RNA–Protein interactions for RNA: ENST00000508902.5

CLDND1-220, Transcript of claudin domain containing 1, humanhuman

TSL 3

Gene CLDND1, Length 916 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-220ENST00000508902 GRPEL1Q9HAV7 217 aa18.27■□□□□ 0.52
CLDND1-220ENST00000508902 WASF3Q9UPY6 502 aa18.27■□□□□ 0.52
CLDND1-220ENST00000508902 RAI2Q9Y5P3 530 aa18.27■□□□□ 0.52
CLDND1-220ENST00000508902 HS3ST3A1Q9Y663 406 aa18.27■□□□□ 0.52
CLDND1-220ENST00000508902 TPRP12270 2363 aaKnown RBP18.26■□□□□ 0.51
CLDND1-220ENST00000508902 SCN8AQ9UQD0 1980 aa18.26■□□□□ 0.51
CLDND1-220ENST00000508902 GOLGA4Q13439 2230 aaKnown RBP18.26■□□□□ 0.51
CLDND1-220ENST00000508902 NPIPB15A6NHN6 443 aaPredicted RBP18.26■□□□□ 0.51
CLDND1-220ENST00000508902 PCDHGA12O60330 932 aa18.26■□□□□ 0.51
CLDND1-220ENST00000508902 TM7SF2O76062 418 aa18.26■□□□□ 0.51
CLDND1-220ENST00000508902 ZRANB2O95218 330 aaKnown RBP eCLIP18.26■□□□□ 0.51
CLDND1-220ENST00000508902 CPP00450 1065 aa18.26■□□□□ 0.51
CLDND1-220ENST00000508902 ADRB1P08588 477 aa18.26■□□□□ 0.51
CLDND1-220ENST00000508902 ALPIP09923 528 aa18.26■□□□□ 0.51
CLDND1-220ENST00000508902 GIMD1P0DJR0 217 aa18.26■□□□□ 0.51
CLDND1-220ENST00000508902 PYGMP11217 842 aa18.26■□□□□ 0.51
CLDND1-220ENST00000508902 SUOXP51687 545 aa18.26■□□□□ 0.51
CLDND1-220ENST00000508902 ELP6Q0PNE2 266 aa18.26■□□□□ 0.51
CLDND1-220ENST00000508902 WASHC5Q12768 1159 aa18.26■□□□□ 0.51
CLDND1-220ENST00000508902 OVGP1Q12889 678 aa18.26■□□□□ 0.51
CLDND1-220ENST00000508902 AGERQ15109 404 aa18.26■□□□□ 0.51
CLDND1-220ENST00000508902 CNGA3Q16281 694 aa18.26■□□□□ 0.51
CLDND1-220ENST00000508902 RALGPS1Q5JS13 557 aa18.26■□□□□ 0.51
CLDND1-220ENST00000508902 RFLNAQ6ZTI6 216 aa18.26■□□□□ 0.51
CLDND1-220ENST00000508902 BBS12Q6ZW61 710 aa18.26■□□□□ 0.51
CLDND1-220ENST00000508902 PTAR1Q7Z6K3 402 aaPredicted RBP18.26■□□□□ 0.51
CLDND1-220ENST00000508902 LRRC8AQ8IWT6 810 aa18.26■□□□□ 0.51
CLDND1-220ENST00000508902 RCOR2Q8IZ40 523 aa18.26■□□□□ 0.51
CLDND1-220ENST00000508902 CBARPQ8N350 705 aaPredicted RBP18.26■□□□□ 0.51
CLDND1-220ENST00000508902 PLA2G15Q8NCC3 412 aa18.26■□□□□ 0.51
CLDND1-220ENST00000508902 DENND6BQ8NEG7 585 aa18.26■□□□□ 0.51
CLDND1-220ENST00000508902 KIAA1524Q8TCG1 905 aa18.26■□□□□ 0.51
CLDND1-220ENST00000508902 PDCD6IPQ8WUM4 868 aaKnown RBP18.26■□□□□ 0.51
CLDND1-220ENST00000508902 NSMCE1Q8WV22 266 aa18.26■□□□□ 0.51
CLDND1-220ENST00000508902 TADA1Q96BN2 335 aa18.26■□□□□ 0.51
CLDND1-220ENST00000508902 TDRD1Q9BXT4 1180 aaKnown RBP18.26■□□□□ 0.51
CLDND1-220ENST00000508902 TOR4AQ9NXH8 423 aa18.26■□□□□ 0.51
CLDND1-220ENST00000508902 PPIL1Q9Y3C6 166 aa18.26■□□□□ 0.51
CLDND1-220ENST00000508902 WDFY3Q8IZQ1 3526 aa18.25■□□□□ 0.51
CLDND1-220ENST00000508902 A6NNZ2 444 aa18.25■□□□□ 0.51
CLDND1-220ENST00000508902 SDC3O75056 442 aa18.25■□□□□ 0.51
CLDND1-220ENST00000508902 CEACAM1P13688 526 aa18.25■□□□□ 0.51
CLDND1-220ENST00000508902 ZFXP17010 805 aaPredicted RBP18.25■□□□□ 0.51
CLDND1-220ENST00000508902 CTPS1P17812 591 aa18.25■□□□□ 0.51
CLDND1-220ENST00000508902 TGM2P21980 687 aa18.25■□□□□ 0.51
CLDND1-220ENST00000508902 XPAP23025 273 aaPredicted RBP18.25■□□□□ 0.51
CLDND1-220ENST00000508902 PTPN3P26045 913 aa18.25■□□□□ 0.51
CLDND1-220ENST00000508902 CD68P34810 354 aaPredicted RBP18.25■□□□□ 0.51
CLDND1-220ENST00000508902 PTPN7P35236 360 aa18.25■□□□□ 0.51
CLDND1-220ENST00000508902 AP1B1Q10567 949 aa18.25■□□□□ 0.51
CLDND1-220ENST00000508902 ZNF211Q13398 564 aaPredicted RBP18.25■□□□□ 0.51
CLDND1-220ENST00000508902 PDK1Q15118 436 aa18.25■□□□□ 0.51
CLDND1-220ENST00000508902 ZNF542PQ5EBM4 170 aa18.25■□□□□ 0.51
CLDND1-220ENST00000508902 ZSCAN30Q86W11 494 aa18.25■□□□□ 0.51
CLDND1-220ENST00000508902 BBS5Q8N3I7 341 aa18.25■□□□□ 0.51
CLDND1-220ENST00000508902 RBM41Q96IZ5 413 aaKnown RBP18.25■□□□□ 0.51
CLDND1-220ENST00000508902 FAM118BQ9BPY3 351 aa18.25■□□□□ 0.51
CLDND1-220ENST00000508902 MAK16Q9BXY0 300 aaKnown RBP18.25■□□□□ 0.51
CLDND1-220ENST00000508902 UCKL1Q9NWZ5 548 aa18.25■□□□□ 0.51
CLDND1-220ENST00000508902 AMACRQ9UHK6 382 aa18.25■□□□□ 0.51
CLDND1-220ENST00000508902 CHKBQ9Y259 395 aa18.25■□□□□ 0.51
CLDND1-220ENST00000508902 TTLL3Q9Y4R7 772 aa18.25■□□□□ 0.51
CLDND1-220ENST00000508902 ACACBO00763 2458 aa18.25■□□□□ 0.51
CLDND1-220ENST00000508902 GOLGA8CPA6NN73 597 aa18.24■□□□□ 0.51
CLDND1-220ENST00000508902 HEXIM1O94992 359 aaKnown RBP18.24■□□□□ 0.51
CLDND1-220ENST00000508902 PMLP29590 882 aa18.24■□□□□ 0.51
CLDND1-220ENST00000508902 CD86P42081 329 aa18.24■□□□□ 0.51
CLDND1-220ENST00000508902 NAP1L1P55209 391 aaKnown RBP18.24■□□□□ 0.51
CLDND1-220ENST00000508902 ITKQ08881 620 aa18.24■□□□□ 0.51
CLDND1-220ENST00000508902 KIF5AQ12840 1032 aa18.24■□□□□ 0.51
CLDND1-220ENST00000508902 EIF2B5Q13144 721 aaKnown RBP18.24■□□□□ 0.51
CLDND1-220ENST00000508902 SGCGQ13326 291 aa18.24■□□□□ 0.51
CLDND1-220ENST00000508902 SLC45A4Q5BKX6 768 aa18.24■□□□□ 0.51
CLDND1-220ENST00000508902 CFAP58Q5T655 872 aa18.24■□□□□ 0.51
CLDND1-220ENST00000508902 ERAP2Q6P179 960 aa18.24■□□□□ 0.51
CLDND1-220ENST00000508902 HSD11B1LQ7Z5J1 315 aa18.24■□□□□ 0.51
CLDND1-220ENST00000508902 CCDC50Q8IVM0 306 aa18.24■□□□□ 0.51
CLDND1-220ENST00000508902 COQ10AQ96MF6 247 aa18.24■□□□□ 0.51
CLDND1-220ENST00000508902 ZNF830Q96NB3 372 aaPredicted RBP18.24■□□□□ 0.51
CLDND1-220ENST00000508902 QKIQ96PU8 341 aaKnown RBP eCLIP18.24■□□□□ 0.513e-7■■□□□ 11.5
CLDND1-220ENST00000508902 TRIB3Q96RU7 358 aa18.24■□□□□ 0.51
CLDND1-220ENST00000508902 TCEAL2Q9H3H9 227 aaPredicted RBP18.24■□□□□ 0.51
CLDND1-220ENST00000508902 PTPRBP23467 1997 aa18.24■□□□□ 0.51
CLDND1-220ENST00000508902 CCDC66A2RUB6 948 aa18.23■□□□□ 0.51
CLDND1-220ENST00000508902 K7ESM1 405 aa18.23■□□□□ 0.51
CLDND1-220ENST00000508902 PPP1R12AO14974 1030 aaPredicted RBP18.23■□□□□ 0.51
CLDND1-220ENST00000508902 FLRT2O43155 660 aa18.23■□□□□ 0.51
CLDND1-220ENST00000508902 ARHGAP6O43182 974 aa18.23■□□□□ 0.51
CLDND1-220ENST00000508902 RECQL5O94762 991 aaPredicted RBP18.23■□□□□ 0.51
CLDND1-220ENST00000508902 VIPR1P32241 457 aa18.23■□□□□ 0.51
CLDND1-220ENST00000508902 NR2C2P49116 596 aa18.23■□□□□ 0.51
CLDND1-220ENST00000508902 TFDP2Q14188 446 aa18.23■□□□□ 0.51
CLDND1-220ENST00000508902 NOMO1Q15155 1222 aa18.23■□□□□ 0.51
CLDND1-220ENST00000508902 CDKN3Q16667 212 aa18.23■□□□□ 0.51
CLDND1-220ENST00000508902 ARMC12Q5T9G4 340 aa18.23■□□□□ 0.51
CLDND1-220ENST00000508902 ZC3H18Q86VM9 953 aaKnown RBP18.23■□□□□ 0.51
CLDND1-220ENST00000508902 SLC25A45Q8N413 288 aa18.23■□□□□ 0.51
CLDND1-220ENST00000508902 SPATA22Q8NHS9 363 aa18.23■□□□□ 0.51
CLDND1-220ENST00000508902 SETD7Q8WTS6 366 aaKnown RBP18.23■□□□□ 0.51
CLDND1-220ENST00000508902 IMP4Q96G21 291 aaKnown RBP18.23■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms