RNA–Protein interactions for RNA: ENST00000508852.5

CCHCR1-227, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 4

Gene CCHCR1, Length 589 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-227ENST00000508852 LBRQ14739 615 aaKnown RBP13.68□□□□□ -0.22
CCHCR1-227ENST00000508852 NR1I3Q14994 352 aa13.68□□□□□ -0.22
CCHCR1-227ENST00000508852 DPYSL2Q16555 572 aa13.68□□□□□ -0.22
CCHCR1-227ENST00000508852 LRRC73Q5JTD7 316 aa13.68□□□□□ -0.22
CCHCR1-227ENST00000508852 GUSBP11Q6P575 273 aa13.68□□□□□ -0.22
CCHCR1-227ENST00000508852 TMCO3Q6UWJ1 677 aa13.68□□□□□ -0.22
CCHCR1-227ENST00000508852 DPPA4Q7L190 304 aa13.68□□□□□ -0.22
CCHCR1-227ENST00000508852 GPR155Q7Z3F1 870 aa13.68□□□□□ -0.22
CCHCR1-227ENST00000508852 CAMK1DQ8IU85 385 aa13.68□□□□□ -0.22
CCHCR1-227ENST00000508852 HID1Q8IV36 788 aa13.68□□□□□ -0.22
CCHCR1-227ENST00000508852 NDUFAF2Q8N183 169 aa13.68□□□□□ -0.22
CCHCR1-227ENST00000508852 ARL14Q8N4G2 192 aa13.68□□□□□ -0.22
CCHCR1-227ENST00000508852 TSEN2Q8NCE0 465 aaKnown RBP13.68□□□□□ -0.22
CCHCR1-227ENST00000508852 TEKT4Q8WW24 435 aa13.68□□□□□ -0.22
CCHCR1-227ENST00000508852 GPATCH2LQ9NWQ4 482 aa13.68□□□□□ -0.22
CCHCR1-227ENST00000508852 RCOR3Q9P2K3 495 aaPredicted RBP13.68□□□□□ -0.22
CCHCR1-227ENST00000508852 PCDHB1Q9Y5F3 818 aa13.68□□□□□ -0.22
CCHCR1-227ENST00000508852 DDX3XO00571 662 aaKnown RBP eCLIP13.67□□□□□ -0.22
CCHCR1-227ENST00000508852 MUSKO15146 869 aa13.67□□□□□ -0.22
CCHCR1-227ENST00000508852 BUB1BO60566 1050 aaPredicted RBP13.67□□□□□ -0.22
CCHCR1-227ENST00000508852 TGM2P21980 687 aa13.67□□□□□ -0.22
CCHCR1-227ENST00000508852 CDH6P55285 790 aa13.67□□□□□ -0.22
CCHCR1-227ENST00000508852 TMPRSS3P57727 454 aa13.67□□□□□ -0.22
CCHCR1-227ENST00000508852 DPYSQ14117 519 aa13.67□□□□□ -0.22
CCHCR1-227ENST00000508852 CA9Q16790 459 aa13.67□□□□□ -0.22
CCHCR1-227ENST00000508852 TDRD12Q587J7 1177 aaKnown RBP13.67□□□□□ -0.22
CCHCR1-227ENST00000508852 TPRG1LQ5T0D9 272 aa13.67□□□□□ -0.22
CCHCR1-227ENST00000508852 ARHGAP12Q8IWW6 846 aa13.67□□□□□ -0.22
CCHCR1-227ENST00000508852 SLC35F3Q8IY50 421 aa13.67□□□□□ -0.22
CCHCR1-227ENST00000508852 RBFAQ8N0V3 343 aa13.67□□□□□ -0.22
CCHCR1-227ENST00000508852 ARFGAP1Q8N6T3 406 aa13.67□□□□□ -0.22
CCHCR1-227ENST00000508852 NIPA2Q8N8Q9 360 aa13.67□□□□□ -0.22
CCHCR1-227ENST00000508852 WDR36Q8NI36 951 aaKnown RBP13.67□□□□□ -0.22
CCHCR1-227ENST00000508852 HIC2Q96JB3 615 aa13.67□□□□□ -0.22
CCHCR1-227ENST00000508852 PEBP4Q96S96 227 aa13.67□□□□□ -0.22
CCHCR1-227ENST00000508852 STRADBQ9C0K7 418 aa13.67□□□□□ -0.22
CCHCR1-227ENST00000508852 CWC15Q9P013 229 aaKnown RBP13.67□□□□□ -0.22
CCHCR1-227ENST00000508852 MYO1AQ9UBC5 1043 aa13.67□□□□□ -0.22
CCHCR1-227ENST00000508852 IP6K2Q9UHH9 426 aa13.67□□□□□ -0.22
CCHCR1-227ENST00000508852 ASXL3Q9C0F0 2248 aa13.67□□□□□ -0.22
CCHCR1-227ENST00000508852 CCDC187A0A096LP49 1063 aa13.66□□□□□ -0.22
CCHCR1-227ENST00000508852 PSMD11O00231 422 aa13.66□□□□□ -0.22
CCHCR1-227ENST00000508852 ATMINO43313 823 aaPredicted RBP13.66□□□□□ -0.22
CCHCR1-227ENST00000508852 SERPING1P05155 500 aa13.66□□□□□ -0.22
CCHCR1-227ENST00000508852 MPOP05164 745 aa13.66□□□□□ -0.22
CCHCR1-227ENST00000508852 PCCBP05166 539 aa13.66□□□□□ -0.22
CCHCR1-227ENST00000508852 CYP2A6P11509 494 aaPredicted RBP13.66□□□□□ -0.22
CCHCR1-227ENST00000508852 PNLIPP16233 465 aa13.66□□□□□ -0.22
CCHCR1-227ENST00000508852 ITIH2P19823 946 aa13.66□□□□□ -0.22
CCHCR1-227ENST00000508852 PTMSP20962 102 aa13.66□□□□□ -0.22
CCHCR1-227ENST00000508852 CES1P23141 567 aa13.66□□□□□ -0.22
CCHCR1-227ENST00000508852 ITPKBP27987 946 aa13.66□□□□□ -0.22
CCHCR1-227ENST00000508852 TRIM23P36406 574 aa13.66□□□□□ -0.22
CCHCR1-227ENST00000508852 TLE3Q04726 772 aa13.66□□□□□ -0.22
CCHCR1-227ENST00000508852 CCDC173Q0VFZ6 552 aa13.66□□□□□ -0.22
CCHCR1-227ENST00000508852 C1orf61Q13536 156 aa13.66□□□□□ -0.22
CCHCR1-227ENST00000508852 HADHQ16836 314 aaKnown RBP13.66□□□□□ -0.22
CCHCR1-227ENST00000508852 ALG11Q2TAA5 492 aa13.66□□□□□ -0.22
CCHCR1-227ENST00000508852 CAVIN1Q6NZI2 390 aaKnown RBP13.66□□□□□ -0.22
CCHCR1-227ENST00000508852 LIPIQ6XZB0 460 aa13.66□□□□□ -0.22
CCHCR1-227ENST00000508852 SPACA3Q8IXA5 215 aa13.66□□□□□ -0.22
CCHCR1-227ENST00000508852 OR56A4Q8NGH8 313 aa13.66□□□□□ -0.22
CCHCR1-227ENST00000508852 KCNE4Q8WWG9 221 aa13.66□□□□□ -0.22
CCHCR1-227ENST00000508852 TMEM159Q96B96 161 aa13.66□□□□□ -0.22
CCHCR1-227ENST00000508852 SLC46A1Q96NT5 459 aa13.66□□□□□ -0.22
CCHCR1-227ENST00000508852 FCRL3Q96P31 734 aaPredicted RBP13.66□□□□□ -0.22
CCHCR1-227ENST00000508852 NUDCD1Q96RS6 583 aa13.66□□□□□ -0.22
CCHCR1-227ENST00000508852 RBM15Q96T37 977 aaKnown RBP eCLIP13.66□□□□□ -0.22
CCHCR1-227ENST00000508852 CCDC3Q9BQI4 270 aa13.66□□□□□ -0.22
CCHCR1-227ENST00000508852 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP13.66□□□□□ -0.22
CCHCR1-227ENST00000508852 CLPBQ9H078 707 aa13.66□□□□□ -0.22
CCHCR1-227ENST00000508852 GULP1Q9UBP9 304 aa13.66□□□□□ -0.22
CCHCR1-227ENST00000508852 PHTF1Q9UMS5 762 aa13.66□□□□□ -0.22
CCHCR1-227ENST00000508852 GPR34Q9UPC5 381 aa13.66□□□□□ -0.22
CCHCR1-227ENST00000508852 COQ6Q9Y2Z9 468 aa13.66□□□□□ -0.22
CCHCR1-227ENST00000508852 LRP4O75096 1905 aa13.66□□□□□ -0.22
CCHCR1-227ENST00000508852 RP1P56715 2156 aa13.65□□□□□ -0.22
CCHCR1-227ENST00000508852 GOLGA6L19H0YKK7 550 aa13.65□□□□□ -0.22
CCHCR1-227ENST00000508852 MYO1FO00160 1098 aa13.65□□□□□ -0.22
CCHCR1-227ENST00000508852 TRAFD1O14545 582 aaPredicted RBP13.65□□□□□ -0.22
CCHCR1-227ENST00000508852 ATXN7O15265 892 aaPredicted RBP13.65□□□□□ -0.22
CCHCR1-227ENST00000508852 HTRA2O43464 458 aaPredicted RBP13.65□□□□□ -0.22
CCHCR1-227ENST00000508852 RECQL5O94762 991 aaPredicted RBP13.65□□□□□ -0.22
CCHCR1-227ENST00000508852 PYGLP06737 847 aa13.65□□□□□ -0.22
CCHCR1-227ENST00000508852 TPM3P06753 285 aa13.65□□□□□ -0.22
CCHCR1-227ENST00000508852 MYF5P13349 255 aa13.65□□□□□ -0.22
CCHCR1-227ENST00000508852 ZBED6P86452 979 aa13.65□□□□□ -0.22
CCHCR1-227ENST00000508852 IQCB1Q15051 598 aa13.65□□□□□ -0.22
CCHCR1-227ENST00000508852 MARC1Q5VT66 337 aa13.65□□□□□ -0.22
CCHCR1-227ENST00000508852 CYP4V2Q6ZWL3 525 aaPredicted RBP13.65□□□□□ -0.22
CCHCR1-227ENST00000508852 RD3Q7Z3Z2 195 aa13.65□□□□□ -0.22
CCHCR1-227ENST00000508852 POLNQ7Z5Q5 900 aa13.65□□□□□ -0.22
CCHCR1-227ENST00000508852 ATPAF2Q8N5M1 289 aa13.65□□□□□ -0.22
CCHCR1-227ENST00000508852 NETO2Q8NC67 525 aa13.65□□□□□ -0.22
CCHCR1-227ENST00000508852 KIAA1524Q8TCG1 905 aa13.65□□□□□ -0.22
CCHCR1-227ENST00000508852 TSACCQ96A04 125 aaPredicted RBP13.65□□□□□ -0.22
CCHCR1-227ENST00000508852 WBP1Q96G27 269 aa13.65□□□□□ -0.22
CCHCR1-227ENST00000508852 LIN37Q96GY3 246 aaPredicted RBP13.65□□□□□ -0.22
CCHCR1-227ENST00000508852 TMEM74Q96NL1 305 aa13.65□□□□□ -0.22
CCHCR1-227ENST00000508852 NAP1L5Q96NT1 182 aaPredicted RBP13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms