RNA–Protein interactions for RNA: ENST00000508216.5

PDLIM5-210, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2 BASIC

Gene PDLIM5, Length 1,794 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-210ENST00000508216 GMCL1Q96IK5 515 aa10.87□□□□□ -0.67
PDLIM5-210ENST00000508216 FSD1Q9BTV5 496 aa10.87□□□□□ -0.67
PDLIM5-210ENST00000508216 RACGAP1Q9H0H5 632 aa10.87□□□□□ -0.67
PDLIM5-210ENST00000508216 COPG1Q9Y678 874 aaKnown RBP10.87□□□□□ -0.67
PDLIM5-210ENST00000508216 COL22A1Q8NFW1 1626 aaPredicted RBP10.87□□□□□ -0.67
PDLIM5-210ENST00000508216 NID2Q14112 1375 aa10.86□□□□□ -0.67
PDLIM5-210ENST00000508216 PALLDQ8WX93 1383 aa10.86□□□□□ -0.67
PDLIM5-210ENST00000508216 A6NCN8 305 aa10.86□□□□□ -0.67
PDLIM5-210ENST00000508216 PRR23AA6NEV1 266 aa10.86□□□□□ -0.67
PDLIM5-210ENST00000508216 TUBAL3A6NHL2 446 aa10.86□□□□□ -0.67
PDLIM5-210ENST00000508216 CAPN5O15484 640 aaPredicted RBP10.86□□□□□ -0.67
PDLIM5-210ENST00000508216 THAP12O43422 761 aa10.86□□□□□ -0.67
PDLIM5-210ENST00000508216 TLL1O43897 1013 aa10.86□□□□□ -0.67
PDLIM5-210ENST00000508216 KRT19P08727 400 aa10.86□□□□□ -0.67
PDLIM5-210ENST00000508216 H2AFB1P0C5Y9 115 aa10.86□□□□□ -0.67
PDLIM5-210ENST00000508216 H2AFB2P0C5Z0 115 aa10.86□□□□□ -0.67
PDLIM5-210ENST00000508216 MYL4P12829 197 aa10.86□□□□□ -0.67
PDLIM5-210ENST00000508216 SLC2A4P14672 509 aa10.86□□□□□ -0.67
PDLIM5-210ENST00000508216 HK1P19367 917 aa10.86□□□□□ -0.67
PDLIM5-210ENST00000508216 ZP3P21754 424 aa10.86□□□□□ -0.67
PDLIM5-210ENST00000508216 GRM5P41594 1212 aa10.86□□□□□ -0.67
PDLIM5-210ENST00000508216 AFMP43652 599 aa10.86□□□□□ -0.67
PDLIM5-210ENST00000508216 TOB1P50616 345 aaPredicted RBP10.86□□□□□ -0.67
PDLIM5-210ENST00000508216 HLCSP50747 726 aa10.86□□□□□ -0.67
PDLIM5-210ENST00000508216 RAD23AP54725 363 aa10.86□□□□□ -0.67
PDLIM5-210ENST00000508216 TGFB2P61812 414 aa10.86□□□□□ -0.67
PDLIM5-210ENST00000508216 CLCQ05315 142 aa10.86□□□□□ -0.67
PDLIM5-210ENST00000508216 MAPKAPK3Q16644 382 aa10.86□□□□□ -0.67
PDLIM5-210ENST00000508216 EIF2S3LQ2VIR3 472 aaKnown RBP10.86□□□□□ -0.67
PDLIM5-210ENST00000508216 PARP15Q460N3 678 aa10.86□□□□□ -0.67
PDLIM5-210ENST00000508216 FSCBQ5H9T9 825 aa10.86□□□□□ -0.67
PDLIM5-210ENST00000508216 PITRM1Q5JRX3 1037 aa10.86□□□□□ -0.67
PDLIM5-210ENST00000508216 CCNYL2Q5T2Q4 361 aa10.86□□□□□ -0.67
PDLIM5-210ENST00000508216 PYHIN1Q6K0P9 492 aa10.86□□□□□ -0.67
PDLIM5-210ENST00000508216 C3orf33Q6P1S2 294 aa10.86□□□□□ -0.67
PDLIM5-210ENST00000508216 FAM196AQ6ZSG2 479 aa10.86□□□□□ -0.67
PDLIM5-210ENST00000508216 MAPKAPK5Q8IW41 473 aa10.86□□□□□ -0.67
PDLIM5-210ENST00000508216 CTAGE3PQ8IX95 158 aa10.86□□□□□ -0.67
PDLIM5-210ENST00000508216 CCDC105Q8IYK2 499 aa10.86□□□□□ -0.67
PDLIM5-210ENST00000508216 C4orf33Q8N1A6 199 aa10.86□□□□□ -0.67
PDLIM5-210ENST00000508216 SCML4Q8N228 414 aa10.86□□□□□ -0.67
PDLIM5-210ENST00000508216 SVOPQ8N4V2 548 aa10.86□□□□□ -0.67
PDLIM5-210ENST00000508216 SREK1IP1Q8N9Q2 155 aaPredicted RBP10.86□□□□□ -0.67
PDLIM5-210ENST00000508216 TP53I13Q8NBR0 393 aaPredicted RBP10.86□□□□□ -0.67
PDLIM5-210ENST00000508216 SLC37A3Q8NCC5 494 aa10.86□□□□□ -0.67
PDLIM5-210ENST00000508216 ADAM32Q8TC27 787 aa10.86□□□□□ -0.67
PDLIM5-210ENST00000508216 DNAJA4Q8WW22 397 aaPredicted RBP10.86□□□□□ -0.67
PDLIM5-210ENST00000508216 JDP2Q8WYK2 163 aa10.86□□□□□ -0.67
PDLIM5-210ENST00000508216 RFFLQ8WZ73 363 aa10.86□□□□□ -0.67
PDLIM5-210ENST00000508216 TFAP2CQ92754 450 aa10.86□□□□□ -0.67
PDLIM5-210ENST00000508216 ZHX1-C8orf76Q96EF9 292 aa10.86□□□□□ -0.67
PDLIM5-210ENST00000508216 C7orf34Q96L11 122 aa10.86□□□□□ -0.67
PDLIM5-210ENST00000508216 HSFY1Q96LI6 401 aa10.86□□□□□ -0.67
PDLIM5-210ENST00000508216 KLHL15Q96M94 604 aa10.86□□□□□ -0.67
PDLIM5-210ENST00000508216 UHRF1Q96T88 793 aaPredicted RBP10.86□□□□□ -0.67
PDLIM5-210ENST00000508216 TRIM56Q9BRZ2 755 aaKnown RBP10.86□□□□□ -0.67
PDLIM5-210ENST00000508216 KATNAL1Q9BW62 490 aa10.86□□□□□ -0.67
PDLIM5-210ENST00000508216 TRIM31Q9BZY9 425 aa10.86□□□□□ -0.67
PDLIM5-210ENST00000508216 SHARPINQ9H0F6 387 aa10.86□□□□□ -0.67
PDLIM5-210ENST00000508216 CSRNP2Q9H175 543 aa10.86□□□□□ -0.67
PDLIM5-210ENST00000508216 MANSC1Q9H8J5 431 aa10.86□□□□□ -0.67
PDLIM5-210ENST00000508216 GSN-AS1Q9NRJ2 163 aa10.86□□□□□ -0.67
PDLIM5-210ENST00000508216 ZNF275Q9NSD4 429 aaPredicted RBP10.86□□□□□ -0.67
PDLIM5-210ENST00000508216 UFSP2Q9NUQ7 469 aa10.86□□□□□ -0.67
PDLIM5-210ENST00000508216 EPHA6Q9UF33 1036 aa10.86□□□□□ -0.67
PDLIM5-210ENST00000508216 NDUFAF1Q9Y375 327 aa10.86□□□□□ -0.67
PDLIM5-210ENST00000508216 A3GALT2U3KPV4 340 aa10.86□□□□□ -0.67
PDLIM5-210ENST00000508216 LOC100653049A0A140TA62 436 aa10.85□□□□□ -0.67
PDLIM5-210ENST00000508216 C9IYK1 514 aa10.85□□□□□ -0.67
PDLIM5-210ENST00000508216 ANGPT2O15123 496 aa10.85□□□□□ -0.67
PDLIM5-210ENST00000508216 CALUO43852 315 aaPredicted RBP10.85□□□□□ -0.67
PDLIM5-210ENST00000508216 BRINP1O60477 761 aa10.85□□□□□ -0.67
PDLIM5-210ENST00000508216 KRT34O76011 436 aa10.85□□□□□ -0.67
PDLIM5-210ENST00000508216 CCNB2O95067 398 aa10.85□□□□□ -0.67
PDLIM5-210ENST00000508216 CELF2O95319 508 aaKnown RBP10.85□□□□□ -0.67
PDLIM5-210ENST00000508216 DEXIO95424 95 aa10.85□□□□□ -0.67
PDLIM5-210ENST00000508216 BMP4P12644 408 aa10.85□□□□□ -0.67
PDLIM5-210ENST00000508216 TCN1P20061 433 aaPredicted RBP10.85□□□□□ -0.67
PDLIM5-210ENST00000508216 ACTR2P61160 394 aa10.85□□□□□ -0.67
PDLIM5-210ENST00000508216 PPP2R5DQ14738 602 aa10.85□□□□□ -0.67
PDLIM5-210ENST00000508216 SLC1A5Q15758 541 aa10.85□□□□□ -0.67
PDLIM5-210ENST00000508216 AANATQ16613 207 aa10.85□□□□□ -0.67
PDLIM5-210ENST00000508216 GPATCH4Q5T3I0 446 aaKnown RBP10.85□□□□□ -0.67
PDLIM5-210ENST00000508216 DESI1Q6ICB0 168 aa10.85□□□□□ -0.67
PDLIM5-210ENST00000508216 PODNQ7Z5L7 613 aa10.85□□□□□ -0.67
PDLIM5-210ENST00000508216 LINC00523Q86TU6 105 aa10.85□□□□□ -0.67
PDLIM5-210ENST00000508216 RNF113BQ8IZP6 322 aaKnown RBP10.85□□□□□ -0.67
PDLIM5-210ENST00000508216 ZNF366Q8N895 744 aa10.85□□□□□ -0.67
PDLIM5-210ENST00000508216 PPHLN1Q8NEY8 458 aaKnown RBP10.85□□□□□ -0.67
PDLIM5-210ENST00000508216 LPCAT1Q8NF37 534 aa10.85□□□□□ -0.67
PDLIM5-210ENST00000508216 MAGEE2Q8TD90 523 aaPredicted RBP10.85□□□□□ -0.67
PDLIM5-210ENST00000508216 COL26A1Q96A83 441 aa10.85□□□□□ -0.67
PDLIM5-210ENST00000508216 CNOT6LQ96LI5 555 aaKnown RBP10.85□□□□□ -0.67
PDLIM5-210ENST00000508216 GAS2L1Q99501 681 aaPredicted RBP10.85□□□□□ -0.67
PDLIM5-210ENST00000508216 LSM14BQ9BX40 385 aaKnown RBP10.85□□□□□ -0.67
PDLIM5-210ENST00000508216 MVB12BQ9H7P6 319 aa10.85□□□□□ -0.67
PDLIM5-210ENST00000508216 COG4Q9H9E3 785 aa10.85□□□□□ -0.67
PDLIM5-210ENST00000508216 POLR1BQ9H9Y6 1135 aa10.85□□□□□ -0.67
PDLIM5-210ENST00000508216 BRD7Q9NPI1 651 aa10.85□□□□□ -0.67
PDLIM5-210ENST00000508216 PLSCR3Q9NRY6 295 aa10.85□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms