RNA–Protein interactions for RNA: ENST00000511739.1

USP38-203, Transcript of ubiquitin specific peptidase 38, humanhuman

TSL 2

Gene USP38, Length 6,376 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP38-203ENST00000511739 MRASO14807 208 aa5.8□□□□□ -1.48
USP38-203ENST00000511739 LIN7AO14910 233 aaPredicted RBP5.8□□□□□ -1.48
USP38-203ENST00000511739 SLC28A2O43868 658 aa5.8□□□□□ -1.48
USP38-203ENST00000511739 SMIM10L2AP0DMW4 78 aa5.8□□□□□ -1.48
USP38-203ENST00000511739 SMIM10L2BP0DMW5 78 aa5.8□□□□□ -1.48
USP38-203ENST00000511739 ITGA2P17301 1181 aa5.8□□□□□ -1.48
USP38-203ENST00000511739 MBTD1Q05BQ5 628 aa5.8□□□□□ -1.48
USP38-203ENST00000511739 N4BP2L1Q5TBK1 243 aaPredicted RBP5.8□□□□□ -1.48
USP38-203ENST00000511739 SV2AQ7L0J3 742 aa5.8□□□□□ -1.48
USP38-203ENST00000511739 PRSS58Q8IYP2 241 aa5.8□□□□□ -1.48
USP38-203ENST00000511739 UBR7Q8N806 425 aa5.8□□□□□ -1.48
USP38-203ENST00000511739 HEXDCQ8WVB3 486 aa5.8□□□□□ -1.48
USP38-203ENST00000511739 QKIQ96PU8 341 aaKnown RBP eCLIP5.8□□□□□ -1.48
USP38-203ENST00000511739 GAL3ST4Q96RP7 486 aa5.8□□□□□ -1.48
USP38-203ENST00000511739 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP5.8□□□□□ -1.48
USP38-203ENST00000511739 CLN6Q9NWW5 311 aa5.8□□□□□ -1.48
USP38-203ENST00000511739 CFAP97Q9P2B7 532 aa5.8□□□□□ -1.48
USP38-203ENST00000511739 IKZF2Q9UKS7 526 aa5.8□□□□□ -1.48
USP38-203ENST00000511739 VPS4AQ9UN37 437 aa5.8□□□□□ -1.48
USP38-203ENST00000511739 PHF24Q9UPV7 400 aa5.8□□□□□ -1.48
USP38-203ENST00000511739 PCDHB3Q9Y5E6 796 aa5.8□□□□□ -1.48
USP38-203ENST00000511739 PTPRJQ12913 1337 aa5.8□□□□□ -1.48
USP38-203ENST00000511739 PTGES3LE9PB15 166 aa5.8□□□□□ -1.48
USP38-203ENST00000511739 CTPS1P17812 591 aa5.8□□□□□ -1.48
USP38-203ENST00000511739 ALOX12P18054 663 aa5.8□□□□□ -1.48
USP38-203ENST00000511739 AGXTP21549 392 aa5.8□□□□□ -1.48
USP38-203ENST00000511739 CCKBRP32239 447 aa5.8□□□□□ -1.48
USP38-203ENST00000511739 CDH5P33151 784 aaPredicted RBP5.8□□□□□ -1.48
USP38-203ENST00000511739 BLKP51451 505 aa5.8□□□□□ -1.48
USP38-203ENST00000511739 UGT2B15P54855 530 aa5.8□□□□□ -1.48
USP38-203ENST00000511739 TAS2R41P59536 307 aa5.8□□□□□ -1.48
USP38-203ENST00000511739 CNTN2Q02246 1040 aa5.8□□□□□ -1.48
USP38-203ENST00000511739 ELP6Q0PNE2 266 aa5.8□□□□□ -1.48
USP38-203ENST00000511739 ZNF155Q12901 538 aaPredicted RBP5.8□□□□□ -1.48
USP38-203ENST00000511739 TRAF3Q13114 568 aa5.8□□□□□ -1.48
USP38-203ENST00000511739 MAPK7Q13164 816 aa5.8□□□□□ -1.48
USP38-203ENST00000511739 CRY2Q49AN0 593 aa5.8□□□□□ -1.48
USP38-203ENST00000511739 CES3Q6UWW8 571 aa5.8□□□□□ -1.48
USP38-203ENST00000511739 ZDHHC13Q8IUH4 622 aa5.8□□□□□ -1.48
USP38-203ENST00000511739 ABRAQ8N0Z2 381 aa5.8□□□□□ -1.48
USP38-203ENST00000511739 TEX47Q8TBZ9 253 aa5.8□□□□□ -1.48
USP38-203ENST00000511739 ADAMTS15Q8TE58 950 aa5.8□□□□□ -1.48
USP38-203ENST00000511739 RNF31Q96EP0 1072 aa5.8□□□□□ -1.48
USP38-203ENST00000511739 Q96MT0 163 aa5.8□□□□□ -1.48
USP38-203ENST00000511739 OR12D3Q9UGF7 316 aa5.8□□□□□ -1.48
USP38-203ENST00000511739 LRCH1Q9Y2L9 728 aa5.8□□□□□ -1.48
USP38-203ENST00000511739 DISP2A7MBM2 1401 aa5.8□□□□□ -1.48
USP38-203ENST00000511739 LAMB4A4D0S4 1761 aa5.8□□□□□ -1.48
USP38-203ENST00000511739 ARFGEF2Q9Y6D5 1785 aa5.8□□□□□ -1.48
USP38-203ENST00000511739 CPED1A4D0V7 1026 aa5.8□□□□□ -1.48
USP38-203ENST00000511739 WNT10BO00744 389 aa5.8□□□□□ -1.48
USP38-203ENST00000511739 BUD23O43709 281 aaKnown RBP5.8□□□□□ -1.48
USP38-203ENST00000511739 CHRNGP07510 517 aa5.8□□□□□ -1.48
USP38-203ENST00000511739 VIL1P09327 827 aaKnown RBP5.8□□□□□ -1.48
USP38-203ENST00000511739 GZMAP12544 262 aa5.8□□□□□ -1.48
USP38-203ENST00000511739 IL12BP29460 328 aa5.8□□□□□ -1.48
USP38-203ENST00000511739 MNDAP41218 407 aa5.8□□□□□ -1.48
USP38-203ENST00000511739 PTPN9P43378 593 aa5.8□□□□□ -1.48
USP38-203ENST00000511739 FLT3LGP49771 235 aa5.8□□□□□ -1.48
USP38-203ENST00000511739 KLK7P49862 253 aa5.8□□□□□ -1.48
USP38-203ENST00000511739 PER3P56645 1201 aa5.8□□□□□ -1.48
USP38-203ENST00000511739 C1QBPQ07021 282 aaKnown RBP5.8□□□□□ -1.48
USP38-203ENST00000511739 TBX2Q13207 712 aaPredicted RBP5.8□□□□□ -1.48
USP38-203ENST00000511739 VGLL4Q14135 290 aa5.8□□□□□ -1.48
USP38-203ENST00000511739 PFKFB4Q16877 469 aa5.8□□□□□ -1.48
USP38-203ENST00000511739 NEPROQ6NW34 567 aa5.8□□□□□ -1.48
USP38-203ENST00000511739 DCLRE1AQ6PJP8 1040 aa5.8□□□□□ -1.48
USP38-203ENST00000511739 ZPBP2Q6X784 338 aa5.8□□□□□ -1.48
USP38-203ENST00000511739 AMIGO1Q86WK6 493 aa5.8□□□□□ -1.48
USP38-203ENST00000511739 RASGRP3Q8IV61 690 aa5.8□□□□□ -1.48
USP38-203ENST00000511739 RAVER1Q8IY67 606 aaKnown RBP5.8□□□□□ -1.48
USP38-203ENST00000511739 TSTD1Q8NFU3 115 aa5.8□□□□□ -1.48
USP38-203ENST00000511739 PHF10Q8WUB8 498 aaKnown RBP5.8□□□□□ -1.48
USP38-203ENST00000511739 MYLPFQ96A32 169 aa5.8□□□□□ -1.48
USP38-203ENST00000511739 MCMBPQ9BTE3 642 aa5.8□□□□□ -1.48
USP38-203ENST00000511739 SEMA3GQ9NS98 782 aa5.8□□□□□ -1.48
USP38-203ENST00000511739 TAGLN3Q9UI15 199 aa5.8□□□□□ -1.48
USP38-203ENST00000511739 RPS6KA6Q9UK32 745 aa5.8□□□□□ -1.48
USP38-203ENST00000511739 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP5.8□□□□□ -1.48
USP38-203ENST00000511739 FFAR3O14843 346 aa5.8□□□□□ -1.48
USP38-203ENST00000511739 GPR42O15529 346 aa5.8□□□□□ -1.48
USP38-203ENST00000511739 SIN3BO75182 1162 aa5.8□□□□□ -1.48
USP38-203ENST00000511739 TRUB2O95900 331 aaKnown RBP5.8□□□□□ -1.48
USP38-203ENST00000511739 PCCBP05166 539 aa5.8□□□□□ -1.48
USP38-203ENST00000511739 PTPRAP18433 802 aa5.8□□□□□ -1.48
USP38-203ENST00000511739 SLC1A6P48664 564 aa5.8□□□□□ -1.48
USP38-203ENST00000511739 MSLNQ13421 630 aaPredicted RBP5.8□□□□□ -1.48
USP38-203ENST00000511739 TERF2Q15554 542 aa5.8□□□□□ -1.48
USP38-203ENST00000511739 AMZ1Q400G9 498 aa5.8□□□□□ -1.48
USP38-203ENST00000511739 PGBD2Q6P3X8 592 aa5.8□□□□□ -1.48
USP38-203ENST00000511739 SLC30A10Q6XR72 485 aa5.8□□□□□ -1.48
USP38-203ENST00000511739 NIPA1Q7RTP0 329 aa5.8□□□□□ -1.48
USP38-203ENST00000511739 SLC47A2Q86VL8 602 aa5.8□□□□□ -1.48
USP38-203ENST00000511739 ADHFE1Q8IWW8 467 aa5.8□□□□□ -1.48
USP38-203ENST00000511739 OFCC1Q8IZS5 231 aa5.8□□□□□ -1.48
USP38-203ENST00000511739 ZCCHC7Q8N3Z6 543 aaKnown RBP5.8□□□□□ -1.48
USP38-203ENST00000511739 SETD6Q8TBK2 473 aa5.8□□□□□ -1.48
USP38-203ENST00000511739 WNT8BQ93098 351 aa5.8□□□□□ -1.48
USP38-203ENST00000511739 TIFAQ96CG3 184 aa5.8□□□□□ -1.48
USP38-203ENST00000511739 AP2M1Q96CW1 435 aa5.8□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms