RNA–Protein interactions for RNA: ENST00000512229.6

PCDHA4-202, Transcript of protocadherin alpha 4, humanhuman

TSL 1 (best) BASIC

Gene PCDHA4, Length 4,163 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA4-202ENST00000512229 CCL5P13501 91 aa13.16□□□□□ -0.3
PCDHA4-202ENST00000512229 SOAT1P35610 550 aa13.16□□□□□ -0.3
PCDHA4-202ENST00000512229 APLP1P51693 650 aa13.16□□□□□ -0.3
PCDHA4-202ENST00000512229 ELF3P78545 371 aaPredicted RBP13.16□□□□□ -0.3
PCDHA4-202ENST00000512229 KCNJ11Q14654 390 aa13.16□□□□□ -0.3
PCDHA4-202ENST00000512229 RIPOR1Q6ZS17 1223 aa13.16□□□□□ -0.3
PCDHA4-202ENST00000512229 C11orf96Q7Z7L8 435 aa13.16□□□□□ -0.3
PCDHA4-202ENST00000512229 BANPQ8N9N5 519 aa13.16□□□□□ -0.3
PCDHA4-202ENST00000512229 RIN3Q8TB24 985 aa13.16□□□□□ -0.3
PCDHA4-202ENST00000512229 NXNL1Q96CM4 212 aa13.16□□□□□ -0.3
PCDHA4-202ENST00000512229 YIPF3Q9GZM5 350 aa13.16□□□□□ -0.3
PCDHA4-202ENST00000512229 ATP6AP2A0A1C7CYW4 349 aa13.15□□□□□ -0.3
PCDHA4-202ENST00000512229 TRAFD1O14545 582 aaPredicted RBP13.15□□□□□ -0.3
PCDHA4-202ENST00000512229 ATP6AP2O75787 350 aa13.15□□□□□ -0.3
PCDHA4-202ENST00000512229 IL1BP01584 269 aa13.15□□□□□ -0.3
PCDHA4-202ENST00000512229 ACADMP11310 421 aa13.15□□□□□ -0.3
PCDHA4-202ENST00000512229 PCNAP12004 261 aa13.15□□□□□ -0.3
PCDHA4-202ENST00000512229 POLD2P49005 469 aa13.15□□□□□ -0.3
PCDHA4-202ENST00000512229 ADGRF1Q5T601 910 aa13.15□□□□□ -0.3
PCDHA4-202ENST00000512229 GRAMD4Q6IC98 578 aa13.15□□□□□ -0.3
PCDHA4-202ENST00000512229 UNC93B1Q9H1C4 597 aa13.15□□□□□ -0.3
PCDHA4-202ENST00000512229 CCSER2Q9H7U1 834 aa13.15□□□□□ -0.3
PCDHA4-202ENST00000512229 FLRT1Q9NZU1 646 aa13.15□□□□□ -0.3
PCDHA4-202ENST00000512229 C9IYK1 514 aa13.15□□□□□ -0.3
PCDHA4-202ENST00000512229 BEST1O76090 585 aa13.15□□□□□ -0.3
PCDHA4-202ENST00000512229 ALOX15P16050 662 aaPredicted RBP13.15□□□□□ -0.3
PCDHA4-202ENST00000512229 GRK3P35626 688 aa13.15□□□□□ -0.3
PCDHA4-202ENST00000512229 LZICQ8WZA0 190 aa13.15□□□□□ -0.3
PCDHA4-202ENST00000512229 SEC14L1Q92503 715 aa13.15□□□□□ -0.3
PCDHA4-202ENST00000512229 SMG7Q92540 1137 aaKnown RBP13.15□□□□□ -0.3
PCDHA4-202ENST00000512229 ELMO1Q92556 727 aa13.15□□□□□ -0.3
PCDHA4-202ENST00000512229 AGAP2Q99490 1192 aa13.15□□□□□ -0.3
PCDHA4-202ENST00000512229 PAAF1Q9BRP4 392 aa13.15□□□□□ -0.3
PCDHA4-202ENST00000512229 KLQ9UEF7 1012 aa13.15□□□□□ -0.3
PCDHA4-202ENST00000512229 MYH9P35579 1960 aaKnown RBP13.15□□□□□ -0.3
PCDHA4-202ENST00000512229 ZBTB42B2RXF5 422 aa13.15□□□□□ -0.3
PCDHA4-202ENST00000512229 KPNA5O15131 536 aa13.15□□□□□ -0.3
PCDHA4-202ENST00000512229 GRM6O15303 877 aa13.15□□□□□ -0.3
PCDHA4-202ENST00000512229 PEX11AO75192 247 aa13.15□□□□□ -0.3
PCDHA4-202ENST00000512229 UGT2B4P06133 528 aa13.15□□□□□ -0.3
PCDHA4-202ENST00000512229 CLTBP09497 229 aa13.15□□□□□ -0.3
PCDHA4-202ENST00000512229 EPB42P16452 691 aa13.15□□□□□ -0.3
PCDHA4-202ENST00000512229 NAA20P61599 178 aa13.15□□□□□ -0.3
PCDHA4-202ENST00000512229 PITX1P78337 314 aaPredicted RBP13.15□□□□□ -0.3
PCDHA4-202ENST00000512229 MRPS35P82673 323 aaKnown RBP13.15□□□□□ -0.3
PCDHA4-202ENST00000512229 IRF8Q02556 426 aa13.15□□□□□ -0.3
PCDHA4-202ENST00000512229 GAD2Q05329 585 aa13.15□□□□□ -0.3
PCDHA4-202ENST00000512229 PGS1Q32NB8 556 aa13.15□□□□□ -0.3
PCDHA4-202ENST00000512229 SNX30Q5VWJ9 437 aa13.15□□□□□ -0.3
PCDHA4-202ENST00000512229 LYPLAL1Q5VWZ2 237 aa13.15□□□□□ -0.3
PCDHA4-202ENST00000512229 CERS6Q6ZMG9 384 aa13.15□□□□□ -0.3
PCDHA4-202ENST00000512229 CLYBLQ8N0X4 340 aa13.15□□□□□ -0.3
PCDHA4-202ENST00000512229 CYGBQ8WWM9 190 aa13.15□□□□□ -0.3
PCDHA4-202ENST00000512229 LINGO1Q96FE5 620 aa13.15□□□□□ -0.3
PCDHA4-202ENST00000512229 SPATS2LQ9NUQ6 558 aaKnown RBP13.15□□□□□ -0.3
PCDHA4-202ENST00000512229 TMEM216Q9P0N5 145 aa13.15□□□□□ -0.3
PCDHA4-202ENST00000512229 DNAJB4Q9UDY4 337 aa13.15□□□□□ -0.3
PCDHA4-202ENST00000512229 TBC1D30Q9Y2I9 924 aa13.15□□□□□ -0.3
PCDHA4-202ENST00000512229 YIPF1Q9Y548 306 aa13.15□□□□□ -0.3
PCDHA4-202ENST00000512229 TEX264Q9Y6I9 313 aa13.15□□□□□ -0.3
PCDHA4-202ENST00000512229 RGSL1A5PLK6 1076 aa13.14□□□□□ -0.31
PCDHA4-202ENST00000512229 ZNF487B1APH4 448 aa13.14□□□□□ -0.31
PCDHA4-202ENST00000512229 SLC7A4O43246 635 aa13.14□□□□□ -0.31
PCDHA4-202ENST00000512229 WDR4P57081 412 aaKnown RBP13.14□□□□□ -0.31
PCDHA4-202ENST00000512229 SLC25A3Q00325 362 aa13.14□□□□□ -0.31
PCDHA4-202ENST00000512229 DSG1Q02413 1049 aa13.14□□□□□ -0.31
PCDHA4-202ENST00000512229 SLC10A7Q0GE19 358 aa13.14□□□□□ -0.31
PCDHA4-202ENST00000512229 MSS51Q4VC12 460 aa13.14□□□□□ -0.31
PCDHA4-202ENST00000512229 MARCH8Q5T0T0 291 aa13.14□□□□□ -0.31
PCDHA4-202ENST00000512229 CNKSR3Q6P9H4 555 aa13.14□□□□□ -0.31
PCDHA4-202ENST00000512229 DENND6AQ8IWF6 608 aa13.14□□□□□ -0.31
PCDHA4-202ENST00000512229 MPP5Q8N3R9 675 aa13.14□□□□□ -0.31
PCDHA4-202ENST00000512229 ZNF461Q8TAF7 563 aa13.14□□□□□ -0.31
PCDHA4-202ENST00000512229 BRSK1Q8TDC3 778 aa13.14□□□□□ -0.31
PCDHA4-202ENST00000512229 CSGALNACT1Q8TDX6 532 aa13.14□□□□□ -0.31
PCDHA4-202ENST00000512229 PIK3R5Q8WYR1 880 aa13.14□□□□□ -0.31
PCDHA4-202ENST00000512229 AZIN2Q96A70 460 aa13.14□□□□□ -0.31
PCDHA4-202ENST00000512229 ASB3Q9Y575 518 aa13.14□□□□□ -0.31
PCDHA4-202ENST00000512229 HS3ST4Q9Y661 456 aa13.14□□□□□ -0.31
PCDHA4-202ENST00000512229 MYH7BA7E2Y1 1941 aa13.14□□□□□ -0.31
PCDHA4-202ENST00000512229 SYNDIG1LA6NDD5 238 aa13.14□□□□□ -0.31
PCDHA4-202ENST00000512229 RGS14O43566 566 aa13.14□□□□□ -0.31
PCDHA4-202ENST00000512229 GPR15P49685 360 aa13.14□□□□□ -0.31
PCDHA4-202ENST00000512229 CYP51A1Q16850 503 aa13.14□□□□□ -0.31
PCDHA4-202ENST00000512229 ARMC6Q6NXE6 501 aa13.14□□□□□ -0.31
PCDHA4-202ENST00000512229 DET1Q7L5Y6 550 aa13.14□□□□□ -0.31
PCDHA4-202ENST00000512229 CLNKQ7Z7G1 428 aa13.14□□□□□ -0.31
PCDHA4-202ENST00000512229 ALYREFQ86V81 257 aaKnown RBP13.14□□□□□ -0.31
PCDHA4-202ENST00000512229 ZNF555Q8NEP9 628 aa13.14□□□□□ -0.31
PCDHA4-202ENST00000512229 PXYLP1Q8TE99 480 aa13.14□□□□□ -0.31
PCDHA4-202ENST00000512229 ZNF296Q8WUU4 475 aaPredicted RBP13.14□□□□□ -0.31
PCDHA4-202ENST00000512229 KBTBD7Q8WVZ9 684 aa13.14□□□□□ -0.31
PCDHA4-202ENST00000512229 DNAJC1Q96KC8 554 aaKnown RBP13.14□□□□□ -0.31
PCDHA4-202ENST00000512229 C7orf26Q96N11 449 aa13.14□□□□□ -0.31
PCDHA4-202ENST00000512229 MTMR11A4FU01 709 aa13.14□□□□□ -0.31
PCDHA4-202ENST00000512229 KCNQ1P51787 676 aa13.14□□□□□ -0.31
PCDHA4-202ENST00000512229 HK2P52789 917 aa13.14□□□□□ -0.31
PCDHA4-202ENST00000512229 TAS2R39P59534 338 aa13.14□□□□□ -0.31
PCDHA4-202ENST00000512229 PLOD1Q02809 727 aaPredicted RBP13.14□□□□□ -0.31
PCDHA4-202ENST00000512229 SLC34A1Q06495 639 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms