RNA–Protein interactions for RNA: ENST00000509162.1

TOPBP1-207, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 2

Gene TOPBP1, Length 811 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-207ENST00000509162 CASKIN2Q8WXE0 1202 aa7.27□□□□□ -1.25
TOPBP1-207ENST00000509162 SNX19Q92543 992 aa7.27□□□□□ -1.25
TOPBP1-207ENST00000509162 TADA1Q96BN2 335 aa7.27□□□□□ -1.25
TOPBP1-207ENST00000509162 TSGA13Q96PP4 275 aa7.27□□□□□ -1.25
TOPBP1-207ENST00000509162 QKIQ96PU8 341 aaKnown RBP eCLIP7.27□□□□□ -1.253e-11■■■■□ 21.5
TOPBP1-207ENST00000509162 IL12RB2Q99665 862 aa7.27□□□□□ -1.25
TOPBP1-207ENST00000509162 NCAPGQ9BPX3 1015 aa7.27□□□□□ -1.25
TOPBP1-207ENST00000509162 CINPQ9BW66 212 aaPredicted RBP7.27□□□□□ -1.25
TOPBP1-207ENST00000509162 MIR1-1HGQ9H1L0 117 aa7.27□□□□□ -1.25
TOPBP1-207ENST00000509162 PCED1AQ9H1Q7 454 aa7.27□□□□□ -1.25
TOPBP1-207ENST00000509162 PCDH12Q9NPG4 1184 aa7.27□□□□□ -1.25
TOPBP1-207ENST00000509162 RAB23Q9ULC3 237 aa7.27□□□□□ -1.25
TOPBP1-207ENST00000509162 SCML1Q9UN30 329 aa7.27□□□□□ -1.25
TOPBP1-207ENST00000509162 BTBD3Q9Y2F9 522 aa7.27□□□□□ -1.25
TOPBP1-207ENST00000509162 COQ6Q9Y2Z9 468 aa7.27□□□□□ -1.25
TOPBP1-207ENST00000509162 SNX11Q9Y5W9 270 aa7.27□□□□□ -1.25
TOPBP1-207ENST00000509162 CNOT1A5YKK6 2376 aaKnown RBP7.27□□□□□ -1.25
TOPBP1-207ENST00000509162 CELSR3Q9NYQ7 3312 aa7.27□□□□□ -1.25
TOPBP1-207ENST00000509162 CEP295Q9C0D2 2601 aa7.26□□□□□ -1.25
TOPBP1-207ENST00000509162 NPIPB15A6NHN6 443 aaPredicted RBP7.26□□□□□ -1.25
TOPBP1-207ENST00000509162 USP27XA6NNY8 438 aa7.26□□□□□ -1.25
TOPBP1-207ENST00000509162 C4orf47A7E2U8 309 aa7.26□□□□□ -1.25
TOPBP1-207ENST00000509162 UPK3BL1B0FP48 263 aa7.26□□□□□ -1.25
TOPBP1-207ENST00000509162 UPK3BL2E5RIL1 263 aa7.26□□□□□ -1.25
TOPBP1-207ENST00000509162 F5H423 210 aaPredicted RBP7.26□□□□□ -1.25
TOPBP1-207ENST00000509162 APOL1O14791 398 aa7.26□□□□□ -1.25
TOPBP1-207ENST00000509162 SLC30A4O14863 429 aa7.26□□□□□ -1.25
TOPBP1-207ENST00000509162 GIPC1O14908 333 aa7.26□□□□□ -1.25
TOPBP1-207ENST00000509162 BCAT2O15382 392 aaPredicted RBP7.26□□□□□ -1.25
TOPBP1-207ENST00000509162 DAPK3O43293 454 aa7.26□□□□□ -1.25
TOPBP1-207ENST00000509162 AP1G1O43747 822 aa7.26□□□□□ -1.25
TOPBP1-207ENST00000509162 NDUFS2O75306 463 aa7.26□□□□□ -1.25
TOPBP1-207ENST00000509162 CFIP05156 583 aa7.26□□□□□ -1.25
TOPBP1-207ENST00000509162 PDHA1P08559 390 aa7.26□□□□□ -1.25
TOPBP1-207ENST00000509162 SERPINF2P08697 491 aa7.26□□□□□ -1.25
TOPBP1-207ENST00000509162 PYGMP11217 842 aa7.26□□□□□ -1.25
TOPBP1-207ENST00000509162 CD59P13987 128 aa7.26□□□□□ -1.25
TOPBP1-207ENST00000509162 PTPN7P35236 360 aa7.26□□□□□ -1.25
TOPBP1-207ENST00000509162 HOXD12P35452 270 aa7.26□□□□□ -1.25
TOPBP1-207ENST00000509162 NNMTP40261 264 aa7.26□□□□□ -1.25
TOPBP1-207ENST00000509162 GRIA4P48058 902 aa7.26□□□□□ -1.25
TOPBP1-207ENST00000509162 CSNK1DP48730 415 aa7.26□□□□□ -1.25
TOPBP1-207ENST00000509162 CSNK1EP49674 416 aaKnown RBP7.26□□□□□ -1.25
TOPBP1-207ENST00000509162 LIMK1P53667 647 aa7.26□□□□□ -1.25
TOPBP1-207ENST00000509162 NXPH1P58417 271 aa7.26□□□□□ -1.25
TOPBP1-207ENST00000509162 SNRPD1P62314 119 aaKnown RBP7.26□□□□□ -1.25
TOPBP1-207ENST00000509162 IL9RQ01113 521 aa7.26□□□□□ -1.25
TOPBP1-207ENST00000509162 LMNB2Q03252 620 aa7.26□□□□□ -1.25
TOPBP1-207ENST00000509162 KLF1Q13351 362 aaPredicted RBP7.26□□□□□ -1.25
TOPBP1-207ENST00000509162 SIX1Q15475 284 aaPredicted RBP7.26□□□□□ -1.25
TOPBP1-207ENST00000509162 SPA17Q15506 151 aa7.26□□□□□ -1.25
TOPBP1-207ENST00000509162 PPP2R5EQ16537 467 aa7.26□□□□□ -1.25
TOPBP1-207ENST00000509162 PRAMEF14Q5SWL7 426 aa7.26□□□□□ -1.25
TOPBP1-207ENST00000509162 STPG1Q5TH74 334 aa7.26□□□□□ -1.25
TOPBP1-207ENST00000509162 NAPEPLDQ6IQ20 393 aa7.26□□□□□ -1.25
TOPBP1-207ENST00000509162 GDPD4Q6W3E5 623 aa7.26□□□□□ -1.25
TOPBP1-207ENST00000509162 BBS12Q6ZW61 710 aa7.26□□□□□ -1.25
TOPBP1-207ENST00000509162 DSG4Q86SJ6 1040 aa7.26□□□□□ -1.25
TOPBP1-207ENST00000509162 PIP4P1Q86T03 277 aa7.26□□□□□ -1.25
TOPBP1-207ENST00000509162 DAAM2Q86T65 1068 aa7.26□□□□□ -1.25
TOPBP1-207ENST00000509162 SRLQ86TD4 932 aa7.26□□□□□ -1.25
TOPBP1-207ENST00000509162 PRPF39Q86UA1 669 aaKnown RBP7.26□□□□□ -1.25
TOPBP1-207ENST00000509162 HORMAD1Q86X24 394 aa7.26□□□□□ -1.25
TOPBP1-207ENST00000509162 RFX6Q8HWS3 928 aa7.26□□□□□ -1.25
TOPBP1-207ENST00000509162 RYBPQ8N488 228 aaPredicted RBP7.26□□□□□ -1.25
TOPBP1-207ENST00000509162 MINDY1Q8N5J2 469 aa7.26□□□□□ -1.25
TOPBP1-207ENST00000509162 LZTR1Q8N653 840 aa7.26□□□□□ -1.25
TOPBP1-207ENST00000509162 ZSCAN1Q8NBB4 408 aa7.26□□□□□ -1.25
TOPBP1-207ENST00000509162 TP53I13Q8NBR0 393 aaPredicted RBP7.26□□□□□ -1.25
TOPBP1-207ENST00000509162 KCTD6Q8NC69 237 aa7.26□□□□□ -1.25
TOPBP1-207ENST00000509162 OR13H1Q8NG92 308 aa7.26□□□□□ -1.25
TOPBP1-207ENST00000509162 GANCQ8TET4 914 aa7.26□□□□□ -1.25
TOPBP1-207ENST00000509162 ZDHHC1Q8WTX9 485 aa7.26□□□□□ -1.25
TOPBP1-207ENST00000509162 FATE1Q969F0 183 aa7.26□□□□□ -1.25
TOPBP1-207ENST00000509162 HES6Q96HZ4 224 aa7.26□□□□□ -1.25
TOPBP1-207ENST00000509162 BMFQ96LC9 184 aa7.26□□□□□ -1.25
TOPBP1-207ENST00000509162 ZNF830Q96NB3 372 aaPredicted RBP7.26□□□□□ -1.25
TOPBP1-207ENST00000509162 ZNF599Q96NL3 588 aa7.26□□□□□ -1.25
TOPBP1-207ENST00000509162 CAMK1GQ96NX5 476 aa7.26□□□□□ -1.25
TOPBP1-207ENST00000509162 NUDCD1Q96RS6 583 aa7.26□□□□□ -1.25
TOPBP1-207ENST00000509162 TRIB3Q96RU7 358 aa7.26□□□□□ -1.25
TOPBP1-207ENST00000509162 OMDQ99983 421 aa7.26□□□□□ -1.25
TOPBP1-207ENST00000509162 HEMGNQ9BXL5 484 aa7.26□□□□□ -1.25
TOPBP1-207ENST00000509162 TDRD1Q9BXT4 1180 aaKnown RBP7.26□□□□□ -1.25
TOPBP1-207ENST00000509162 PREBQ9HCU5 417 aa7.26□□□□□ -1.25
TOPBP1-207ENST00000509162 NT5MQ9NPB1 228 aa7.26□□□□□ -1.25
TOPBP1-207ENST00000509162 MBNL1Q9NR56 388 aaKnown RBP7.26□□□□□ -1.25
TOPBP1-207ENST00000509162 DKK3Q9UBP4 350 aa7.26□□□□□ -1.25
TOPBP1-207ENST00000509162 PYCARDQ9ULZ3 195 aa7.26□□□□□ -1.25
TOPBP1-207ENST00000509162 SLC6A14Q9UN76 642 aa7.26□□□□□ -1.25
TOPBP1-207ENST00000509162 ATP8A1Q9Y2Q0 1164 aa7.26□□□□□ -1.25
TOPBP1-207ENST00000509162 PCDHGC4Q9Y5F7 938 aa7.26□□□□□ -1.25
TOPBP1-207ENST00000509162 PCDHA3Q9Y5H8 950 aa7.26□□□□□ -1.25
TOPBP1-207ENST00000509162 TRPM6Q9BX84 2022 aa7.25□□□□□ -1.25
TOPBP1-207ENST00000509162 A0A1B0GTW7 788 aa7.25□□□□□ -1.25
TOPBP1-207ENST00000509162 MED19A0JLT2 244 aaPredicted RBP7.25□□□□□ -1.25
TOPBP1-207ENST00000509162 DCDC2BA2VCK2 349 aa7.25□□□□□ -1.25
TOPBP1-207ENST00000509162 POM121BA6NF01 834 aa7.25□□□□□ -1.25
TOPBP1-207ENST00000509162 IGLON5A6NGN9 336 aa7.25□□□□□ -1.25
TOPBP1-207ENST00000509162 K7ESM1 405 aa7.25□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms