RNA–Protein interactions for RNA: ENST00000507293.1

HMGCS1-204, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 1 (best)

Gene HMGCS1, Length 708 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-204ENST00000507293 PCSK4Q6UW60 755 aa11.61□□□□□ -0.55
HMGCS1-204ENST00000507293 CYP4V2Q6ZWL3 525 aaPredicted RBP11.61□□□□□ -0.55
HMGCS1-204ENST00000507293 GKN2Q86XP6 184 aa11.61□□□□□ -0.55
HMGCS1-204ENST00000507293 SDR16C5Q8N3Y7 309 aa11.61□□□□□ -0.55
HMGCS1-204ENST00000507293 PAF1Q8N7H5 531 aa11.61□□□□□ -0.55
HMGCS1-204ENST00000507293 PLA2G15Q8NCC3 412 aa11.61□□□□□ -0.55
HMGCS1-204ENST00000507293 WDR36Q8NI36 951 aaKnown RBP11.61□□□□□ -0.55
HMGCS1-204ENST00000507293 SCG3Q8WXD2 468 aaKnown RBP11.61□□□□□ -0.55
HMGCS1-204ENST00000507293 ECHDC3Q96DC8 303 aa11.61□□□□□ -0.55
HMGCS1-204ENST00000507293 SLC46A1Q96NT5 459 aa11.61□□□□□ -0.55
HMGCS1-204ENST00000507293 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP11.61□□□□□ -0.55
HMGCS1-204ENST00000507293 HAUS4Q9H6D7 363 aa11.61□□□□□ -0.55
HMGCS1-204ENST00000507293 CNOT8Q9UFF9 292 aaKnown RBP11.61□□□□□ -0.55
HMGCS1-204ENST00000507293 RABGEF1Q9UJ41 708 aa11.61□□□□□ -0.55
HMGCS1-204ENST00000507293 GPR34Q9UPC5 381 aa11.61□□□□□ -0.55
HMGCS1-204ENST00000507293 PCDHGA8Q9Y5G5 932 aa11.61□□□□□ -0.55
HMGCS1-204ENST00000507293 CFAP69A5D8W1 941 aa11.6□□□□□ -0.55
HMGCS1-204ENST00000507293 CDRT15L2A8MXV6 281 aa11.6□□□□□ -0.55
HMGCS1-204ENST00000507293 NTN3O00634 580 aaPredicted RBP11.6□□□□□ -0.55
HMGCS1-204ENST00000507293 RECQL5O94762 991 aaPredicted RBP11.6□□□□□ -0.55
HMGCS1-204ENST00000507293 TNFSF15O95150 251 aa11.6□□□□□ -0.55
HMGCS1-204ENST00000507293 TNFP01375 233 aa11.6□□□□□ -0.55
HMGCS1-204ENST00000507293 FTLP02792 175 aaPredicted RBP11.6□□□□□ -0.55
HMGCS1-204ENST00000507293 ELFN1P0C7U0 828 aa11.6□□□□□ -0.55
HMGCS1-204ENST00000507293 SKOR1P84550 965 aa11.6□□□□□ -0.55
HMGCS1-204ENST00000507293 BCL2L1Q07817 233 aa11.6□□□□□ -0.55
HMGCS1-204ENST00000507293 IL10RBQ08334 325 aa11.6□□□□□ -0.55
HMGCS1-204ENST00000507293 RFTN1Q14699 578 aaPredicted RBP11.6□□□□□ -0.55
HMGCS1-204ENST00000507293 ANO6Q4KMQ2 910 aa11.6□□□□□ -0.55
HMGCS1-204ENST00000507293 E4F1Q66K89 784 aaPredicted RBP11.6□□□□□ -0.55
HMGCS1-204ENST00000507293 LIPIQ6XZB0 460 aa11.6□□□□□ -0.55
HMGCS1-204ENST00000507293 ZNF571Q7Z3V5 609 aaPredicted RBP11.6□□□□□ -0.55
HMGCS1-204ENST00000507293 B3GNT8Q7Z7M8 397 aa11.6□□□□□ -0.55
HMGCS1-204ENST00000507293 TP53INP2Q8IXH6 220 aa11.6□□□□□ -0.55
HMGCS1-204ENST00000507293 LSM14AQ8ND56 463 aaKnown RBP11.6□□□□□ -0.55
HMGCS1-204ENST00000507293 FNIP1Q8TF40 1166 aa11.6□□□□□ -0.55
HMGCS1-204ENST00000507293 OR1E3Q8WZA6 343 aa11.6□□□□□ -0.55
HMGCS1-204ENST00000507293 FUBP1Q96AE4 644 aaKnown RBP11.6□□□□□ -0.55
HMGCS1-204ENST00000507293 ZNF653Q96CK0 615 aa11.6□□□□□ -0.55
HMGCS1-204ENST00000507293 RBM15Q96T37 977 aaKnown RBP eCLIP11.6□□□□□ -0.552e-7■■■■□ 25.6
HMGCS1-204ENST00000507293 DPH1Q9BZG8 443 aa11.6□□□□□ -0.55
HMGCS1-204ENST00000507293 FGF22Q9HCT0 170 aa11.6□□□□□ -0.55
HMGCS1-204ENST00000507293 RTN4Q9NQC3 1192 aaKnown RBP11.6□□□□□ -0.55
HMGCS1-204ENST00000507293 ARHGEF17Q96PE2 2063 aaPredicted RBP11.59□□□□□ -0.55
HMGCS1-204ENST00000507293 TMEM202A6NGA9 273 aa11.59□□□□□ -0.55
HMGCS1-204ENST00000507293 A8MX80 341 aa11.59□□□□□ -0.55
HMGCS1-204ENST00000507293 D6RAR5 112 aa11.59□□□□□ -0.55
HMGCS1-204ENST00000507293 ERVH48-1M5A8F1 160 aa11.59□□□□□ -0.55
HMGCS1-204ENST00000507293 CACNB4O00305 520 aaPredicted RBP11.59□□□□□ -0.55
HMGCS1-204ENST00000507293 DDX3XO00571 662 aaKnown RBP eCLIP11.59□□□□□ -0.551e-15■■□□□ 13.2
HMGCS1-204ENST00000507293 LRCH4O75427 683 aa11.59□□□□□ -0.55
HMGCS1-204ENST00000507293 MBD3O95983 291 aa11.59□□□□□ -0.55
HMGCS1-204ENST00000507293 RPLP0P05388 317 aaKnown RBP11.59□□□□□ -0.55
HMGCS1-204ENST00000507293 GM2AP17900 193 aa11.59□□□□□ -0.55
HMGCS1-204ENST00000507293 MLLT3P42568 568 aaPredicted RBP11.59□□□□□ -0.55
HMGCS1-204ENST00000507293 SCNN1BP51168 640 aa11.59□□□□□ -0.55
HMGCS1-204ENST00000507293 KIAA1024LP59773 190 aa11.59□□□□□ -0.55
HMGCS1-204ENST00000507293 AP1S1P61966 158 aa11.59□□□□□ -0.55
HMGCS1-204ENST00000507293 CCL7P80098 99 aa11.59□□□□□ -0.55
HMGCS1-204ENST00000507293 RHDQ02161 417 aa11.59□□□□□ -0.55
HMGCS1-204ENST00000507293 VAC14Q08AM6 782 aa11.59□□□□□ -0.55
HMGCS1-204ENST00000507293 NSUN2Q08J23 767 aaKnown RBP eCLIP11.59□□□□□ -0.55
HMGCS1-204ENST00000507293 DPYSQ14117 519 aa11.59□□□□□ -0.55
HMGCS1-204ENST00000507293 TAF1BQ53T94 588 aaPredicted RBP11.59□□□□□ -0.55
HMGCS1-204ENST00000507293 TMCO4Q5TGY1 634 aa11.59□□□□□ -0.55
HMGCS1-204ENST00000507293 DPPA4Q7L190 304 aa11.59□□□□□ -0.55
HMGCS1-204ENST00000507293 CLEC14AQ86T13 490 aa11.59□□□□□ -0.55
HMGCS1-204ENST00000507293 PSTKQ8IV42 348 aaKnown RBP11.59□□□□□ -0.55
HMGCS1-204ENST00000507293 ARL14Q8N4G2 192 aa11.59□□□□□ -0.55
HMGCS1-204ENST00000507293 OR56A4Q8NGH8 313 aa11.59□□□□□ -0.55
HMGCS1-204ENST00000507293 CCDC97Q96F63 343 aaPredicted RBP11.59□□□□□ -0.55
HMGCS1-204ENST00000507293 LIN37Q96GY3 246 aaPredicted RBP11.59□□□□□ -0.55
HMGCS1-204ENST00000507293 NSMCE3Q96MG7 304 aa11.59□□□□□ -0.55
HMGCS1-204ENST00000507293 GFM1Q96RP9 751 aaKnown RBP11.59□□□□□ -0.55
HMGCS1-204ENST00000507293 NAT10Q9H0A0 1025 aaKnown RBP11.59□□□□□ -0.55
HMGCS1-204ENST00000507293 EPB41L5Q9HCM4 733 aa11.59□□□□□ -0.55
HMGCS1-204ENST00000507293 MRPL40Q9NQ50 206 aaKnown RBP11.59□□□□□ -0.55
HMGCS1-204ENST00000507293 CWC15Q9P013 229 aaKnown RBP11.59□□□□□ -0.55
HMGCS1-204ENST00000507293 MYO1AQ9UBC5 1043 aa11.59□□□□□ -0.55
HMGCS1-204ENST00000507293 SEPT3Q9UH03 358 aa11.59□□□□□ -0.55
HMGCS1-204ENST00000507293 DGKBQ9Y6T7 804 aa11.59□□□□□ -0.55
HMGCS1-204ENST00000507293 SCINQ9Y6U3 715 aa11.59□□□□□ -0.55
HMGCS1-204ENST00000507293 UNC13CQ8NB66 2214 aa11.58□□□□□ -0.56
HMGCS1-204ENST00000507293 A0A1W2PQM1 296 aa11.58□□□□□ -0.56
HMGCS1-204ENST00000507293 TTC24A2A3L6 582 aaPredicted RBP11.58□□□□□ -0.56
HMGCS1-204ENST00000507293 B4DGG1 531 aa11.58□□□□□ -0.56
HMGCS1-204ENST00000507293 H3BRJ5 948 aa11.58□□□□□ -0.56
HMGCS1-204ENST00000507293 TRAFD1O14545 582 aaPredicted RBP11.58□□□□□ -0.56
HMGCS1-204ENST00000507293 ITGA2BP08514 1039 aa11.58□□□□□ -0.56
HMGCS1-204ENST00000507293 GZMAP12544 262 aa11.58□□□□□ -0.56
HMGCS1-204ENST00000507293 KELP23276 732 aa11.58□□□□□ -0.56
HMGCS1-204ENST00000507293 PRKCIP41743 596 aa11.58□□□□□ -0.56
HMGCS1-204ENST00000507293 HCAR3P49019 387 aa11.58□□□□□ -0.56
HMGCS1-204ENST00000507293 RENBPP51606 427 aa11.58□□□□□ -0.56
HMGCS1-204ENST00000507293 ZNF135P52742 658 aaPredicted RBP11.58□□□□□ -0.56
HMGCS1-204ENST00000507293 INHBCP55103 352 aa11.58□□□□□ -0.56
HMGCS1-204ENST00000507293 POLR2LP62875 67 aaKnown RBP11.58□□□□□ -0.56
HMGCS1-204ENST00000507293 CFHR1Q03591 330 aa11.58□□□□□ -0.56
HMGCS1-204ENST00000507293 KLHL30Q0D2K2 578 aa11.58□□□□□ -0.56
HMGCS1-204ENST00000507293 SLC10A7Q0GE19 358 aa11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms