RNA–Protein interactions for RNA: ENST00000509409.5

TPM3-219, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 1,248 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-219ENST00000509409 SEPT3Q9UH03 358 aa15.48■□□□□ 0.07
TPM3-219ENST00000509409 MOSPD1Q9UJG1 213 aa15.48■□□□□ 0.07
TPM3-219ENST00000509409 ENTPD2Q9Y5L3 495 aa15.48■□□□□ 0.07
TPM3-219ENST00000509409 A0A1W2PQC6 194 aa15.47■□□□□ 0.07
TPM3-219ENST00000509409 CFAP69A5D8W1 941 aa15.47■□□□□ 0.07
TPM3-219ENST00000509409 H3BRJ5 948 aa15.47■□□□□ 0.07
TPM3-219ENST00000509409 CACNB4O00305 520 aaPredicted RBP15.47■□□□□ 0.07
TPM3-219ENST00000509409 LRCH4O75427 683 aa15.47■□□□□ 0.07
TPM3-219ENST00000509409 DXOO77932 396 aaKnown RBP15.47■□□□□ 0.07
TPM3-219ENST00000509409 RECQL5O94762 991 aaPredicted RBP15.47■□□□□ 0.07
TPM3-219ENST00000509409 ELFN1P0C7U0 828 aa15.47■□□□□ 0.07
TPM3-219ENST00000509409 MYBL1P10243 752 aa15.47■□□□□ 0.07
TPM3-219ENST00000509409 ARL4AP40617 200 aa15.47■□□□□ 0.07
TPM3-219ENST00000509409 PRKCIP41743 596 aa15.47■□□□□ 0.07
TPM3-219ENST00000509409 LBRQ14739 615 aaKnown RBP15.47■□□□□ 0.07
TPM3-219ENST00000509409 ACOX1Q15067 660 aa15.47■□□□□ 0.07
TPM3-219ENST00000509409 CAVIN1Q6NZI2 390 aaKnown RBP15.47■□□□□ 0.07
TPM3-219ENST00000509409 SDR16C5Q8N3Y7 309 aa15.47■□□□□ 0.07
TPM3-219ENST00000509409 ARL10Q8N8L6 244 aa15.47■□□□□ 0.07
TPM3-219ENST00000509409 PLA2G15Q8NCC3 412 aa15.47■□□□□ 0.07
TPM3-219ENST00000509409 PCDH19Q8TAB3 1148 aa15.47■□□□□ 0.07
TPM3-219ENST00000509409 KCNE4Q8WWG9 221 aa15.47■□□□□ 0.07
TPM3-219ENST00000509409 SLC39A7Q92504 469 aa15.47■□□□□ 0.07
TPM3-219ENST00000509409 HSPH1Q92598 858 aa15.47■□□□□ 0.07
TPM3-219ENST00000509409 HIC2Q96JB3 615 aa15.47■□□□□ 0.07
TPM3-219ENST00000509409 CHD5Q8TDI0 1954 aa15.47■□□□□ 0.07
TPM3-219ENST00000509409 A0A1B0GTH6 734 aa15.46■□□□□ 0.07
TPM3-219ENST00000509409 TTC24A2A3L6 582 aaPredicted RBP15.46■□□□□ 0.07
TPM3-219ENST00000509409 KLK10O43240 276 aa15.46■□□□□ 0.07
TPM3-219ENST00000509409 AMPD1P23109 780 aa15.46■□□□□ 0.07
TPM3-219ENST00000509409 ZNF235Q14590 738 aa15.46■□□□□ 0.07
TPM3-219ENST00000509409 AGERQ15109 404 aa15.46■□□□□ 0.07
TPM3-219ENST00000509409 SMTNL2Q2TAL5 461 aa15.46■□□□□ 0.07
TPM3-219ENST00000509409 BOLA3Q53S33 107 aa15.46■□□□□ 0.07
TPM3-219ENST00000509409 TDRD12Q587J7 1177 aaKnown RBP15.46■□□□□ 0.07
TPM3-219ENST00000509409 TMCO4Q5TGY1 634 aa15.46■□□□□ 0.07
TPM3-219ENST00000509409 E4F1Q66K89 784 aaPredicted RBP15.46■□□□□ 0.07
TPM3-219ENST00000509409 LIPIQ6XZB0 460 aa15.46■□□□□ 0.07
TPM3-219ENST00000509409 TAF8Q7Z7C8 310 aa15.46■□□□□ 0.07
TPM3-219ENST00000509409 TP53INP2Q8IXH6 220 aa15.46■□□□□ 0.07
TPM3-219ENST00000509409 NPWQ8N729 165 aa15.46■□□□□ 0.07
TPM3-219ENST00000509409 KYQ8NBH2 561 aa15.46■□□□□ 0.07
TPM3-219ENST00000509409 WDR36Q8NI36 951 aaKnown RBP15.46■□□□□ 0.07
TPM3-219ENST00000509409 PDCD6IPQ8WUM4 868 aaKnown RBP15.46■□□□□ 0.07
TPM3-219ENST00000509409 NSMCE1Q8WV22 266 aa15.46■□□□□ 0.07
TPM3-219ENST00000509409 SLC46A1Q96NT5 459 aa15.46■□□□□ 0.07
TPM3-219ENST00000509409 WDR70Q9NW82 654 aa15.46■□□□□ 0.07
TPM3-219ENST00000509409 LOC400499M0QZD8 3231 aa15.46■□□□□ 0.07
TPM3-219ENST00000509409 IGSF10Q6WRI0 2623 aa15.45■□□□□ 0.06
TPM3-219ENST00000509409 TEX51A0A1B0GUA7 166 aa15.45■□□□□ 0.06
TPM3-219ENST00000509409 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP15.45■□□□□ 0.06
TPM3-219ENST00000509409 CASC3O15234 703 aaKnown RBP15.45■□□□□ 0.06
TPM3-219ENST00000509409 PRB1P04280 392 aa15.45■□□□□ 0.06
TPM3-219ENST00000509409 KELP23276 732 aa15.45■□□□□ 0.06
TPM3-219ENST00000509409 PCK1P35558 622 aa15.45■□□□□ 0.06
TPM3-219ENST00000509409 UCNP55089 124 aa15.45■□□□□ 0.06
TPM3-219ENST00000509409 AP1S1P61966 158 aa15.45■□□□□ 0.06
TPM3-219ENST00000509409 TPM4P67936 248 aa15.45■□□□□ 0.06
TPM3-219ENST00000509409 CCL7P80098 99 aa15.45■□□□□ 0.06
TPM3-219ENST00000509409 SLC10A7Q0GE19 358 aa15.45■□□□□ 0.06
TPM3-219ENST00000509409 C19orf57Q0VDD7 668 aa15.45■□□□□ 0.06
TPM3-219ENST00000509409 DPYSQ14117 519 aa15.45■□□□□ 0.06
TPM3-219ENST00000509409 NR1I3Q14994 352 aa15.45■□□□□ 0.06
TPM3-219ENST00000509409 ARHGAP40Q5TG30 622 aa15.45■□□□□ 0.06
TPM3-219ENST00000509409 DENND2CQ68D51 928 aa15.45■□□□□ 0.06
TPM3-219ENST00000509409 TMCO3Q6UWJ1 677 aa15.45■□□□□ 0.06
TPM3-219ENST00000509409 NYAP1Q6ZVC0 841 aa15.45■□□□□ 0.06
TPM3-219ENST00000509409 CYP4V2Q6ZWL3 525 aaPredicted RBP15.45■□□□□ 0.06
TPM3-219ENST00000509409 DPPA4Q7L190 304 aa15.45■□□□□ 0.06
TPM3-219ENST00000509409 BBS5Q8N3I7 341 aa15.45■□□□□ 0.06
TPM3-219ENST00000509409 ARL14Q8N4G2 192 aa15.45■□□□□ 0.06
TPM3-219ENST00000509409 FAM46DQ8NEK8 389 aa15.45■□□□□ 0.06
TPM3-219ENST00000509409 OR6C4Q8NGE1 309 aa15.45■□□□□ 0.06
TPM3-219ENST00000509409 OR56A4Q8NGH8 313 aa15.45■□□□□ 0.06
TPM3-219ENST00000509409 OR1E3Q8WZA6 343 aa15.45■□□□□ 0.06
TPM3-219ENST00000509409 FUBP1Q96AE4 644 aaKnown RBP15.45■□□□□ 0.06
TPM3-219ENST00000509409 CCDC74AQ96AQ1 378 aa15.45■□□□□ 0.06
TPM3-219ENST00000509409 ECHDC3Q96DC8 303 aa15.45■□□□□ 0.06
TPM3-219ENST00000509409 ZNF599Q96NL3 588 aa15.45■□□□□ 0.06
TPM3-219ENST00000509409 PSKH2Q96QS6 385 aa15.45■□□□□ 0.06
TPM3-219ENST00000509409 GFM1Q96RP9 751 aaKnown RBP15.45■□□□□ 0.06
TPM3-219ENST00000509409 DPH1Q9BZG8 443 aa15.45■□□□□ 0.06
TPM3-219ENST00000509409 ASCL3Q9NQ33 180 aa15.45■□□□□ 0.06
TPM3-219ENST00000509409 PCDHGC4Q9Y5F7 938 aa15.45■□□□□ 0.06
TPM3-219ENST00000509409 SMG1Q96Q15 3661 aaKnown RBP15.45■□□□□ 0.06
TPM3-219ENST00000509409 BAHCC1Q9P281 2608 aa15.44■□□□□ 0.06
TPM3-219ENST00000509409 CCDC187A0A096LP49 1063 aa15.44■□□□□ 0.06
TPM3-219ENST00000509409 TMEM202A6NGA9 273 aa15.44■□□□□ 0.06
TPM3-219ENST00000509409 TK2O00142 265 aa15.44■□□□□ 0.06
TPM3-219ENST00000509409 TRAFD1O14545 582 aaPredicted RBP15.44■□□□□ 0.06
TPM3-219ENST00000509409 ATXN7O15265 892 aaPredicted RBP15.44■□□□□ 0.06
TPM3-219ENST00000509409 TNFSF15O95150 251 aa15.44■□□□□ 0.06
TPM3-219ENST00000509409 NFKBIAP25963 317 aa15.44■□□□□ 0.06
TPM3-219ENST00000509409 IL1R2P27930 398 aa15.44■□□□□ 0.06
TPM3-219ENST00000509409 SSR1P43307 286 aaKnown RBP15.44■□□□□ 0.06
TPM3-219ENST00000509409 TMPRSS3P57727 454 aa15.44■□□□□ 0.06
TPM3-219ENST00000509409 KIAA1024LP59773 190 aa15.44■□□□□ 0.06
TPM3-219ENST00000509409 RALGDSQ12967 914 aa15.44■□□□□ 0.06
TPM3-219ENST00000509409 NFKBIBQ15653 356 aa15.44■□□□□ 0.06
TPM3-219ENST00000509409 POLNQ7Z5Q5 900 aa15.44■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 76.3 ms