RNA–Protein interactions for RNA: ENST00000508017.5

SNCAIP-209, Transcript of synuclein alpha interacting protein, humanhuman

TSL 1 (best)

Gene SNCAIP, Length 2,410 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAIP-209ENST00000508017 MYF6P23409 242 aa13.49□□□□□ -0.25
SNCAIP-209ENST00000508017 KCNC1P48547 511 aa13.49□□□□□ -0.25
SNCAIP-209ENST00000508017 POU4F1Q01851 419 aa13.49□□□□□ -0.25
SNCAIP-209ENST00000508017 PPIL2Q13356 520 aa13.49□□□□□ -0.25
SNCAIP-209ENST00000508017 CAPRIN1Q14444 709 aaKnown RBP13.49□□□□□ -0.25
SNCAIP-209ENST00000508017 ARL13BQ3SXY8 428 aa13.49□□□□□ -0.25
SNCAIP-209ENST00000508017 KLHDC8BQ8IXV7 354 aa13.49□□□□□ -0.25
SNCAIP-209ENST00000508017 OFCC1Q8IZS5 231 aa13.49□□□□□ -0.25
SNCAIP-209ENST00000508017 ZMIZ2Q8NF64 920 aa13.49□□□□□ -0.25
SNCAIP-209ENST00000508017 TRPC4APQ8TEL6 797 aa13.49□□□□□ -0.25
SNCAIP-209ENST00000508017 RPL10LQ96L21 214 aaKnown RBP13.49□□□□□ -0.25
SNCAIP-209ENST00000508017 NPLQ9BXD5 320 aaPredicted RBP13.49□□□□□ -0.25
SNCAIP-209ENST00000508017 TREX1Q9NSU2 369 aa13.49□□□□□ -0.25
SNCAIP-209ENST00000508017 CCM2LQ9NUG4 571 aaPredicted RBP13.49□□□□□ -0.25
SNCAIP-209ENST00000508017 ZNHIT2Q9UHR6 403 aa13.49□□□□□ -0.25
SNCAIP-209ENST00000508017 CLEC11AQ9Y240 323 aa13.49□□□□□ -0.25
SNCAIP-209ENST00000508017 AAR2Q9Y312 384 aaKnown RBP13.49□□□□□ -0.25
SNCAIP-209ENST00000508017 CSADQ9Y600 493 aa13.49□□□□□ -0.25
SNCAIP-209ENST00000508017 ZFC3H1O60293 1989 aaKnown RBP13.49□□□□□ -0.25
SNCAIP-209ENST00000508017 DHRS12A0PJE2 317 aa13.48□□□□□ -0.25
SNCAIP-209ENST00000508017 AP3B1O00203 1094 aa13.48□□□□□ -0.25
SNCAIP-209ENST00000508017 GPR32O75388 356 aa13.48□□□□□ -0.25
SNCAIP-209ENST00000508017 ZNF189O75820 626 aaPredicted RBP13.48□□□□□ -0.25
SNCAIP-209ENST00000508017 HSPA8P11142 646 aaKnown RBP13.48□□□□□ -0.25
SNCAIP-209ENST00000508017 CHRM3P20309 590 aa13.48□□□□□ -0.25
SNCAIP-209ENST00000508017 CD247P20963 164 aa13.48□□□□□ -0.25
SNCAIP-209ENST00000508017 GPX3P22352 226 aa13.48□□□□□ -0.25
SNCAIP-209ENST00000508017 POLD2P49005 469 aa13.48□□□□□ -0.25
SNCAIP-209ENST00000508017 PMS2P3Q13401 168 aa13.48□□□□□ -0.25
SNCAIP-209ENST00000508017 HACD2Q6Y1H2 254 aa13.48□□□□□ -0.25
SNCAIP-209ENST00000508017 ANKRD23Q86SG2 305 aa13.48□□□□□ -0.25
SNCAIP-209ENST00000508017 PATL1Q86TB9 770 aaKnown RBP13.48□□□□□ -0.25
SNCAIP-209ENST00000508017 AFAP1L2Q8N4X5 818 aa13.48□□□□□ -0.25
SNCAIP-209ENST00000508017 MFSD2AQ8NA29 543 aa13.48□□□□□ -0.25
SNCAIP-209ENST00000508017 ARRDC4Q8NCT1 418 aa13.48□□□□□ -0.25
SNCAIP-209ENST00000508017 RHOBTB2Q9BYZ6 727 aa13.48□□□□□ -0.25
SNCAIP-209ENST00000508017 NAA50Q9GZZ1 169 aaKnown RBP13.48□□□□□ -0.25
SNCAIP-209ENST00000508017 GLOD4Q9HC38 313 aa13.48□□□□□ -0.25
SNCAIP-209ENST00000508017 PIN4Q9Y237 131 aaKnown RBP13.48□□□□□ -0.25
SNCAIP-209ENST00000508017 ZNF711Q9Y462 761 aa13.48□□□□□ -0.25
SNCAIP-209ENST00000508017 STAMBPO95630 424 aa13.48□□□□□ -0.25
SNCAIP-209ENST00000508017 PNPLA4P41247 253 aa13.48□□□□□ -0.25
SNCAIP-209ENST00000508017 KPNA2P52292 529 aaKnown RBP13.48□□□□□ -0.25
SNCAIP-209ENST00000508017 MERTKQ12866 999 aa13.48□□□□□ -0.25
SNCAIP-209ENST00000508017 KIF19Q2TAC6 998 aa13.48□□□□□ -0.25
SNCAIP-209ENST00000508017 VPS26BQ4G0F5 336 aa13.48□□□□□ -0.25
SNCAIP-209ENST00000508017 GPR107Q5VW38 600 aa13.48□□□□□ -0.25
SNCAIP-209ENST00000508017 NEPROQ6NW34 567 aa13.48□□□□□ -0.25
SNCAIP-209ENST00000508017 BHLHA9Q7RTU4 235 aa13.48□□□□□ -0.25
SNCAIP-209ENST00000508017 LDB1Q86U70 411 aaPredicted RBP13.48□□□□□ -0.25
SNCAIP-209ENST00000508017 FAM35AQ86V20 835 aa13.48□□□□□ -0.25
SNCAIP-209ENST00000508017 CROCCP3Q8IVE0 287 aa13.48□□□□□ -0.25
SNCAIP-209ENST00000508017 CMTR2Q8IYT2 770 aaKnown RBP13.48□□□□□ -0.25
SNCAIP-209ENST00000508017 GIPC3Q8TF64 312 aa13.48□□□□□ -0.25
SNCAIP-209ENST00000508017 CYGBQ8WWM9 190 aa13.48□□□□□ -0.25
SNCAIP-209ENST00000508017 TSGA13Q96PP4 275 aa13.48□□□□□ -0.25
SNCAIP-209ENST00000508017 GPATCH1Q9BRR8 931 aaKnown RBP13.48□□□□□ -0.25
SNCAIP-209ENST00000508017 SIK2Q9H0K1 926 aa13.48□□□□□ -0.25
SNCAIP-209ENST00000508017 SOX17Q9H6I2 414 aaPredicted RBP13.48□□□□□ -0.25
SNCAIP-209ENST00000508017 CXorf21Q9HAI6 301 aa13.48□□□□□ -0.25
SNCAIP-209ENST00000508017 AGPAT4Q9NRZ5 378 aa13.48□□□□□ -0.25
SNCAIP-209ENST00000508017 OAZ3Q9UMX2 235 aa13.48□□□□□ -0.25
SNCAIP-209ENST00000508017 TIMM13Q9Y5L4 95 aaPredicted RBP13.48□□□□□ -0.25
SNCAIP-209ENST00000508017 A0A0J9YYE9 177 aa13.47□□□□□ -0.25
SNCAIP-209ENST00000508017 A0A1W2PPW3 197 aa13.47□□□□□ -0.25
SNCAIP-209ENST00000508017 H3BMQ9 156 aa13.47□□□□□ -0.25
SNCAIP-209ENST00000508017 PPP6CO00743 305 aa13.47□□□□□ -0.25
SNCAIP-209ENST00000508017 PSMD3O43242 534 aa13.47□□□□□ -0.25
SNCAIP-209ENST00000508017 SUPT7LO94864 414 aa13.47□□□□□ -0.25
SNCAIP-209ENST00000508017 LTA4HP09960 611 aaKnown RBP13.47□□□□□ -0.25
SNCAIP-209ENST00000508017 CAPN3P20807 821 aa13.47□□□□□ -0.25
SNCAIP-209ENST00000508017 DNAJB2P25686 324 aa13.47□□□□□ -0.25
SNCAIP-209ENST00000508017 VARSP26640 1264 aaKnown RBP13.47□□□□□ -0.25
SNCAIP-209ENST00000508017 ADRA1AP35348 466 aa13.47□□□□□ -0.25
SNCAIP-209ENST00000508017 SOX11P35716 441 aa13.47□□□□□ -0.25
SNCAIP-209ENST00000508017 CXCR3P49682 368 aa13.47□□□□□ -0.25
SNCAIP-209ENST00000508017 CDH13P55290 713 aa13.47□□□□□ -0.25
SNCAIP-209ENST00000508017 NAA20P61599 178 aa13.47□□□□□ -0.25
SNCAIP-209ENST00000508017 PCSK7Q16549 785 aa13.47□□□□□ -0.25
SNCAIP-209ENST00000508017 INTS11Q5TA45 600 aaKnown RBP13.47□□□□□ -0.25
SNCAIP-209ENST00000508017 AGAP9Q5VTM2 703 aa13.47□□□□□ -0.25
SNCAIP-209ENST00000508017 TMEM207Q6UWW9 146 aa13.47□□□□□ -0.25
SNCAIP-209ENST00000508017 TAC4Q86UU9 113 aa13.47□□□□□ -0.25
SNCAIP-209ENST00000508017 ZBTB46Q86UZ6 589 aa13.47□□□□□ -0.25
SNCAIP-209ENST00000508017 ERO1BQ86YB8 467 aa13.47□□□□□ -0.25
SNCAIP-209ENST00000508017 CAMK1DQ8IU85 385 aa13.47□□□□□ -0.25
SNCAIP-209ENST00000508017 ARHGAP12Q8IWW6 846 aa13.47□□□□□ -0.25
SNCAIP-209ENST00000508017 TMEM40Q8WWA1 233 aa13.47□□□□□ -0.25
SNCAIP-209ENST00000508017 C19orf60Q96EN9 201 aa13.47□□□□□ -0.25
SNCAIP-209ENST00000508017 COG8Q96MW5 612 aa13.47□□□□□ -0.25
SNCAIP-209ENST00000508017 FCRL5Q96RD9 977 aa13.47□□□□□ -0.25
SNCAIP-209ENST00000508017 HIPK3Q9H422 1215 aa13.47□□□□□ -0.25
SNCAIP-209ENST00000508017 ALG9Q9H6U8 611 aa13.47□□□□□ -0.25
SNCAIP-209ENST00000508017 RPF2Q9H7B2 306 aaKnown RBP13.47□□□□□ -0.25
SNCAIP-209ENST00000508017 AKTIPQ9H8T0 292 aa13.47□□□□□ -0.25
SNCAIP-209ENST00000508017 TUBA8Q9NY65 449 aaPredicted RBP13.47□□□□□ -0.25
SNCAIP-209ENST00000508017 DSEQ9UL01 958 aa13.47□□□□□ -0.25
SNCAIP-209ENST00000508017 NYNRINQ9P2P1 1898 aaKnown RBP13.47□□□□□ -0.25
SNCAIP-209ENST00000508017 RNF103-CHMP3A0A140T963 221 aa13.47□□□□□ -0.25
SNCAIP-209ENST00000508017 MYBPHLA2RUH7 354 aa13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms