RNA–Protein interactions for RNA: ENST00000509006.1

DEPDC1B-204, Transcript of DEP domain containing 1B, humanhuman

TSL 4

Gene DEPDC1B, Length 651 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1B-204ENST00000509006 DUSP28Q4G0W2 176 aa2.5□□□□□ -2.01
DEPDC1B-204ENST00000509006 RAP1GAP2Q684P5 730 aa2.5□□□□□ -2.01
DEPDC1B-204ENST00000509006 HIST2H2BCQ6DN03 193 aa2.5□□□□□ -2.01
DEPDC1B-204ENST00000509006 RPUSD3Q6P087 351 aaKnown RBP2.5□□□□□ -2.01
DEPDC1B-204ENST00000509006 DENND1BQ6P3S1 775 aa2.5□□□□□ -2.01
DEPDC1B-204ENST00000509006 ZNF449Q6P9G9 518 aa2.5□□□□□ -2.01
DEPDC1B-204ENST00000509006 CNSTQ6PJW8 725 aa2.5□□□□□ -2.01
DEPDC1B-204ENST00000509006 PRSS57Q6UWY2 283 aa2.5□□□□□ -2.01
DEPDC1B-204ENST00000509006 IKBIPQ70UQ0 350 aa2.5□□□□□ -2.01
DEPDC1B-204ENST00000509006 CHST3Q7LGC8 479 aa2.5□□□□□ -2.01
DEPDC1B-204ENST00000509006 SZRD1Q7Z422 152 aa2.5□□□□□ -2.01
DEPDC1B-204ENST00000509006 METTL23Q86XA0 190 aa2.5□□□□□ -2.01
DEPDC1B-204ENST00000509006 ADGRF3Q8IZF5 1079 aa2.5□□□□□ -2.01
DEPDC1B-204ENST00000509006 C10orf53Q8N6V4 93 aa2.5□□□□□ -2.01
DEPDC1B-204ENST00000509006 SPC24Q8NBT2 197 aa2.5□□□□□ -2.01
DEPDC1B-204ENST00000509006 TNIP2Q8NFZ5 429 aa2.5□□□□□ -2.01
DEPDC1B-204ENST00000509006 SCAMP5Q8TAC9 235 aa2.5□□□□□ -2.01
DEPDC1B-204ENST00000509006 GDAP1Q8TB36 358 aa2.5□□□□□ -2.01
DEPDC1B-204ENST00000509006 MGARPQ8TDB4 240 aa2.5□□□□□ -2.01
DEPDC1B-204ENST00000509006 DEPDC1BQ8WUY9 529 aa2.5□□□□□ -2.01
DEPDC1B-204ENST00000509006 HMGB4Q8WW32 186 aa2.5□□□□□ -2.01
DEPDC1B-204ENST00000509006 NPIPB3Q92617 1050 aa2.5□□□□□ -2.01
DEPDC1B-204ENST00000509006 SMARCE1Q969G3 411 aa2.5□□□□□ -2.01
DEPDC1B-204ENST00000509006 KIF1BPQ96EK5 621 aa2.5□□□□□ -2.01
DEPDC1B-204ENST00000509006 IWS1Q96ST2 819 aa2.5□□□□□ -2.01
DEPDC1B-204ENST00000509006 EIF3CQ99613 913 aaKnown RBP2.5□□□□□ -2.01
DEPDC1B-204ENST00000509006 CITED2Q99967 270 aaPredicted RBP2.5□□□□□ -2.01
DEPDC1B-204ENST00000509006 PAAF1Q9BRP4 392 aa2.5□□□□□ -2.01
DEPDC1B-204ENST00000509006 MXD3Q9BW11 206 aa2.5□□□□□ -2.01
DEPDC1B-204ENST00000509006 APOL6Q9BWW8 343 aa2.5□□□□□ -2.01
DEPDC1B-204ENST00000509006 MRPL1Q9BYD6 325 aaKnown RBP2.5□□□□□ -2.01
DEPDC1B-204ENST00000509006 INTS2Q9H0H0 1204 aaKnown RBP2.5□□□□□ -2.01
DEPDC1B-204ENST00000509006 KAT14Q9H8E8 782 aa2.5□□□□□ -2.01
DEPDC1B-204ENST00000509006 ADPRHL2Q9NX46 363 aa2.5□□□□□ -2.01
DEPDC1B-204ENST00000509006 HCN3Q9P1Z3 774 aa2.5□□□□□ -2.01
DEPDC1B-204ENST00000509006 MARCH4Q9P2E8 410 aaPredicted RBP2.5□□□□□ -2.01
DEPDC1B-204ENST00000509006 PLEKHB1Q9UF11 243 aaPredicted RBP2.5□□□□□ -2.01
DEPDC1B-204ENST00000509006 SEC63Q9UGP8 760 aaKnown RBP2.5□□□□□ -2.01
DEPDC1B-204ENST00000509006 LIMA1Q9UHB6 759 aaKnown RBP2.5□□□□□ -2.01
DEPDC1B-204ENST00000509006 PCDHGB4Q9UN71 923 aa2.5□□□□□ -2.01
DEPDC1B-204ENST00000509006 PA2G4Q9UQ80 394 aaKnown RBP2.5□□□□□ -2.01
DEPDC1B-204ENST00000509006 CAMK2AQ9UQM7 478 aa2.5□□□□□ -2.01
DEPDC1B-204ENST00000509006 LMTK3Q96Q04 1460 aa2.5□□□□□ -2.01
DEPDC1B-204ENST00000509006 A0A1B0GVT2 93 aa2.49□□□□□ -2.01
DEPDC1B-204ENST00000509006 OR6C75A6NL08 312 aa2.49□□□□□ -2.01
DEPDC1B-204ENST00000509006 PEX12O00623 359 aa2.49□□□□□ -2.01
DEPDC1B-204ENST00000509006 BCAT2O15382 392 aaPredicted RBP2.49□□□□□ -2.01
DEPDC1B-204ENST00000509006 SPRY3O43610 288 aa2.49□□□□□ -2.01
DEPDC1B-204ENST00000509006 NEURL1O76050 574 aa2.49□□□□□ -2.01
DEPDC1B-204ENST00000509006 CCDC175P0C221 793 aa2.49□□□□□ -2.01
DEPDC1B-204ENST00000509006 EEF2P13639 858 aaKnown RBP2.49□□□□□ -2.01
DEPDC1B-204ENST00000509006 P4HA1P13674 534 aa2.49□□□□□ -2.01
DEPDC1B-204ENST00000509006 PKMP14618 531 aaKnown RBP2.49□□□□□ -2.01
DEPDC1B-204ENST00000509006 PECAM1P16284 738 aaPredicted RBP2.49□□□□□ -2.01
DEPDC1B-204ENST00000509006 THPOP40225 353 aa2.49□□□□□ -2.01
DEPDC1B-204ENST00000509006 PCYT1AP49585 367 aa2.49□□□□□ -2.01
DEPDC1B-204ENST00000509006 COMPP49747 757 aaPredicted RBP2.49□□□□□ -2.01
DEPDC1B-204ENST00000509006 PDLIM4P50479 330 aa2.49□□□□□ -2.01
DEPDC1B-204ENST00000509006 PNLIPRP1P54315 467 aa2.49□□□□□ -2.01
DEPDC1B-204ENST00000509006 SLC37A1P57057 533 aa2.49□□□□□ -2.01
DEPDC1B-204ENST00000509006 EVCP57679 992 aa2.49□□□□□ -2.01
DEPDC1B-204ENST00000509006 SCN1BQ07699 218 aa2.49□□□□□ -2.01
DEPDC1B-204ENST00000509006 DDR1Q08345 913 aa2.49□□□□□ -2.01
DEPDC1B-204ENST00000509006 PTPN14Q15678 1187 aa2.49□□□□□ -2.01
DEPDC1B-204ENST00000509006 IZUMO4Q1ZYL8 232 aa2.49□□□□□ -2.01
DEPDC1B-204ENST00000509006 CBWD5Q5RIA9 395 aa2.49□□□□□ -2.01
DEPDC1B-204ENST00000509006 MSANTD2Q6P1R3 559 aa2.49□□□□□ -2.01
DEPDC1B-204ENST00000509006 SLC30A9Q6PML9 568 aa2.49□□□□□ -2.01
DEPDC1B-204ENST00000509006 IL27RAQ6UWB1 636 aa2.49□□□□□ -2.01
DEPDC1B-204ENST00000509006 ABRAXAS1Q6UWZ7 409 aa2.49□□□□□ -2.01
DEPDC1B-204ENST00000509006 LIN28BQ6ZN17 250 aaKnown RBP eCLIP2.49□□□□□ -2.01
DEPDC1B-204ENST00000509006 MFSD6Q6ZSS7 791 aa2.49□□□□□ -2.01
DEPDC1B-204ENST00000509006 RASGRP2Q7LDG7 609 aa2.49□□□□□ -2.01
DEPDC1B-204ENST00000509006 GSTA5Q7RTV2 222 aa2.49□□□□□ -2.01
DEPDC1B-204ENST00000509006 ADGRA1Q86SQ6 560 aa2.49□□□□□ -2.01
DEPDC1B-204ENST00000509006 TICAM1Q8IUC6 712 aa2.49□□□□□ -2.01
DEPDC1B-204ENST00000509006 EPHX4Q8IUS5 362 aa2.49□□□□□ -2.01
DEPDC1B-204ENST00000509006 SCN4BQ8IWT1 228 aa2.49□□□□□ -2.01
DEPDC1B-204ENST00000509006 ADGRF2Q8IZF7 708 aa2.49□□□□□ -2.01
DEPDC1B-204ENST00000509006 POGLUT1Q8NBL1 392 aa2.49□□□□□ -2.01
DEPDC1B-204ENST00000509006 KCTD6Q8NC69 237 aa2.49□□□□□ -2.01
DEPDC1B-204ENST00000509006 APPL2Q8NEU8 664 aa2.49□□□□□ -2.01
DEPDC1B-204ENST00000509006 ANKRD20A12PQ8NF67 263 aa2.49□□□□□ -2.01
DEPDC1B-204ENST00000509006 GOT1L1Q8NHS2 421 aaPredicted RBP2.49□□□□□ -2.01
DEPDC1B-204ENST00000509006 PSMA8Q8TAA3 256 aa2.49□□□□□ -2.01
DEPDC1B-204ENST00000509006 SETD6Q8TBK2 473 aa2.49□□□□□ -2.01
DEPDC1B-204ENST00000509006 METTL6Q8TCB7 284 aa2.49□□□□□ -2.01
DEPDC1B-204ENST00000509006 CSGALNACT1Q8TDX6 532 aa2.49□□□□□ -2.01
DEPDC1B-204ENST00000509006 SLC22A17Q8WUG5 538 aa2.49□□□□□ -2.01
DEPDC1B-204ENST00000509006 STAMQ92783 540 aa2.49□□□□□ -2.01
DEPDC1B-204ENST00000509006 ATP6V0A1Q93050 837 aa2.49□□□□□ -2.01
DEPDC1B-204ENST00000509006 FAM149B1Q96BN6 582 aa2.49□□□□□ -2.01
DEPDC1B-204ENST00000509006 PIGSQ96S52 555 aa2.49□□□□□ -2.01
DEPDC1B-204ENST00000509006 GPATCH1Q9BRR8 931 aaKnown RBP2.49□□□□□ -2.01
DEPDC1B-204ENST00000509006 ABHD14AQ9BUJ0 271 aa2.49□□□□□ -2.01
DEPDC1B-204ENST00000509006 ITPAQ9BY32 194 aa2.49□□□□□ -2.01
DEPDC1B-204ENST00000509006 FTOQ9C0B1 505 aaKnown RBP eCLIP2.49□□□□□ -2.01
DEPDC1B-204ENST00000509006 TAOK3Q9H2K8 898 aa2.49□□□□□ -2.01
DEPDC1B-204ENST00000509006 C6orf106Q9H6K1 298 aaPredicted RBP2.49□□□□□ -2.01
DEPDC1B-204ENST00000509006 COPS7BQ9H9Q2 264 aaPredicted RBP2.49□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms