00000512844 SNX9Q9Y5X1 595 aa5.47□□□□□ -1.53
CHD1-209ENST00000512844 SCINQ9Y6U3 715 aa5.47□□□□□ -1.53
CHD1-209ENST00000512844 IGLV5-37A0A075B6J1 123 aa5.46□□□□□ -1.54
CHD1-209ENST00000512844 IGLV5-52A0A0A0MRZ9 124 aa5.46□□□□□ -1.54
CHD1-209ENST00000512844 A0A1W2PPH5 198 aa5.46□□□□□ -1.54
CHD1-209ENST00000512844 PLSCR5A0PG75 271 aa5.46□□□□□ -1.54
CHD1-209ENST00000512844 C4orf47A7E2U8 309 aa5.46□□□□□ -1.54
CHD1-209ENST00000512844 BTBD18B2RXH4 712 aa5.46□□□□□ -1.54
CHD1-209ENST00000512844 WNT9BO14905 357 aa5.46□□□□□ -1.54
CHD1-209ENST00000512844 HSPA12AO43301 675 aa5.46□□□□□ -1.54
CHD1-209ENST00000512844 SEC14L5O43304 696 aa5.46□□□□□ -1.54
CHD1-209ENST00000512844 KLK8O60259 260 aa5.46□□□□□ -1.54
CHD1-209ENST00000512844 TIPRLO75663 272 aa5.46□□□□□ -1.54
CHD1-209ENST00000512844 KRT10P13645 584 aa5.46□□□□□ -1.54
CHD1-209ENST00000512844 CASP6P55212 293 aa5.46□□□□□ -1.54
CHD1-209ENST00000512844 SORDQ00796 357 aa5.46□□□□□ -1.54
CHD1-209ENST00000512844 GRIK3Q13003 919 aa5.46□□□□□ -1.54
CHD1-209ENST00000512844 R3HCC1LQ7Z5L2 792 aaKnown RBP5.46□□□□□ -1.54
CHD1-209ENST00000512844 IL17REQ8NFR9 667 aa5.46□□□□□ -1.54
CHD1-209ENST00000512844 ADGRG7Q96K78 797 aa5.46□□□□□ -1.54
CHD1-209ENST00000512844 DUX5Q96PT3 197 aa5.46□□□□□ -1.54
CHD1-209ENST00000512844 GPR108Q9NPR9 543 aa5.46□□□□□ -1.54
CHD1-209ENST00000512844 FBXO9Q9UK97 447 aaPredicted RBP5.46□□□□□ -1.54
CHD1-209ENST00000512844 AKR1B15C9JRZ8 316 aaPredicted RBP5.45□□□□□ -1.54
CHD1-209ENST00000512844 NPIPB11E5RHQ5 1161 aa5.45□□□□□ -1.54
CHD1-209ENST00000512844 PLA2G2AP14555 144 aa5.45□□□□□ -1.54
CHD1-209ENST00000512844 AGAP20933 346 aa5.45□□□□□ -1.54
CHD1-209ENST00000512844 RAD23BP54727 409 aa5.45□□□□□ -1.54
CHD1-209ENST00000512844 RRP1P56182 461 aaKnown RBP5.45□□□□□ -1.54
CHD1-209ENST00000512844 MYBPHQ13203 477 aa5.45□□□□□ -1.54
CHD1-209ENST00000512844 KIF19Q2TAC6 998 aa5.45□□□□□ -1.54
CHD1-209ENST00000512844 PRICKLE4Q2TBC4 344 aa5.45□□□□□ -1.54
CHD1-209ENST00000512844 MMEL1Q495T6 779 aa5.45□□□□□ -1.54
CHD1-209ENST00000512844 FAM122CQ6P4D5 195 aa5.45□□□□□ -1.54
CHD1-209ENST00000512844 CRELD2Q6UXH1 353 aaPredicted RBP5.45□□□□□ -1.54
CHD1-209ENST00000512844 KRBA2Q6ZNG9 492 aa5.45□□□□□ -1.54
CHD1-209ENST00000512844 NOXA1Q86UR1 476 aa5.45□□□□□ -1.54
CHD1-209ENST00000512844 ZBTB2Q8N680 514 aa5.45□□□□□ -1.54
CHD1-209ENST00000512844 PCYOX1LQ8NBM8 494 aa5.45□□□□□ -1.54
CHD1-209ENST00000512844 HUS1BQ8NHY5 278 aa5.45□□□□□ -1.54
CHD1-209ENST00000512844 NDST4Q9H3R1 872 aa5.45□□□□□ -1.54
CHD1-209ENST00000512844 C17orf75Q9HAS0 396 aa5.45□□□□□ -1.54
CHD1-209ENST00000512844 BCCIPQ9P287 314 aaKnown RBP eCLIP5.45□□□□□ -1.54
CHD1-209ENST00000512844 MALT1Q9UDY8 824 aa5.45□□□□□ -1.54
CHD1-209ENST00000512844 SLCO3A1Q9UIG8 710 aa5.45□□□□□ -1.54
CHD1-209ENST00000512844 HAO1Q9UJM8 370 aa5.45□□□□□ -1.54
CHD1-209ENST00000512844 TRIP12Q14669 1992 aaPredicted RBP5.45□□□□□ -1.54
CHD1-209ENST00000512844 EME2A4GXA9 379 aaPredicted RBP5.44□□□□□ -1.54
CHD1-209ENST00000512844 TMEM202A6NGA9 273 aa5.44□□□□□ -1.54
CHD1-209ENST00000512844 J3KR12 359 aa5.44□□□□□ -1.54
CHD1-209ENST00000512844 SNAP23O00161 211 aa5.44□□□□□ -1.54
CHD1-209ENST00000512844 TNFSF14O43557 240 aa5.44□□□□□ -1.54
CHD1-209ENST00000512844 SEC14L2O76054 403 aa5.44□□□□□ -1.54
CHD1-209ENST00000512844 SPARCP09486 303 aa5.44□□□□□ -1.54
CHD1-209ENST00000512844 HSPA1AP0DMV8 641 aaKnown RBP5.44□□□□□ -1.54
CHD1-209ENST00000512844 HSPA1BP0DMV9 641 aaKnown RBP5.44□□□□□ -1.54
CHD1-209ENST00000512844 IGHV4-30-4P0DP06 118 aa5.44□□□□□ -1.54
CHD1-209ENST00000512844 DDX5P17844 614 aaKnown RBP5.44□□□□□ -1.54
CHD1-209ENST00000512844 HNRNPH1P31943 449 aaKnown RBP5.44□□□□□ -1.54
CHD1-209ENST00000512844 CDAP32320 146 aa5.44□□□□□ -1.54
CHD1-209ENST00000512844 EFNA5P52803 228 aa5.44□□□□□ -1.54
CHD1-209ENST00000512844 POU5F1BQ06416 359 aa5.44□□□□□ -1.54
CHD1-209ENST00000512844 SNTA1Q13424 505 aa5.44□□□□□ -1.54
CHD1-209ENST00000512844 NAE1Q13564 534 aa5.44□□□□□ -1.54
CHD1-209ENST00000512844 DHX34Q14147 1143 aaKnown RBP5.44□□□□□ -1.54
CHD1-209ENST00000512844 CTF1Q16619 201 aa5.44□□□□□ -1.54
CHD1-209ENST00000512844 AMZ1Q400G9 498 aa5.44□□□□□ -1.54
CHD1-209ENST00000512844 ATP13A5Q4VNC0 1218 aa5.44□□□□□ -1.54
CHD1-209ENST00000512844 CDC73Q6P1J9 531 aa5.44□□□□□ -1.54
CHD1-209ENST00000512844 METTL2BQ6P1Q9 378 aaKnown RBP5.44□□□□□ -1.54
CHD1-209ENST00000512844 INO80CQ6PI98 192 aaPredicted RBP5.44□□□□□ -1.54
CHD1-209ENST00000512844 CERS3Q8IU89 383 aa5.44□□□□□ -1.54
CHD1-209ENST00000512844 CREB3L4Q8TEY5 395 aa5.44□□□□□ -1.54
CHD1-209ENST00000512844 GTF3C6Q969F1 213 aa5.44□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms