RNA–Protein interactions for RNA: ENST00000508235.1

RNF4-210, Transcript of ring finger protein 4, humanhuman

TSL 3

Gene RNF4, Length 603 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-210ENST00000508235 IFT43Q96FT9 208 aa15.07■□□□□ 0
RNF4-210ENST00000508235 PBKQ96KB5 322 aa15.07■□□□□ 0
RNF4-210ENST00000508235 FCRL5Q96RD9 977 aa15.07■□□□□ 0
RNF4-210ENST00000508235 MCCC1Q96RQ3 725 aaPredicted RBP15.07■□□□□ 0
RNF4-210ENST00000508235 RBM15Q96T37 977 aaKnown RBP eCLIP15.07■□□□□ 03e-6■■■■□ 20.8
RNF4-210ENST00000508235 FAM118BQ9BPY3 351 aa15.07■□□□□ 0
RNF4-210ENST00000508235 GTPBP2Q9BX10 602 aaKnown RBP15.07■□□□□ 0
RNF4-210ENST00000508235 FAM153AQ9UHL3 310 aa15.07■□□□□ 0
RNF4-210ENST00000508235 ANKRD6Q9Y2G4 727 aa15.07■□□□□ 0
RNF4-210ENST00000508235 HS3ST3A1Q9Y663 406 aa15.07■□□□□ 0
RNF4-210ENST00000508235 GPR179Q6PRD1 2367 aa15.07■□□□□ 0
RNF4-210ENST00000508235 LOC105378220A0A1B0GUY1 285 aaPredicted RBP15.06■□□□□ 0
RNF4-210ENST00000508235 A0A1B0GVT2 93 aa15.06■□□□□ 0
RNF4-210ENST00000508235 A0A1W2PR77 199 aa15.06■□□□□ 0
RNF4-210ENST00000508235 A6NNZ2 444 aa15.06■□□□□ 0
RNF4-210ENST00000508235 PSMD11O00231 422 aa15.06■□□□□ 0
RNF4-210ENST00000508235 TOR1BO14657 336 aa15.06■□□□□ 0
RNF4-210ENST00000508235 ENC1O14682 589 aa15.06■□□□□ 0
RNF4-210ENST00000508235 CEP104O60308 925 aa15.06■□□□□ 0
RNF4-210ENST00000508235 ANXA9O76027 345 aa15.06■□□□□ 0
RNF4-210ENST00000508235 PRKCGP05129 697 aa15.06■□□□□ 0
RNF4-210ENST00000508235 PDHA1P08559 390 aa15.06■□□□□ 0
RNF4-210ENST00000508235 C6P13671 934 aa15.06■□□□□ 0
RNF4-210ENST00000508235 ZNF30P17039 623 aa15.06■□□□□ 0
RNF4-210ENST00000508235 ITIH2P19823 946 aa15.06■□□□□ 0
RNF4-210ENST00000508235 NFKB1P19838 968 aa15.06■□□□□ 0
RNF4-210ENST00000508235 STIP1P31948 543 aaKnown RBP15.06■□□□□ 0
RNF4-210ENST00000508235 RALGDSQ12967 914 aa15.06■□□□□ 0
RNF4-210ENST00000508235 GRIK2Q13002 908 aa15.06■□□□□ 0
RNF4-210ENST00000508235 FGL2Q14314 439 aa15.06■□□□□ 0
RNF4-210ENST00000508235 PRPSAP1Q14558 356 aa15.06■□□□□ 0
RNF4-210ENST00000508235 AGERQ15109 404 aa15.06■□□□□ 0
RNF4-210ENST00000508235 LIPIQ6XZB0 460 aa15.06■□□□□ 0
RNF4-210ENST00000508235 DCP2Q8IU60 420 aaKnown RBP15.06■□□□□ 0
RNF4-210ENST00000508235 SLC35F6Q8N357 371 aa15.06■□□□□ 0
RNF4-210ENST00000508235 LPCAT1Q8NF37 534 aa15.06■□□□□ 0
RNF4-210ENST00000508235 TADA1Q96BN2 335 aa15.06■□□□□ 0
RNF4-210ENST00000508235 LRRC45Q96CN5 670 aa15.06■□□□□ 0
RNF4-210ENST00000508235 KLHDC7BQ96G42 594 aa15.06■□□□□ 0
RNF4-210ENST00000508235 SPATA13Q96N96 652 aa15.06■□□□□ 0
RNF4-210ENST00000508235 SRPK1Q96SB4 655 aaKnown RBP15.06■□□□□ 0
RNF4-210ENST00000508235 NAP1L3Q99457 506 aaPredicted RBP15.06■□□□□ 0
RNF4-210ENST00000508235 GBA3Q9H227 469 aa15.06■□□□□ 0
RNF4-210ENST00000508235 TMEM9BQ9NQ34 198 aa15.06■□□□□ 0
RNF4-210ENST00000508235 HOMER3Q9NSC5 361 aa15.06■□□□□ 0
RNF4-210ENST00000508235 B4GALT6Q9UBX8 382 aa15.06■□□□□ 0
RNF4-210ENST00000508235 CDV3Q9UKY7 258 aaKnown RBP15.06■□□□□ 0
RNF4-210ENST00000508235 PYCARDQ9ULZ3 195 aa15.06■□□□□ 0
RNF4-210ENST00000508235 SLCO1B1Q9Y6L6 691 aa15.06■□□□□ 0
RNF4-210ENST00000508235 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP15.06■□□□□ 0
RNF4-210ENST00000508235 VPS13AQ96RL7 3174 aa15.06■□□□□ 0
RNF4-210ENST00000508235 A0A0J9YYE9 177 aa15.05■□□□□ -0
RNF4-210ENST00000508235 TCRBV7S2A1N4TA0A589 114 aa15.05■□□□□ -0
RNF4-210ENST00000508235 C5orf60A6NFR6 353 aa15.05■□□□□ -0
RNF4-210ENST00000508235 CAPN8A6NHC0 703 aa15.05■□□□□ -0
RNF4-210ENST00000508235 TLR4O00206 839 aa15.05■□□□□ -0
RNF4-210ENST00000508235 LIASO43766 372 aa15.05■□□□□ -0
RNF4-210ENST00000508235 PRLP01236 227 aa15.05■□□□□ -0
RNF4-210ENST00000508235 EPOP01588 193 aa15.05■□□□□ -0
RNF4-210ENST00000508235 TRBC1P01850 177 aa15.05■□□□□ -0
RNF4-210ENST00000508235 FGGP02679 453 aa15.05■□□□□ -0
RNF4-210ENST00000508235 CXCR5P32302 372 aa15.05■□□□□ -0
RNF4-210ENST00000508235 CD68P34810 354 aaPredicted RBP15.05■□□□□ -0
RNF4-210ENST00000508235 ACTN2P35609 894 aa15.05■□□□□ -0
RNF4-210ENST00000508235 GEMP55040 296 aa15.05■□□□□ -0
RNF4-210ENST00000508235 CDK18Q07002 472 aa15.05■□□□□ -0
RNF4-210ENST00000508235 MPP3Q13368 585 aa15.05■□□□□ -0
RNF4-210ENST00000508235 IHHQ14623 411 aa15.05■□□□□ -0
RNF4-210ENST00000508235 LRRC14Q15048 493 aa15.05■□□□□ -0
RNF4-210ENST00000508235 PCSK7Q16549 785 aa15.05■□□□□ -0
RNF4-210ENST00000508235 CCNG2Q16589 344 aa15.05■□□□□ -0
RNF4-210ENST00000508235 LONRF2Q1L5Z9 754 aa15.05■□□□□ -0
RNF4-210ENST00000508235 ANKRD20A2Q5SQ80 823 aa15.05■□□□□ -0
RNF4-210ENST00000508235 ANKRD20A1Q5TYW2 823 aa15.05■□□□□ -0
RNF4-210ENST00000508235 ANKRD20A3Q5VUR7 823 aa15.05■□□□□ -0
RNF4-210ENST00000508235 KYAT3Q6YP21 454 aaKnown RBP15.05■□□□□ -0
RNF4-210ENST00000508235 ABI3BPQ7Z7G0 1075 aa15.05■□□□□ -0
RNF4-210ENST00000508235 RAVER1Q8IY67 606 aaKnown RBP15.05■□□□□ -0
RNF4-210ENST00000508235 OXR1Q8N573 874 aa15.05■□□□□ -0
RNF4-210ENST00000508235 MINDY1Q8N5J2 469 aa15.05■□□□□ -0
RNF4-210ENST00000508235 CENPTQ96BT3 561 aa15.05■□□□□ -0
RNF4-210ENST00000508235 RMDN1Q96DB5 314 aa15.05■□□□□ -0
RNF4-210ENST00000508235 KLF6Q99612 283 aaPredicted RBP15.05■□□□□ -0
RNF4-210ENST00000508235 MYOCQ99972 504 aa15.05■□□□□ -0
RNF4-210ENST00000508235 MLPHQ9BV36 600 aaPredicted RBP15.05■□□□□ -0
RNF4-210ENST00000508235 C10orf88Q9H8K7 445 aa15.05■□□□□ -0
RNF4-210ENST00000508235 USP29Q9HBJ7 922 aa15.05■□□□□ -0
RNF4-210ENST00000508235 R3HDM2Q9Y2K5 976 aaKnown RBP15.05■□□□□ -0
RNF4-210ENST00000508235 AAR2Q9Y312 384 aaKnown RBP15.05■□□□□ -0
RNF4-210ENST00000508235 ZFHX2Q9C0A1 2572 aaPredicted RBP15.04■□□□□ -0
RNF4-210ENST00000508235 CACNA1EQ15878 2313 aa15.04■□□□□ -0
RNF4-210ENST00000508235 GOLGA6CA6NDK9 693 aa15.04■□□□□ -0
RNF4-210ENST00000508235 GOLGA6BA6NDN3 693 aa15.04■□□□□ -0
RNF4-210ENST00000508235 NPIPB15A6NHN6 443 aaPredicted RBP15.04■□□□□ -0
RNF4-210ENST00000508235 USP27XA6NNY8 438 aa15.04■□□□□ -0
RNF4-210ENST00000508235 ANKRD66B4E2M5 251 aa15.04■□□□□ -0
RNF4-210ENST00000508235 WNT9AO14904 365 aa15.04■□□□□ -0
RNF4-210ENST00000508235 PMPCBO75439 489 aa15.04■□□□□ -0
RNF4-210ENST00000508235 HEXIM1O94992 359 aaKnown RBP15.04■□□□□ -0
RNF4-210ENST00000508235 MT-CYBP00156 380 aaPredicted RBP15.04■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms