RNA–Protein interactions for RNA: ENST00000508531.1

PDLIM5-211, Transcript of PDZ and LIM domain 5, humanhuman

TSL 4

Gene PDLIM5, Length 480 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-211ENST00000508531 UBXN1Q04323 297 aa4.7□□□□□ -1.66
PDLIM5-211ENST00000508531 ASPHQ12797 758 aa4.7□□□□□ -1.66
PDLIM5-211ENST00000508531 CYP1B1Q16678 543 aa4.7□□□□□ -1.66
PDLIM5-211ENST00000508531 MCMDC2Q4G0Z9 681 aa4.7□□□□□ -1.66
PDLIM5-211ENST00000508531 BRDTQ58F21 947 aaPredicted RBP4.7□□□□□ -1.66
PDLIM5-211ENST00000508531 FAM133BQ5BKY9 247 aaKnown RBP4.7□□□□□ -1.66
PDLIM5-211ENST00000508531 TCP11X2Q5H9J9 407 aa4.7□□□□□ -1.66
PDLIM5-211ENST00000508531 RNF220Q5VTB9 566 aa4.7□□□□□ -1.66
PDLIM5-211ENST00000508531 RWDD4Q6NW29 188 aaKnown RBP4.7□□□□□ -1.66
PDLIM5-211ENST00000508531 TMEM53Q6P2H8 277 aa4.7□□□□□ -1.66
PDLIM5-211ENST00000508531 FRA10AC1Q70Z53 315 aa4.7□□□□□ -1.66
PDLIM5-211ENST00000508531 GET4Q7L5D6 327 aaPredicted RBP4.7□□□□□ -1.66
PDLIM5-211ENST00000508531 APTXQ7Z2E3 356 aaKnown RBP4.7□□□□□ -1.66
PDLIM5-211ENST00000508531 EXOC3L1Q86VI1 746 aa4.7□□□□□ -1.66
PDLIM5-211ENST00000508531 CAND1Q86VP6 1230 aaKnown RBP4.7□□□□□ -1.66
PDLIM5-211ENST00000508531 VSIG1Q86XK7 387 aa4.7□□□□□ -1.66
PDLIM5-211ENST00000508531 SYCE1Q8N0S2 351 aa4.7□□□□□ -1.66
PDLIM5-211ENST00000508531 ABRAQ8N0Z2 381 aa4.7□□□□□ -1.66
PDLIM5-211ENST00000508531 ALLCQ8N6M5 410 aa4.7□□□□□ -1.66
PDLIM5-211ENST00000508531 NANOGP1Q8N7R0 232 aa4.7□□□□□ -1.66
PDLIM5-211ENST00000508531 TBC1D16Q8TBP0 767 aa4.7□□□□□ -1.66
PDLIM5-211ENST00000508531 FNDC8Q8TC99 324 aa4.7□□□□□ -1.66
PDLIM5-211ENST00000508531 NAT14Q8WUY8 206 aa4.7□□□□□ -1.66
PDLIM5-211ENST00000508531 UBLCP1Q8WVY7 318 aaPredicted RBP4.7□□□□□ -1.66
PDLIM5-211ENST00000508531 HPS3Q969F9 1004 aa4.7□□□□□ -1.66
PDLIM5-211ENST00000508531 SGF29Q96ES7 293 aa4.7□□□□□ -1.66
PDLIM5-211ENST00000508531 ZC3H10Q96K80 434 aaKnown RBP4.7□□□□□ -1.66
PDLIM5-211ENST00000508531 P2RX7Q99572 595 aaKnown RBP4.7□□□□□ -1.66
PDLIM5-211ENST00000508531 DPH5Q9H2P9 285 aa4.7□□□□□ -1.66
PDLIM5-211ENST00000508531 TLE6Q9H808 572 aa4.7□□□□□ -1.66
PDLIM5-211ENST00000508531 C10orf88Q9H8K7 445 aa4.7□□□□□ -1.66
PDLIM5-211ENST00000508531 IL1RAPL2Q9NP60 686 aa4.7□□□□□ -1.66
PDLIM5-211ENST00000508531 PIH1D3Q9NQM4 214 aaKnown RBP4.7□□□□□ -1.66
PDLIM5-211ENST00000508531 CNNM1Q9NRU3 951 aa4.7□□□□□ -1.66
PDLIM5-211ENST00000508531 TBC1D23Q9NUY8 699 aa4.7□□□□□ -1.66
PDLIM5-211ENST00000508531 RHBDL2Q9NX52 303 aa4.7□□□□□ -1.66
PDLIM5-211ENST00000508531 GIN1Q9NXP7 522 aa4.7□□□□□ -1.66
PDLIM5-211ENST00000508531 EURLQ9NYK6 297 aa4.7□□□□□ -1.66
PDLIM5-211ENST00000508531 IL20Q9NYY1 176 aa4.7□□□□□ -1.66
PDLIM5-211ENST00000508531 STX18Q9P2W9 335 aaKnown RBP4.7□□□□□ -1.66
PDLIM5-211ENST00000508531 SEC63Q9UGP8 760 aaKnown RBP4.7□□□□□ -1.66
PDLIM5-211ENST00000508531 LNPEPQ9UIQ6 1025 aa4.7□□□□□ -1.66
PDLIM5-211ENST00000508531 MTUS1Q9ULD2 1270 aa4.7□□□□□ -1.66
PDLIM5-211ENST00000508531 FAF1Q9UNN5 650 aaPredicted RBP4.7□□□□□ -1.66
PDLIM5-211ENST00000508531 CHMP2BQ9UQN3 213 aa4.7□□□□□ -1.66
PDLIM5-211ENST00000508531 STK38LQ9Y2H1 464 aa4.7□□□□□ -1.66
PDLIM5-211ENST00000508531 MED16Q9Y2X0 877 aa4.7□□□□□ -1.66
PDLIM5-211ENST00000508531 RABGAP1Q9Y3P9 1069 aa4.7□□□□□ -1.66
PDLIM5-211ENST00000508531 AFG3L2Q9Y4W6 797 aa4.7□□□□□ -1.66
PDLIM5-211ENST00000508531 PCDHB2Q9Y5E7 798 aa4.7□□□□□ -1.66
PDLIM5-211ENST00000508531 COL4A3BPQ9Y5P4 624 aa4.7□□□□□ -1.66
PDLIM5-211ENST00000508531 CLIC4Q9Y696 253 aa4.7□□□□□ -1.66
PDLIM5-211ENST00000508531 EDC4Q6P2E9 1401 aaKnown RBP4.7□□□□□ -1.66
PDLIM5-211ENST00000508531 MAP3K19Q56UN5 1328 aa4.7□□□□□ -1.66
PDLIM5-211ENST00000508531 UMODL1Q5DID0 1318 aa4.7□□□□□ -1.66
PDLIM5-211ENST00000508531 PCDH11XQ9BZA7 1347 aa4.7□□□□□ -1.66
PDLIM5-211ENST00000508531 PCDH11YQ9BZA8 1340 aa4.7□□□□□ -1.66
PDLIM5-211ENST00000508531 SPEF2Q9C093 1822 aa4.69□□□□□ -1.66
PDLIM5-211ENST00000508531 LTBP1Q14766 1721 aa4.69□□□□□ -1.66
PDLIM5-211ENST00000508531 CUL9Q8IWT3 2517 aa4.69□□□□□ -1.66
PDLIM5-211ENST00000508531 RGPD2P0DJD1 1756 aa4.69□□□□□ -1.66
PDLIM5-211ENST00000508531 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP4.69□□□□□ -1.66
PDLIM5-211ENST00000508531 A0A0J9YVX5 310 aa4.69□□□□□ -1.66
PDLIM5-211ENST00000508531 SH3PXD2BA1X283 911 aa4.69□□□□□ -1.66
PDLIM5-211ENST00000508531 BTNL10A8MVZ5 291 aa4.69□□□□□ -1.66
PDLIM5-211ENST00000508531 KCNJ18B7U540 433 aa4.69□□□□□ -1.66
PDLIM5-211ENST00000508531 E9PBE3 544 aa4.69□□□□□ -1.66
PDLIM5-211ENST00000508531 H0YGN5 161 aa4.69□□□□□ -1.66
PDLIM5-211ENST00000508531 PGRMC1O00264 195 aaKnown RBP4.69□□□□□ -1.66
PDLIM5-211ENST00000508531 SH2B2O14492 632 aaPredicted RBP4.69□□□□□ -1.66
PDLIM5-211ENST00000508531 PSMA7O14818 248 aa4.69□□□□□ -1.66
PDLIM5-211ENST00000508531 HNRNPRO43390 633 aaKnown RBP4.69□□□□□ -1.66
PDLIM5-211ENST00000508531 AP1G1O43747 822 aa4.69□□□□□ -1.66
PDLIM5-211ENST00000508531 CCDC22O60826 627 aa4.69□□□□□ -1.66
PDLIM5-211ENST00000508531 ATP9AO75110 1047 aa4.69□□□□□ -1.66
PDLIM5-211ENST00000508531 PEX11AO75192 247 aa4.69□□□□□ -1.66
PDLIM5-211ENST00000508531 FKBP6O75344 327 aa4.69□□□□□ -1.66
PDLIM5-211ENST00000508531 SUPT3HO75486 399 aa4.69□□□□□ -1.66
PDLIM5-211ENST00000508531 CSDE1O75534 798 aaKnown RBP4.69□□□□□ -1.66
PDLIM5-211ENST00000508531 GFPT2O94808 682 aa4.69□□□□□ -1.66
PDLIM5-211ENST00000508531 KRT6AP02538 564 aa4.69□□□□□ -1.66
PDLIM5-211ENST00000508531 KRT6BP04259 564 aa4.69□□□□□ -1.66
PDLIM5-211ENST00000508531 SERPINB2P05120 415 aa4.69□□□□□ -1.66
PDLIM5-211ENST00000508531 PRKCBP05771 671 aa4.69□□□□□ -1.66
PDLIM5-211ENST00000508531 LYNP07948 512 aa4.69□□□□□ -1.66
PDLIM5-211ENST00000508531 CHRM5P08912 532 aaPredicted RBP4.69□□□□□ -1.66
PDLIM5-211ENST00000508531 PDGFRBP09619 1106 aa4.69□□□□□ -1.66
PDLIM5-211ENST00000508531 MYBP10242 640 aa4.69□□□□□ -1.66
PDLIM5-211ENST00000508531 CHN1P15882 459 aa4.69□□□□□ -1.66
PDLIM5-211ENST00000508531 PTPN2P17706 415 aa4.69□□□□□ -1.66
PDLIM5-211ENST00000508531 ATP5F1P24539 256 aaPredicted RBP4.69□□□□□ -1.66
PDLIM5-211ENST00000508531 PTPN4P29074 926 aa4.69□□□□□ -1.66
PDLIM5-211ENST00000508531 PDIA3P30101 505 aaKnown RBP4.69□□□□□ -1.66
PDLIM5-211ENST00000508531 PPARGP37231 505 aaPredicted RBP4.69□□□□□ -1.66
PDLIM5-211ENST00000508531 CRKLP46109 303 aaKnown RBP4.69□□□□□ -1.66
PDLIM5-211ENST00000508531 RPL5P46777 297 aaKnown RBP4.69□□□□□ -1.66
PDLIM5-211ENST00000508531 KRT6CP48668 564 aa4.69□□□□□ -1.66
PDLIM5-211ENST00000508531 RCAN1P53805 252 aa4.69□□□□□ -1.66
PDLIM5-211ENST00000508531 POLGP54098 1239 aaPredicted RBP4.69□□□□□ -1.66
PDLIM5-211ENST00000508531 DRG2P55039 364 aaKnown RBP4.69□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms