RNA–Protein interactions for RNA: ENST00000509637.6

RAB40C-202, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB40C, Length 565 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-202ENST00000509637 PAPOLAP51003 745 aaKnown RBP16.01■□□□□ 0.15
RAB40C-202ENST00000509637 INHBCP55103 352 aa16.01■□□□□ 0.15
RAB40C-202ENST00000509637 RAD51Q06609 339 aa16.01■□□□□ 0.15
RAB40C-202ENST00000509637 ELOCQ15369 112 aa16.01■□□□□ 0.15
RAB40C-202ENST00000509637 SYCP1Q15431 976 aa16.01■□□□□ 0.15
RAB40C-202ENST00000509637 AFMIDQ63HM1 303 aa16.01■□□□□ 0.15
RAB40C-202ENST00000509637 TRIM72Q6ZMU5 477 aa16.01■□□□□ 0.15
RAB40C-202ENST00000509637 ZFAND4Q86XD8 727 aa16.01■□□□□ 0.15
RAB40C-202ENST00000509637 NRROSQ86YC3 692 aa16.01■□□□□ 0.15
RAB40C-202ENST00000509637 NPWQ8N729 165 aa16.01■□□□□ 0.15
RAB40C-202ENST00000509637 HCAR2Q8TDS4 363 aa16.01■□□□□ 0.15
RAB40C-202ENST00000509637 GLMNQ92990 594 aa16.01■□□□□ 0.15
RAB40C-202ENST00000509637 ECHDC3Q96DC8 303 aa16.01■□□□□ 0.15
RAB40C-202ENST00000509637 WDR92Q96MX6 357 aa16.01■□□□□ 0.15
RAB40C-202ENST00000509637 MCEEQ96PE7 176 aa16.01■□□□□ 0.15
RAB40C-202ENST00000509637 GFM1Q96RP9 751 aaKnown RBP16.01■□□□□ 0.15
RAB40C-202ENST00000509637 FOXJ2Q9P0K8 574 aa16.01■□□□□ 0.15
RAB40C-202ENST00000509637 UBA2Q9UBT2 640 aaPredicted RBP16.01■□□□□ 0.15
RAB40C-202ENST00000509637 KLQ9UEF7 1012 aa16.01■□□□□ 0.15
RAB40C-202ENST00000509637 ACSL6Q9UKU0 697 aa16.01■□□□□ 0.15
RAB40C-202ENST00000509637 ATP8A1Q9Y2Q0 1164 aa16.01■□□□□ 0.15
RAB40C-202ENST00000509637 PCDHGA7Q9Y5G6 932 aa16.01■□□□□ 0.15
RAB40C-202ENST00000509637 DGKBQ9Y6T7 804 aa16.01■□□□□ 0.15
RAB40C-202ENST00000509637 TRAFD1O14545 582 aaPredicted RBP16■□□□□ 0.15
RAB40C-202ENST00000509637 TRIM23P36406 574 aa16■□□□□ 0.15
RAB40C-202ENST00000509637 STAT1P42224 750 aa16■□□□□ 0.15
RAB40C-202ENST00000509637 MLLT3P42568 568 aaPredicted RBP16■□□□□ 0.15
RAB40C-202ENST00000509637 COPB1P53618 953 aaKnown RBP16■□□□□ 0.15
RAB40C-202ENST00000509637 B4GALNT1Q00973 533 aa16■□□□□ 0.15
RAB40C-202ENST00000509637 MTM1Q13496 603 aa16■□□□□ 0.15
RAB40C-202ENST00000509637 HLTFQ14527 1009 aaKnown RBP eCLIP16■□□□□ 0.15
RAB40C-202ENST00000509637 PARP15Q460N3 678 aa16■□□□□ 0.15
RAB40C-202ENST00000509637 EFHC2Q5JST6 749 aa16■□□□□ 0.15
RAB40C-202ENST00000509637 ZNF574Q6ZN55 896 aaPredicted RBP16■□□□□ 0.15
RAB40C-202ENST00000509637 SRLQ86TD4 932 aa16■□□□□ 0.15
RAB40C-202ENST00000509637 VASH2Q86V25 355 aa16■□□□□ 0.15
RAB40C-202ENST00000509637 CCNJLQ8IV13 435 aa16■□□□□ 0.15
RAB40C-202ENST00000509637 SLITRK4Q8IW52 837 aa16■□□□□ 0.15
RAB40C-202ENST00000509637 MCOLN2Q8IZK6 566 aa16■□□□□ 0.15
RAB40C-202ENST00000509637 WDR48Q8TAF3 677 aa16■□□□□ 0.15
RAB40C-202ENST00000509637 HTR3CQ8WXA8 447 aa16■□□□□ 0.15
RAB40C-202ENST00000509637 EXTL1Q92935 676 aa16■□□□□ 0.15
RAB40C-202ENST00000509637 PMEPA1Q969W9 287 aa16■□□□□ 0.15
RAB40C-202ENST00000509637 KCTD15Q96SI1 283 aaPredicted RBP16■□□□□ 0.15
RAB40C-202ENST00000509637 AGPAT1Q99943 283 aa16■□□□□ 0.15
RAB40C-202ENST00000509637 SEMA6CQ9H3T2 930 aa16■□□□□ 0.15
RAB40C-202ENST00000509637 SPATS2LQ9NUQ6 558 aaKnown RBP16■□□□□ 0.15
RAB40C-202ENST00000509637 PISDQ9UG56 409 aa16■□□□□ 0.15
RAB40C-202ENST00000509637 PRAMEF33A0A0G2JMD5 474 aa15.99■□□□□ 0.15
RAB40C-202ENST00000509637 A0A0U1RQS6 177 aa15.99■□□□□ 0.15
RAB40C-202ENST00000509637 TMEM110-MUSTN1A8MSY1 372 aa15.99■□□□□ 0.15
RAB40C-202ENST00000509637 C9orf172C9J069 976 aa15.99■□□□□ 0.15
RAB40C-202ENST00000509637 PRAMEF10O60809 474 aa15.99■□□□□ 0.15
RAB40C-202ENST00000509637 TNFP01375 233 aa15.99■□□□□ 0.15
RAB40C-202ENST00000509637 ALPIP09923 528 aa15.99■□□□□ 0.15
RAB40C-202ENST00000509637 NSFP46459 744 aaKnown RBP15.99■□□□□ 0.15
RAB40C-202ENST00000509637 BLKP51451 505 aa15.99■□□□□ 0.15
RAB40C-202ENST00000509637 CYP4F2P78329 520 aa15.99■□□□□ 0.15
RAB40C-202ENST00000509637 ELP6Q0PNE2 266 aa15.99■□□□□ 0.15
RAB40C-202ENST00000509637 C16orf72Q14CZ0 275 aa15.99■□□□□ 0.15
RAB40C-202ENST00000509637 CERCAMQ5T4B2 595 aa15.99■□□□□ 0.15
RAB40C-202ENST00000509637 SPRED1Q7Z699 444 aa15.99■□□□□ 0.15
RAB40C-202ENST00000509637 JAMLQ86YT9 394 aa15.99■□□□□ 0.15
RAB40C-202ENST00000509637 CBARPQ8N350 705 aaPredicted RBP15.99■□□□□ 0.15
RAB40C-202ENST00000509637 FAM46DQ8NEK8 389 aa15.99■□□□□ 0.15
RAB40C-202ENST00000509637 CCDC97Q96F63 343 aaPredicted RBP15.99■□□□□ 0.15
RAB40C-202ENST00000509637 ZNF641Q96N77 438 aaPredicted RBP15.99■□□□□ 0.15
RAB40C-202ENST00000509637 CNPY3Q9BT09 278 aa15.99■□□□□ 0.15
RAB40C-202ENST00000509637 C1QTNF7Q9BXJ2 289 aa15.99■□□□□ 0.15
RAB40C-202ENST00000509637 NUP62CLQ9H1M0 184 aa15.99■□□□□ 0.15
RAB40C-202ENST00000509637 APPL1Q9UKG1 709 aa15.99■□□□□ 0.15
RAB40C-202ENST00000509637 DOLKQ9UPQ8 538 aa15.99■□□□□ 0.15
RAB40C-202ENST00000509637 LOXL2Q9Y4K0 774 aa15.99■□□□□ 0.15
RAB40C-202ENST00000509637 SDK2Q58EX2 2172 aa15.99■□□□□ 0.15
RAB40C-202ENST00000509637 ATMINO43313 823 aaPredicted RBP15.98■□□□□ 0.15
RAB40C-202ENST00000509637 CALB1P05937 261 aa15.98■□□□□ 0.15
RAB40C-202ENST00000509637 CCL4P13236 92 aa15.98■□□□□ 0.15
RAB40C-202ENST00000509637 CSNK1DP48730 415 aa15.98■□□□□ 0.15
RAB40C-202ENST00000509637 SUOXP51687 545 aa15.98■□□□□ 0.15
RAB40C-202ENST00000509637 MAZP56270 477 aaKnown RBP15.98■□□□□ 0.15
RAB40C-202ENST00000509637 KIAA1024LP59773 190 aa15.98■□□□□ 0.15
RAB40C-202ENST00000509637 DNAJC24Q6P3W2 148 aa15.98■□□□□ 0.15
RAB40C-202ENST00000509637 RFLNAQ6ZTI6 216 aa15.98■□□□□ 0.15
RAB40C-202ENST00000509637 IRF2BP2Q7Z5L9 587 aa15.98■□□□□ 0.15
RAB40C-202ENST00000509637 C17orf82Q86X59 251 aaPredicted RBP15.98■□□□□ 0.15
RAB40C-202ENST00000509637 GKN2Q86XP6 184 aa15.98■□□□□ 0.15
RAB40C-202ENST00000509637 DTX1Q86Y01 620 aa15.98■□□□□ 0.15
RAB40C-202ENST00000509637 PGBD5Q8N414 524 aa15.98■□□□□ 0.15
RAB40C-202ENST00000509637 OR56A4Q8NGH8 313 aa15.98■□□□□ 0.15
RAB40C-202ENST00000509637 PATE1Q8WXA2 126 aa15.98■□□□□ 0.15
RAB40C-202ENST00000509637 USP7Q93009 1102 aa15.98■□□□□ 0.15
RAB40C-202ENST00000509637 SMIM14Q96QK8 99 aa15.98■□□□□ 0.15
RAB40C-202ENST00000509637 NCAPGQ9BPX3 1015 aa15.98■□□□□ 0.15
RAB40C-202ENST00000509637 SNRNP25Q9BV90 132 aaKnown RBP15.98■□□□□ 0.15
RAB40C-202ENST00000509637 TRIM4Q9C037 500 aa15.98■□□□□ 0.15
RAB40C-202ENST00000509637 LMBRD1Q9NUN5 540 aa15.98■□□□□ 0.15
RAB40C-202ENST00000509637 NVLO15381 856 aaKnown RBP15.97■□□□□ 0.15
RAB40C-202ENST00000509637 SLC28A2O43868 658 aa15.97■□□□□ 0.15
RAB40C-202ENST00000509637 PEX11BO96011 259 aa15.97■□□□□ 0.15
RAB40C-202ENST00000509637 GLB1P16278 677 aa15.97■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms