RNA–Protein interactions for RNA: ENST00000507678.5

SPCS3-203, Transcript of signal peptidase complex subunit 3, humanhuman

TSL 2

Gene SPCS3, Length 2,655 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPCS3-203ENST00000507678 NPAS2Q99743 824 aa22.13■■□□□ 1.13
SPCS3-203ENST00000507678 ARNT2Q9HBZ2 717 aa22.13■■□□□ 1.13
SPCS3-203ENST00000507678 VPS45Q9NRW7 570 aa22.13■■□□□ 1.13
SPCS3-203ENST00000507678 ADAMTS6Q9UKP5 1117 aa22.13■■□□□ 1.13
SPCS3-203ENST00000507678 COPG1Q9Y678 874 aaKnown RBP22.13■■□□□ 1.13
SPCS3-203ENST00000507678 A0A1W2PQ45 241 aaPredicted RBP22.12■■□□□ 1.13
SPCS3-203ENST00000507678 A0A1W2PQY0 241 aa22.12■■□□□ 1.13
SPCS3-203ENST00000507678 SCAMP3O14828 347 aaKnown RBP22.12■■□□□ 1.13
SPCS3-203ENST00000507678 SYN3O14994 580 aa22.12■■□□□ 1.13
SPCS3-203ENST00000507678 TRPA1O75762 1119 aa22.12■■□□□ 1.13
SPCS3-203ENST00000507678 ALDH2P05091 517 aa22.12■■□□□ 1.13
SPCS3-203ENST00000507678 RAG1P15918 1043 aa22.12■■□□□ 1.13
SPCS3-203ENST00000507678 LEPRP48357 1165 aaKnown RBP22.12■■□□□ 1.13
SPCS3-203ENST00000507678 SLC11A1P49279 550 aa22.12■■□□□ 1.13
SPCS3-203ENST00000507678 SERINC3Q13530 473 aa22.12■■□□□ 1.13
SPCS3-203ENST00000507678 TMEM207Q6UWW9 146 aa22.12■■□□□ 1.13
SPCS3-203ENST00000507678 OR7D4Q8NG98 312 aa22.12■■□□□ 1.13
SPCS3-203ENST00000507678 DDX50Q9BQ39 737 aaKnown RBP22.12■■□□□ 1.13
SPCS3-203ENST00000507678 ATP13A1Q9HD20 1204 aa22.12■■□□□ 1.13
SPCS3-203ENST00000507678 VTI1BQ9UEU0 232 aa22.12■■□□□ 1.13
SPCS3-203ENST00000507678 TMEM189-UBE2V1I3L0A0 370 aa22.12■■□□□ 1.13
SPCS3-203ENST00000507678 PRKAA2P54646 552 aa22.12■■□□□ 1.13
SPCS3-203ENST00000507678 NSUN2Q08J23 767 aaKnown RBP eCLIP22.12■■□□□ 1.13
SPCS3-203ENST00000507678 DHDDSQ86SQ9 333 aa22.12■■□□□ 1.13
SPCS3-203ENST00000507678 KYQ8NBH2 561 aa22.12■■□□□ 1.13
SPCS3-203ENST00000507678 CD99L2Q8TCZ2 262 aa22.12■■□□□ 1.13
SPCS3-203ENST00000507678 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP22.12■■□□□ 1.13
SPCS3-203ENST00000507678 ATP6AP2A0A1C7CYW4 349 aa22.11■■□□□ 1.13
SPCS3-203ENST00000507678 ATP6AP2O75787 350 aa22.11■■□□□ 1.13
SPCS3-203ENST00000507678 ATXN1LP0C7T5 689 aaKnown RBP22.11■■□□□ 1.13
SPCS3-203ENST00000507678 KCNC1P48547 511 aa22.11■■□□□ 1.13
SPCS3-203ENST00000507678 CLCN5P51795 746 aa22.11■■□□□ 1.13
SPCS3-203ENST00000507678 KPNA2P52292 529 aaKnown RBP22.11■■□□□ 1.13
SPCS3-203ENST00000507678 FAM189BP81408 668 aa22.11■■□□□ 1.13
SPCS3-203ENST00000507678 CDC16Q13042 620 aa22.11■■□□□ 1.13
SPCS3-203ENST00000507678 MSLNQ13421 630 aaPredicted RBP22.11■■□□□ 1.13
SPCS3-203ENST00000507678 PPP1R3AQ16821 1122 aa22.11■■□□□ 1.13
SPCS3-203ENST00000507678 CLEC6AQ6EIG7 209 aa22.11■■□□□ 1.13
SPCS3-203ENST00000507678 KIAA0408Q6ZU52 694 aa22.11■■□□□ 1.13
SPCS3-203ENST00000507678 PIWIL4Q7Z3Z4 852 aaKnown RBP22.11■■□□□ 1.13
SPCS3-203ENST00000507678 RAET1EQ8TD07 263 aa22.11■■□□□ 1.13
SPCS3-203ENST00000507678 SMIM14Q96QK8 99 aa22.11■■□□□ 1.13
SPCS3-203ENST00000507678 SQORQ9Y6N5 450 aa22.11■■□□□ 1.13
SPCS3-203ENST00000507678 DOCK4Q8N1I0 1966 aa22.11■■□□□ 1.13
SPCS3-203ENST00000507678 IGLV3-10A0A075B6K4 115 aa22.11■■□□□ 1.13
SPCS3-203ENST00000507678 LDB2O43679 373 aa22.11■■□□□ 1.13
SPCS3-203ENST00000507678 IPO13O94829 963 aaKnown RBP22.11■■□□□ 1.13
SPCS3-203ENST00000507678 VNN2O95498 520 aa22.11■■□□□ 1.13
SPCS3-203ENST00000507678 GOT2P00505 430 aaKnown RBP22.11■■□□□ 1.13
SPCS3-203ENST00000507678 MTTPP55157 894 aa22.11■■□□□ 1.13
SPCS3-203ENST00000507678 SULT2A1Q06520 285 aa22.11■■□□□ 1.13
SPCS3-203ENST00000507678 ART3Q13508 389 aa22.11■■□□□ 1.13
SPCS3-203ENST00000507678 FUT10Q6P4F1 479 aa22.11■■□□□ 1.13
SPCS3-203ENST00000507678 GK5Q6ZS86 529 aa22.11■■□□□ 1.13
SPCS3-203ENST00000507678 LRRC8DQ7L1W4 858 aa22.11■■□□□ 1.13
SPCS3-203ENST00000507678 LCA5Q86VQ0 697 aa22.11■■□□□ 1.13
SPCS3-203ENST00000507678 ECSITQ9BQ95 431 aa22.11■■□□□ 1.13
SPCS3-203ENST00000507678 POLR1EQ9GZS1 481 aaKnown RBP22.11■■□□□ 1.13
SPCS3-203ENST00000507678 TMEM161AQ9NX61 479 aa22.11■■□□□ 1.13
SPCS3-203ENST00000507678 LRFN2Q9ULH4 789 aa22.11■■□□□ 1.13
SPCS3-203ENST00000507678 SUPT7LO94864 414 aa22.1■■□□□ 1.13
SPCS3-203ENST00000507678 S1PR4O95977 384 aa22.1■■□□□ 1.13
SPCS3-203ENST00000507678 TACR2P21452 398 aa22.1■■□□□ 1.13
SPCS3-203ENST00000507678 PEX2P28328 305 aa22.1■■□□□ 1.13
SPCS3-203ENST00000507678 PRDX6P30041 224 aa22.1■■□□□ 1.13
SPCS3-203ENST00000507678 POLD2P49005 469 aa22.1■■□□□ 1.13
SPCS3-203ENST00000507678 THOP1P52888 689 aa22.1■■□□□ 1.13
SPCS3-203ENST00000507678 FAM156AQ8NDB6 213 aa22.1■■□□□ 1.13
SPCS3-203ENST00000507678 MARCH5Q9NX47 278 aa22.1■■□□□ 1.13
SPCS3-203ENST00000507678 SDHDO14521 159 aa22.1■■□□□ 1.13
SPCS3-203ENST00000507678 NBNO60934 754 aa22.1■■□□□ 1.13
SPCS3-203ENST00000507678 MAGEA11P43364 429 aa22.1■■□□□ 1.13
SPCS3-203ENST00000507678 CDH13P55290 713 aa22.1■■□□□ 1.13
SPCS3-203ENST00000507678 C1QTNF8P60827 252 aa22.1■■□□□ 1.13
SPCS3-203ENST00000507678 RPS24P62847 133 aaKnown RBP22.1■■□□□ 1.13
SPCS3-203ENST00000507678 MRPS35P82673 323 aaKnown RBP22.1■■□□□ 1.13
SPCS3-203ENST00000507678 BTKQ06187 659 aa22.1■■□□□ 1.13
SPCS3-203ENST00000507678 IL10RBQ08334 325 aa22.1■■□□□ 1.13
SPCS3-203ENST00000507678 FBXO48Q5FWF7 155 aa22.1■■□□□ 1.13
SPCS3-203ENST00000507678 EZH1Q92800 747 aaPredicted RBP22.1■■□□□ 1.13
SPCS3-203ENST00000507678 F5H5T6 163 aa22.09■■□□□ 1.13
SPCS3-203ENST00000507678 SLCO1B7G3V0H7 640 aa22.09■■□□□ 1.13
SPCS3-203ENST00000507678 ADAM12O43184 909 aa22.09■■□□□ 1.13
SPCS3-203ENST00000507678 ZCCHC18P0CG32 403 aa22.09■■□□□ 1.13
SPCS3-203ENST00000507678 SLC6A4P31645 630 aa22.09■■□□□ 1.13
SPCS3-203ENST00000507678 TRIP10Q15642 601 aa22.09■■□□□ 1.13
SPCS3-203ENST00000507678 CUZD1Q86UP6 607 aa22.09■■□□□ 1.13
SPCS3-203ENST00000507678 GALNT15Q8N3T1 639 aa22.09■■□□□ 1.13
SPCS3-203ENST00000507678 RP9Q8TA86 221 aaKnown RBP22.09■■□□□ 1.13
SPCS3-203ENST00000507678 OLA1Q9NTK5 396 aaKnown RBP22.09■■□□□ 1.13
SPCS3-203ENST00000507678 UBA6A0AVT1 1052 aaPredicted RBP22.09■■□□□ 1.13
SPCS3-203ENST00000507678 MROH6A6NGR9 719 aa22.09■■□□□ 1.13
SPCS3-203ENST00000507678 ENPP3O14638 875 aa22.09■■□□□ 1.13
SPCS3-203ENST00000507678 NPHS1O60500 1241 aa22.09■■□□□ 1.13
SPCS3-203ENST00000507678 HDCP19113 662 aa22.09■■□□□ 1.13
SPCS3-203ENST00000507678 SEMA3AQ14563 771 aa22.09■■□□□ 1.13
SPCS3-203ENST00000507678 IRGCQ6NXR0 463 aa22.09■■□□□ 1.13
SPCS3-203ENST00000507678 TEX26Q8N6G2 289 aa22.09■■□□□ 1.13
SPCS3-203ENST00000507678 GABPB2Q8TAK5 448 aaPredicted RBP22.09■■□□□ 1.13
SPCS3-203ENST00000507678 TSPAN17Q96FV3 270 aa22.09■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms