RNA–Protein interactions for RNA: ENST00000510171.3

DDX41-211, Transcript of DEAD-box helicase 41, humanhuman

TSL 3

Gene DDX41, Length 569 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-211ENST00000510171 PDXPQ96GD0 296 aa10.48□□□□□ -0.73
DDX41-211ENST00000510171 EXOC2Q96KP1 924 aa10.48□□□□□ -0.73
DDX41-211ENST00000510171 B3GNT4Q9C0J1 378 aa10.48□□□□□ -0.73
DDX41-211ENST00000510171 CATSPERBQ9H7T0 1116 aa10.48□□□□□ -0.73
DDX41-211ENST00000510171 SAMSN1Q9NSI8 373 aaKnown RBP10.48□□□□□ -0.73
DDX41-211ENST00000510171 FOXJ2Q9P0K8 574 aa10.48□□□□□ -0.73
DDX41-211ENST00000510171 LHX3Q9UBR4 397 aa10.48□□□□□ -0.73
DDX41-211ENST00000510171 UBA2Q9UBT2 640 aaPredicted RBP10.48□□□□□ -0.73
DDX41-211ENST00000510171 NOCTQ9UK39 431 aaKnown RBP10.48□□□□□ -0.73
DDX41-211ENST00000510171 ATP8A1Q9Y2Q0 1164 aa10.48□□□□□ -0.73
DDX41-211ENST00000510171 NYNRINQ9P2P1 1898 aaKnown RBP10.48□□□□□ -0.73
DDX41-211ENST00000510171 TRPM6Q9BX84 2022 aa10.47□□□□□ -0.73
DDX41-211ENST00000510171 TDRD6O60522 2096 aaKnown RBP10.47□□□□□ -0.73
DDX41-211ENST00000510171 TSPAN11A1L157 253 aa10.47□□□□□ -0.73
DDX41-211ENST00000510171 CFAP69A5D8W1 941 aa10.47□□□□□ -0.73
DDX41-211ENST00000510171 TMEM202A6NGA9 273 aa10.47□□□□□ -0.73
DDX41-211ENST00000510171 WASH4PA8MWX3 477 aa10.47□□□□□ -0.73
DDX41-211ENST00000510171 GOLGA6L22H0YM25 854 aa10.47□□□□□ -0.73
DDX41-211ENST00000510171 TNFRSF10CO14798 259 aa10.47□□□□□ -0.73
DDX41-211ENST00000510171 NUDT21O43809 227 aaKnown RBP10.47□□□□□ -0.73
DDX41-211ENST00000510171 CREB3O43889 395 aa10.47□□□□□ -0.73
DDX41-211ENST00000510171 BUB1BO60566 1050 aaPredicted RBP10.47□□□□□ -0.73
DDX41-211ENST00000510171 PPFIA2O75334 1257 aa10.47□□□□□ -0.73
DDX41-211ENST00000510171 GFPT2O94808 682 aa10.47□□□□□ -0.73
DDX41-211ENST00000510171 HOXC4P09017 264 aaPredicted RBP10.47□□□□□ -0.73
DDX41-211ENST00000510171 WT1P19544 449 aaPredicted RBP10.47□□□□□ -0.73
DDX41-211ENST00000510171 GPD1P21695 349 aa10.47□□□□□ -0.73
DDX41-211ENST00000510171 KELP23276 732 aa10.47□□□□□ -0.73
DDX41-211ENST00000510171 RFC1P35251 1148 aaPredicted RBP10.47□□□□□ -0.73
DDX41-211ENST00000510171 KIAA1024LP59773 190 aa10.47□□□□□ -0.73
DDX41-211ENST00000510171 CYP4F2P78329 520 aa10.47□□□□□ -0.73
DDX41-211ENST00000510171 HLTFQ14527 1009 aaKnown RBP eCLIP10.47□□□□□ -0.73
DDX41-211ENST00000510171 COLEC12Q5KU26 742 aa10.47□□□□□ -0.73
DDX41-211ENST00000510171 KCTD16Q68DU8 428 aa10.47□□□□□ -0.73
DDX41-211ENST00000510171 SPECC1LQ69YQ0 1117 aa10.47□□□□□ -0.73
DDX41-211ENST00000510171 SCYL2Q6P3W7 929 aa10.47□□□□□ -0.73
DDX41-211ENST00000510171 TRIM72Q6ZMU5 477 aa10.47□□□□□ -0.73
DDX41-211ENST00000510171 RBM43Q6ZSC3 357 aaKnown RBP10.47□□□□□ -0.73
DDX41-211ENST00000510171 PIM3Q86V86 326 aa10.47□□□□□ -0.73
DDX41-211ENST00000510171 CAMK1DQ8IU85 385 aa10.47□□□□□ -0.73
DDX41-211ENST00000510171 SLITRK4Q8IW52 837 aa10.47□□□□□ -0.73
DDX41-211ENST00000510171 UMODL1-AS1Q8N2C9 162 aa10.47□□□□□ -0.73
DDX41-211ENST00000510171 PLA2G15Q8NCC3 412 aa10.47□□□□□ -0.73
DDX41-211ENST00000510171 FUBP1Q96AE4 644 aaKnown RBP10.47□□□□□ -0.73
DDX41-211ENST00000510171 TUBGCP5Q96RT8 1024 aa10.47□□□□□ -0.73
DDX41-211ENST00000510171 C11orf70Q9BRQ4 267 aa10.47□□□□□ -0.73
DDX41-211ENST00000510171 SELENOOQ9BVL4 669 aa10.47□□□□□ -0.73
DDX41-211ENST00000510171 TMEM168Q9H0V1 697 aa10.47□□□□□ -0.73
DDX41-211ENST00000510171 SLC25A18Q9H1K4 315 aa10.47□□□□□ -0.73
DDX41-211ENST00000510171 SEMA6CQ9H3T2 930 aa10.47□□□□□ -0.73
DDX41-211ENST00000510171 FGF22Q9HCT0 170 aa10.47□□□□□ -0.73
DDX41-211ENST00000510171 MRPL40Q9NQ50 206 aaKnown RBP10.47□□□□□ -0.73
DDX41-211ENST00000510171 GEMIN8Q9NWZ8 242 aaKnown RBP10.47□□□□□ -0.73
DDX41-211ENST00000510171 DONSONQ9NYP3 566 aa10.47□□□□□ -0.73
DDX41-211ENST00000510171 ATMQ13315 3056 aa10.47□□□□□ -0.73
DDX41-211ENST00000510171 B4DGG1 531 aa10.46□□□□□ -0.73
DDX41-211ENST00000510171 J3KR12 359 aa10.46□□□□□ -0.73
DDX41-211ENST00000510171 PDE2AO00408 941 aaPredicted RBP10.46□□□□□ -0.73
DDX41-211ENST00000510171 ZW10O43264 779 aa10.46□□□□□ -0.73
DDX41-211ENST00000510171 B4GAT1O43505 415 aa10.46□□□□□ -0.73
DDX41-211ENST00000510171 RECQL5O94762 991 aaPredicted RBP10.46□□□□□ -0.73
DDX41-211ENST00000510171 PRKCGP05129 697 aa10.46□□□□□ -0.73
DDX41-211ENST00000510171 CHRNB2P17787 502 aa10.46□□□□□ -0.73
DDX41-211ENST00000510171 TRIM23P36406 574 aa10.46□□□□□ -0.73
DDX41-211ENST00000510171 MMP12P39900 470 aa10.46□□□□□ -0.73
DDX41-211ENST00000510171 B4GALNT1Q00973 533 aa10.46□□□□□ -0.73
DDX41-211ENST00000510171 FMO1Q01740 532 aa10.46□□□□□ -0.73
DDX41-211ENST00000510171 CLCA4Q14CN2 919 aa10.46□□□□□ -0.73
DDX41-211ENST00000510171 TSR1Q2NL82 804 aaKnown RBP10.46□□□□□ -0.73
DDX41-211ENST00000510171 AMZ1Q400G9 498 aa10.46□□□□□ -0.73
DDX41-211ENST00000510171 MAP9Q49MG5 647 aa10.46□□□□□ -0.73
DDX41-211ENST00000510171 FKBP15Q5T1M5 1219 aa10.46□□□□□ -0.73
DDX41-211ENST00000510171 CDKAL1Q5VV42 579 aa10.46□□□□□ -0.73
DDX41-211ENST00000510171 WDR59Q6PJI9 974 aa10.46□□□□□ -0.73
DDX41-211ENST00000510171 TMPRSS9Q7Z410 1059 aa10.46□□□□□ -0.73
DDX41-211ENST00000510171 ZSWIM9Q86XI8 627 aa10.46□□□□□ -0.73
DDX41-211ENST00000510171 SFTPA2Q8IWL1 248 aa10.46□□□□□ -0.73
DDX41-211ENST00000510171 PAF1Q8N7H5 531 aa10.46□□□□□ -0.73
DDX41-211ENST00000510171 ANKRD20A12PQ8NF67 263 aa10.46□□□□□ -0.73
DDX41-211ENST00000510171 CCL4L1Q8NHW4 92 aa10.46□□□□□ -0.73
DDX41-211ENST00000510171 KIAA1524Q8TCG1 905 aa10.46□□□□□ -0.73
DDX41-211ENST00000510171 ATP13A3Q9H7F0 1226 aa10.46□□□□□ -0.73
DDX41-211ENST00000510171 CYP4F12Q9HCS2 524 aa10.46□□□□□ -0.73
DDX41-211ENST00000510171 TAB2Q9NYJ8 693 aa10.46□□□□□ -0.73
DDX41-211ENST00000510171 ADAM22Q9P0K1 906 aa10.46□□□□□ -0.73
DDX41-211ENST00000510171 SEPT3Q9UH03 358 aa10.46□□□□□ -0.73
DDX41-211ENST00000510171 MOSPD1Q9UJG1 213 aa10.46□□□□□ -0.73
DDX41-211ENST00000510171 TENM4Q6N022 2769 aa10.46□□□□□ -0.74
DDX41-211ENST00000510171 SIGLEC16A6NMB1 481 aa10.45□□□□□ -0.74
DDX41-211ENST00000510171 RHPN2P1A8MT19 583 aa10.45□□□□□ -0.74
DDX41-211ENST00000510171 IQCJ-SCHIP1C9J366 451 aaPredicted RBP10.45□□□□□ -0.74
DDX41-211ENST00000510171 STMND1H3BQB6 276 aa10.45□□□□□ -0.74
DDX41-211ENST00000510171 FGF10O15520 208 aaPredicted RBP10.45□□□□□ -0.74
DDX41-211ENST00000510171 PRAMEF11O60813 436 aa10.45□□□□□ -0.74
DDX41-211ENST00000510171 CPNE6O95741 557 aa10.45□□□□□ -0.74
DDX41-211ENST00000510171 ELFN1P0C7U0 828 aa10.45□□□□□ -0.74
DDX41-211ENST00000510171 UNGP13051 313 aaPredicted RBP10.45□□□□□ -0.74
DDX41-211ENST00000510171 CCL4P13236 92 aa10.45□□□□□ -0.74
DDX41-211ENST00000510171 SERPINA4P29622 427 aa10.45□□□□□ -0.74
DDX41-211ENST00000510171 ALDH4A1P30038 563 aa10.45□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms