RNA–Protein interactions for RNA: ENST00000511198.5

GYPB-212, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPB, Length 444 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-212ENST00000511198 U2AF2P26368 475 aaKnown RBP eCLIP5.8□□□□□ -1.48
GYPB-212ENST00000511198 LIPAP38571 399 aa5.8□□□□□ -1.48
GYPB-212ENST00000511198 LOXL3P58215 753 aa5.8□□□□□ -1.48
GYPB-212ENST00000511198 LILRA4P59901 499 aa5.8□□□□□ -1.48
GYPB-212ENST00000511198 IQCB1Q15051 598 aa5.8□□□□□ -1.48
GYPB-212ENST00000511198 CDC37Q16543 378 aaPredicted RBP5.8□□□□□ -1.48
GYPB-212ENST00000511198 PLEKHG6Q3KR16 790 aa5.8□□□□□ -1.48
GYPB-212ENST00000511198 IFIT1BQ5T764 474 aaKnown RBP5.8□□□□□ -1.48
GYPB-212ENST00000511198 DHX40Q8IX18 779 aaKnown RBP5.8□□□□□ -1.48
GYPB-212ENST00000511198 LNX1Q8TBB1 728 aaPredicted RBP5.8□□□□□ -1.48
GYPB-212ENST00000511198 ANP32BQ92688 251 aaKnown RBP5.8□□□□□ -1.48
GYPB-212ENST00000511198 MOCOSQ96EN8 888 aa5.8□□□□□ -1.48
GYPB-212ENST00000511198 PPP1R9BQ96SB3 815 aa5.8□□□□□ -1.48
GYPB-212ENST00000511198 TMEM47Q9BQJ4 181 aa5.8□□□□□ -1.48
GYPB-212ENST00000511198 PANK2Q9BZ23 570 aa5.8□□□□□ -1.48
GYPB-212ENST00000511198 PDCL3Q9H2J4 239 aa5.8□□□□□ -1.48
GYPB-212ENST00000511198 ZNF287Q9HBT7 754 aa5.8□□□□□ -1.48
GYPB-212ENST00000511198 SARS2Q9NP81 518 aaKnown RBP5.8□□□□□ -1.48
GYPB-212ENST00000511198 TM7SF3Q9NS93 570 aa5.8□□□□□ -1.48
GYPB-212ENST00000511198 SERTAD3Q9UJW9 196 aa5.8□□□□□ -1.48
GYPB-212ENST00000511198 PNMA8BQ9ULN7 279 aaPredicted RBP5.8□□□□□ -1.48
GYPB-212ENST00000511198 PADI4Q9UM07 663 aa5.8□□□□□ -1.48
GYPB-212ENST00000511198 DDX19BQ9UMR2 479 aa5.8□□□□□ -1.48
GYPB-212ENST00000511198 MED16Q9Y2X0 877 aa5.8□□□□□ -1.48
GYPB-212ENST00000511198 MRPL11Q9Y3B7 192 aaKnown RBP5.8□□□□□ -1.48
GYPB-212ENST00000511198 MYO16Q9Y6X6 1858 aa5.79□□□□□ -1.48
GYPB-212ENST00000511198 DNAJC9-AS1A6NH13 148 aa5.79□□□□□ -1.48
GYPB-212ENST00000511198 TARM1B6A8C7 271 aa5.79□□□□□ -1.48
GYPB-212ENST00000511198 ZNF213O14771 459 aa5.79□□□□□ -1.48
GYPB-212ENST00000511198 AKAP10O43572 662 aa5.79□□□□□ -1.48
GYPB-212ENST00000511198 AP1G1O43747 822 aa5.79□□□□□ -1.48
GYPB-212ENST00000511198 ERBB2P04626 1255 aa5.79□□□□□ -1.48
GYPB-212ENST00000511198 GRPP07492 148 aa5.79□□□□□ -1.48
GYPB-212ENST00000511198 CELA2AP08217 269 aa5.79□□□□□ -1.48
GYPB-212ENST00000511198 FAM163BP0C2L3 166 aa5.79□□□□□ -1.48
GYPB-212ENST00000511198 PPIFP30405 207 aaKnown RBP5.79□□□□□ -1.48
GYPB-212ENST00000511198 NLRP11P59045 1033 aaKnown RBP5.79□□□□□ -1.48
GYPB-212ENST00000511198 BNC1Q01954 994 aa5.79□□□□□ -1.48
GYPB-212ENST00000511198 PIN1Q13526 163 aaPredicted RBP5.79□□□□□ -1.48
GYPB-212ENST00000511198 TEDDM1Q5T9Z0 273 aa5.79□□□□□ -1.48
GYPB-212ENST00000511198 FUT10Q6P4F1 479 aa5.79□□□□□ -1.48
GYPB-212ENST00000511198 B3GNT9Q6UX72 402 aa5.79□□□□□ -1.48
GYPB-212ENST00000511198 CLEC17AQ6ZS10 378 aa5.79□□□□□ -1.48
GYPB-212ENST00000511198 MTERF4Q7Z6M4 381 aaKnown RBP5.79□□□□□ -1.48
GYPB-212ENST00000511198 FTSJ3Q8IY81 847 aaKnown RBP5.79□□□□□ -1.48
GYPB-212ENST00000511198 SEMA6DQ8NFY4 1073 aa5.79□□□□□ -1.48
GYPB-212ENST00000511198 KCNE4Q8WWG9 221 aa5.79□□□□□ -1.48
GYPB-212ENST00000511198 JPH3Q8WXH2 748 aaPredicted RBP5.79□□□□□ -1.48
GYPB-212ENST00000511198 DDB2Q92466 427 aa5.79□□□□□ -1.48
GYPB-212ENST00000511198 REPS1Q96D71 796 aa5.79□□□□□ -1.48
GYPB-212ENST00000511198 MTFMTQ96DP5 389 aaKnown RBP5.79□□□□□ -1.48
GYPB-212ENST00000511198 PTDSS2Q9BVG9 487 aa5.79□□□□□ -1.48
GYPB-212ENST00000511198 DPH1Q9BZG8 443 aa5.79□□□□□ -1.48
GYPB-212ENST00000511198 CHMP4BQ9H444 224 aaKnown RBP5.79□□□□□ -1.48
GYPB-212ENST00000511198 DACT1Q9NYF0 836 aa5.79□□□□□ -1.48
GYPB-212ENST00000511198 GABBR1Q9UBS5 961 aa5.79□□□□□ -1.48
GYPB-212ENST00000511198 PLXND1Q9Y4D7 1925 aa5.78□□□□□ -1.48
GYPB-212ENST00000511198 hCG_2014768A0A024R1R8 64 aa5.78□□□□□ -1.48
GYPB-212ENST00000511198 LINC01548A6NM66 108 aa5.78□□□□□ -1.48
GYPB-212ENST00000511198 COL6A5A8TX70 2615 aa5.78□□□□□ -1.48
GYPB-212ENST00000511198 SLC16A3O15427 465 aaKnown RBP5.78□□□□□ -1.48
GYPB-212ENST00000511198 TLR5O60602 858 aa5.78□□□□□ -1.48
GYPB-212ENST00000511198 IL6RP08887 468 aaPredicted RBP5.78□□□□□ -1.48
GYPB-212ENST00000511198 ZNF883P0CG24 379 aa5.78□□□□□ -1.48
GYPB-212ENST00000511198 SNHG28P0DPA3 235 aa5.78□□□□□ -1.48
GYPB-212ENST00000511198 HNF1BP35680 557 aa5.78□□□□□ -1.48
GYPB-212ENST00000511198 KCNJ5P48544 419 aa5.78□□□□□ -1.48
GYPB-212ENST00000511198 RAB27AP51159 221 aa5.78□□□□□ -1.48
GYPB-212ENST00000511198 ANAPC15P60006 121 aa5.78□□□□□ -1.48
GYPB-212ENST00000511198 RAB1AP62820 205 aa5.78□□□□□ -1.48
GYPB-212ENST00000511198 ZNF33AQ06730 810 aa5.78□□□□□ -1.48
GYPB-212ENST00000511198 QRICH1Q2TAL8 776 aa5.78□□□□□ -1.48
GYPB-212ENST00000511198 ITPRIPL2Q3MIP1 535 aa5.78□□□□□ -1.48
GYPB-212ENST00000511198 ARL13BQ3SXY8 428 aa5.78□□□□□ -1.48
GYPB-212ENST00000511198 ARHGAP29Q52LW3 1261 aa5.78□□□□□ -1.48
GYPB-212ENST00000511198 HES3Q5TGS1 186 aa5.78□□□□□ -1.48
GYPB-212ENST00000511198 ANKRD16Q6P6B7 361 aa5.78□□□□□ -1.48
GYPB-212ENST00000511198 LAYNQ6UX15 382 aa5.78□□□□□ -1.48
GYPB-212ENST00000511198 PLPPR4Q7Z2D5 763 aa5.78□□□□□ -1.48
GYPB-212ENST00000511198 RABEPKQ7Z6M1 372 aa5.78□□□□□ -1.48
GYPB-212ENST00000511198 ZSCAN30Q86W11 494 aa5.78□□□□□ -1.48
GYPB-212ENST00000511198 TTC30AQ86WT1 665 aa5.78□□□□□ -1.48
GYPB-212ENST00000511198 ADGRF4Q8IZF3 695 aa5.78□□□□□ -1.48
GYPB-212ENST00000511198 URGCPQ8TCY9 931 aa5.78□□□□□ -1.48
GYPB-212ENST00000511198 SSC4DQ8WTU2 575 aa5.78□□□□□ -1.48
GYPB-212ENST00000511198 ZNF578Q96N58 590 aaPredicted RBP5.78□□□□□ -1.48
GYPB-212ENST00000511198 AIFM3Q96NN9 605 aa5.78□□□□□ -1.48
GYPB-212ENST00000511198 GAREM1Q9H706 876 aa5.78□□□□□ -1.48
GYPB-212ENST00000511198 MIOSQ9NXC5 875 aa5.78□□□□□ -1.48
GYPB-212ENST00000511198 XPR1Q9UBH6 696 aa5.78□□□□□ -1.48
GYPB-212ENST00000511198 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP5.78□□□□□ -1.486e-10■■■■■ 33.8
GYPB-212ENST00000511198 SDK2Q58EX2 2172 aa5.77□□□□□ -1.49
GYPB-212ENST00000511198 PHLPP2Q6ZVD8 1323 aa5.77□□□□□ -1.49
GYPB-212ENST00000511198 E2F8A0AVK6 867 aa5.77□□□□□ -1.49
GYPB-212ENST00000511198 H0YIZ8 118 aa5.77□□□□□ -1.49
GYPB-212ENST00000511198 H3BML4 177 aa5.77□□□□□ -1.49
GYPB-212ENST00000511198 ZNF197O14709 1029 aa5.77□□□□□ -1.49
GYPB-212ENST00000511198 FLRT2O43155 660 aa5.77□□□□□ -1.49
GYPB-212ENST00000511198 STAM2O75886 525 aa5.77□□□□□ -1.49
GYPB-212ENST00000511198 C22orf31O95567 290 aa5.77□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms